Clinocottus analis (woolly sculpin): 137788552
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Entry
137788552 CDS
T10471
Symbol
abca4a
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4a isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137788552 (abca4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137788552 (abca4a)
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137788552 (abca4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_22
AAA_23
MukB
AAA_15
Motif
Other DBs
NCBI-GeneID:
137788552
NCBI-ProteinID:
XP_068437505
LinkDB
All DBs
Position
Unknown
AA seq
2324 aa
AA seq
DB search
MGAGREVKLLLWKNWTIRRRQRVRFFMEIMWPVMLFMGLVWLRRVNPLYRQHECHFPNKA
MPSTGVLPWIQGIFCNANNPCFQYPTRGESPGLVSNYNNSILARFYTDAQELLFSDPEFL
QLGRLWKELNAMSNFMDTLRTRPEQVSGRGVKVETILKDDETLTSYLLRDIPLTESVVYQ
LVNAQIRPEQFVFGVPALHLKDIACSLTLLERFLIFPSRRGLYAVRNAMCILTPQRLQII
EDKFYANVDFFKLFRLLPRVLDNHSGGIEIQVWVQVVSAVSDKLRELHQRNSSRELLQVL
TPLFQNNLSFREVMATASSLVCGYTEGAFSRVTSFNWYEDNNYKAFLGISGHRASQYTYD
NSTTPFCNDLMKDMESNPATRIVWNSVKPMLMGRILYAPDSQAARQIIRNANTTFEELER
LRTMGKAWEEVAPQIWAFFQDGVQVNMIRDTICNPSVMDFIDRSLEEAPFSSKHILNFLY
NGPPEDRPADVPDFDWRDIFNLTDRFIRTLNQYGDCVLLDKFVPVPDEDTVTYWALDLME
DSKFWAGLVFVNMHTWTTNVPPHVKFKIRMDVDAVERTNKVKDRYWDPGPRADPMDDFRY
IWGGFAYLQDIIEHGIIKTQTGKEWPLGVYLQQMPYPCYVDDLFMLTLNRCFPIFMVLAW
VYSVSMIVKSIVLEKELRLKETLKAIGVTNGVIWSTWFIDSFLMMGTSTALLTAIIMGGR
VLNYSNGIILFLFLLTFTMATIMQCFLLSVFFNQANLAAACCGIIHFALYLPHIFCFAWQ
DHITKDMKILVSLLSQVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEGDEFSFLTSICMM
GLDTVLYAVLAWYLDNVFPGQYGIGRPFYFPLLPCYWLNSVAPASDNNKLEMDTKGVDNV
TNKEQGEQQKQEEEENQDQEKDQEKPKTLEETGSCVHPDQGERESQAEENQIIDGQPFFE
AEPAELVKGVCIQNLVKVFGSSITPAVDGLSINFYESQITALLGQNGAGKTTTMSILTGM
FPPTSGTATIYGKDIRTDMDNIRQSLGMCPQYNTLFQHMTVAEHILFYSLLKGRPIAEAK
EEVENMLQDLGLPHKRDELTQNLSGGMQRKLSVALAFVGGAKVVILDEPTSGVDPYSRRS
IWDLLLKYRAGRTVIMSTHHMDEADLLSDRVAIVSQGRLCCCGSPIFLKNCFGAGFYLTL
VRRMKDNTPKASCDRTDDCSCTCSKCSKFKVGQEESQPQDREMDGDMDSITALIHHHVPQ
ARLIETIGQEMTYLLPNRNFQPRAYASLFRELEETLLDIGLGSFGVSDTSLEEIFLKVTA
NGNATNRKCVPDKKSLRQICRASLCGFNRVAVDMEPPKETDGALHTNGRGPCDVPGGTAG
RGSHQVRGLCLIIKQFFALLIKRLHHATRSYKDFFAQIVLPASFVFLALTFTLIVPPFGE
YQSLTLSPWMYGKQYNFFSNERPMDAQMRYFGKVLLDKPGFGTRCMVDEPLEDFPCNNIT
TQWEMPMVNPVLIDMLDSQKWNFLKPSPDCQCSTSRKLTMLPVCPAGAGGLPPPQRIQST
GDVLMDLTGRNISDYLVKTYPSLIRISLKSKYWVNEQRYGGISVGGQLPVLEVQPKTIQD
LAAQLGRLLNVTGGKYSKQTLKDIGTFLRYMETQDNVKVWYNNKGWHAMVSFMNVANNAI
LRANLPKGANLDEYGITAINHPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPASFV
LYLIQERVTQAKHLQFVSGVSPLVYWMANFLWDMLNYSISAAMVVEIFLFFDKKCYTSPT
NLQPLISLLMLYGWSVTPMMYPMSFVFSVPSTAYVSLSCINLFIGINSSAITFILDLFES
TTALYKFNQLLKSVLLIFPHYCLGRGLIDMAMHQAVTDIYARFGEDYRADPYNWDFIGKN
LFCMAVEGFVYFILNILFQYRFCMDHWVSDRPKPPILEEDVDVAEERERLDRSGKTNDIL
RIRDLSKTYTGTLIPAVDRICVAVSPGECFGLLGVNGAGKTTTFKMLTGDIDVTSGEASV
AGHSILSNILDVHQNMGYCPQFDAVDELLTGREHLHLYARLRGVPELEISRVAEWAIQKL
GLSEYAGQSVGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPLSRRFLWNSIMSVIQ
DRRAVVLTSHSMEECEALCTRLAIMVNGSFKCLGTIQHLKYKFGDGYVVTMKIRAAKPGC
APDLNPAEAFMESTFPGCIQSEKHYNTLQYKISSSSLGRIFQMVLANKDELKIEDYSVSQ
TTLDQVFVNFAKQQSREDDIIVLHPKAAGAQRCIEAKPFKSLEK
NT seq
6975 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaggaagagaggtcaaactcctgctgtggaagaactggaccatccgcaggagg
cagagggtgcgtttcttcatggagattatgtggcctgtcatgctgttcatggggctagtg
tggctgagacgagtgaatccactctaccgtcaacatgaatgccacttccccaacaaggcc
atgccctccacaggggtcctgccatggatccagggaatcttctgtaatgccaacaaccct
tgttttcaataccccacccgcggggaatctcccggcctggtgtccaactacaacaactca
atattggctcggttctacacggacgcccaggagcttctctttagtgacccagagtttctg
cagctcgggcgcctctggaaagaactgaacgctatgagtaacttcatggacaccctgcgc
acccgtcctgaacaggtctcaggccgaggagtaaaggtggagacgatcctgaaggacgat
gagactctgacatcatacctgctgagagacattcctctgacagagtcagtggtgtatcag
ctagtcaatgcccaaatcaggcctgaacagtttgtctttggggttccagctttgcatcta
aaggacattgcctgcagtctaaccctgctggagcgattcctcatcttccccagccgcaga
ggactctacgctgtccgcaatgcgatgtgcatccttacccctcaacggctacagatcatc
gaggacaaattctatgcgaatgtcgactttttcaaactcttcagactgcttcctcgtgtg
ctggataatcactctggaggcattgaaattcaagtctgggtacaggtcgtctctgctgtc
tcggacaaactgcgagagttgcaccagaggaatagctccagggagctcctccaggtcctg
actcctctcttccagaacaatctgtccttcagggaggtgatggccaccgcctccagcttg
gtatgcggctacactgagggcgcgttctcccgagtcacctcctttaactggtacgaggat
aataactacaaagccttcctgggcatcagcggccacagggcgagccagtacacatacgac
aacagcaccactcctttctgcaatgatctgatgaaagacatggagtccaaccccgccacc
aggattgtgtggaactctgtgaagccgatgctgatgggacgaatcctctacgctcctgac
tcgcaagctgcccggcagataatacgaaatgcaaacacaacatttgaggagctggagagg
ctgaggacgatggggaaggcctgggaggaagtggctcctcagatctgggcatttttccaa
gatggagttcaagtcaacatgatccgggacaccatctgcaatccatcggtgatggatttc
attgacaggagtctagaggaggccccattctcctccaaacacatcctcaacttcctgtac
aacggccctccagaggaccgtccggccgacgttcctgattttgactggcgggacatcttc
aacctcactgaccggttcattcgaacactcaaccaatatggggattgtgtgcttctggat
aagtttgtgcctgtgcctgacgaggacaccgtcacttattgggccttggacttgatggag
gacagcaagttttgggcgggccttgtctttgtaaatatgcacacttggaccaccaatgtc
ccgcctcatgttaaattcaagatccgcatggacgttgatgcagtggagcgcaccaacaag
gtcaaagacaggtattgggatcctggccccagagctgatcctatggacgacttccgctat
atttggggcggctttgcttacctccaggacataatagagcatgggatcatcaagacgcag
acgggaaaggagtggccactcggtgtttaccttcagcagatgccctacccttgctatgtg
gatgatctcttcatgctgacactgaaccgctgcttccccatcttcatggtcctggcctgg
gtctactctgtgtccatgattgtcaagagtatcgtcctggagaaggaactccggctgaag
gagaccctgaaggccattggggtcaccaacggcgtcatctggtccacctggtttattgac
agcttcctcatgatgggcactagcaccgctctcctcaccgccatcatcatgggaggaagg
gtactgaactacagcaacggcatcatcctcttcctttttttgctcacctttaccatggct
accatcatgcaatgcttcctcctcagtgtcttcttcaaccaggccaacctggcagcagcc
tgctgcggcatcattcactttgccctttacctcccgcacatcttctgcttcgcctggcaa
gaccacatcaccaaggacatgaagatcttggtgagtctgttgtcccaagtggcgtttggc
tttgggacagagtacctgtcgcggtacgaagagcagggcctgggtctgcagtgggacaac
atccagaccagccctctggagggggacgagttctcctttctcacctccatctgcatgatg
ggcctggacactgtgctgtacgccgtgctggcctggtacctggacaatgtatttcctggc
cagtatggaattggtcgaccattttacttccccctcctgccctgttattggctcaacagt
gtggctcctgcttcagacaacaacaaactggagatggatacaaaaggcgtcgataacgtg
acaaacaaagagcaaggagagcagcagaagcaagaggaggaggaaaaccaagatcaagag
aaagaccaggagaaacccaagactctggaagagacaggctcatgtgttcacccggatcag
ggggagagggagagccaggcagaggagaaccagatcatagacggtcagccattctttgaa
gcagagccagctgaactggtgaagggagtctgtatccagaacctggtcaaggtgtttggc
agtagcatcacaccggctgtggacggcctgagcatcaacttttatgagagccagattact
gcccttctgggtcaaaatggtgctgggaagaccaccaccatgtccatcttgaccggtatg
ttccctcccacctcagggacagccaccatctatggcaaggacatccgcacagacatggac
aacatccgccagtctctgggaatgtgtcctcaatacaacaccctttttcagcatatgact
gtagcagagcatatcctcttctactcgctgttgaaaggccgtccaatagcagaggccaag
gaggaggtggagaacatgctgcaggatctgggtctcccccacaagagagatgaactgact
cagaacctttcaggcggcatgcagaggaagttatctgttgccttggcatttgtcggtggg
gccaaggtggtgatcctggatgagcccacttcaggagtggacccctactccaggcgctcc
atttgggacctgctgctcaaataccgtgcaggccgcacggtgatcatgtccacccaccac
atggatgaagcggacctgctcagtgacagggtggctatcgtgtctcagggacgcctctgc
tgctgcggttctcccatcttcctcaagaactgttttggcgctggcttctacctcactctc
gtacgacgaatgaaagacaatactccgaaggccagctgtgatcgtacagatgattgctcc
tgtacatgttcaaagtgttcaaagttcaaagtgggccaggaagagagccagcctcaagac
agagagatggatggtgacatggatagcatcacggccctgatccaccatcacgtgccacag
gctcgtctcatcgagaccatcggccaggagatgacctacttgctgccaaacagaaacttc
cagcccagagcctacgccagcctcttcagggagctggaggaaaccctgctggacatcggc
ctcggcagctttggtgtgtctgacacatcgctggaggagattttcctaaaggtcactgct
aatgggaatgcaaccaacaggaaatgtgtaccagacaagaaatcattgcgacagatctgt
cgagctagtctctgtggattcaacagagtggctgttgatatggaaccaccaaaagagaca
gatggggctttgcacaccaatggtcgtggcccgtgcgatgtcccgggaggtacagcaggc
aggggatcccaccaggtcagaggattgtgtctcatcatcaaacagttctttgctctgctg
atcaagaggttgcatcatgcaacacgctcctacaaagacttctttgcccagatcgtgctg
ccagccagttttgttttcctggccctgaccttcacgctgatcgttccacctttcggagag
tatcaaagcctgactctcagtccctggatgtatgggaagcagtataacttcttcagtaat
gagcgtcctatggatgctcagatgagatactttggtaaggtgctgttggacaagcctggc
tttgggactcgttgcatggtggatgaaccactggaagatttcccatgcaacaacatcacc
acgcagtgggagatgcccatggtgaaccctgtgctgatagacatgctggacagccaaaag
tggaacttcctaaaaccgtctccagactgtcagtgcagcacatccaggaaactcaccatg
ctccccgtgtgtcctgcaggagccggaggcctgccacctccacagaggatccagtcaaca
ggagatgttctcatggacctaacaggcagaaacatctctgactacctggtgaagacctac
cccagcctcatcagaatcagcttgaagagcaaatattgggtgaacgaacaaaggtatgga
ggtatatcagtgggaggacagcttcctgttttagaggtgcagcccaagaccatccaggat
ctagcagcacagctgggtcgactgctcaatgtcactgggggcaaatactctaaacaaaca
ctgaaggacatagggacattcctcaggtacatggagactcaagacaatgtcaaggtgtgg
tacaacaacaagggctggcatgccatggtgtctttcatgaacgtggccaacaacgccatc
ctgcgtgcaaacctgcccaaaggagccaacttggacgaatatggaatcactgccatcaac
catcctctcaacctcaccaaagagcagctgtctgagatcactgtcctgaccacctcagtg
gatgcagtggtggccatctgtgtcatctttgccatgtcctttgttccagccagctttgtc
ctctatttgattcaggagagggtcacccaggccaaacacctgcagtttgtcagtggcgtc
agtcctttggtttactggatggccaactttctctgggacatgttaaattactccatcagt
gcagcgatggtggtggaaatattcctcttttttgataagaagtgctacacctctccaacc
aacctccaaccacttatttctctgcttatgctttatggatggtccgtgacacccatgatg
taccccatgtccttcgtattcagtgtccccagcacagcctacgtctctttgtcatgtatc
aacctcttcattggcatcaacagtagtgccatcaccttcatcctggacctttttgagagc
accacagctctgtacaagttcaaccagctgttaaagtctgtgctgctcatcttcccccat
tactgcctgggccgaggtctcattgatatggccatgcaccaggctgtgactgatatctac
gctcgctttggtgaggactacagagcagacccctataactgggactttattgggaagaac
ttattctgcatggctgttgagggatttgtctatttcatcctgaacattttgttccagtat
cgcttctgcatggatcactgggtatcagaccgcccaaagcctcctattttggaagaagat
gtcgatgtggcagaggaaagagagcgactcgataggagtggaaaaacaaacgacatttta
cgcattcgagacctgtccaagacatacacaggaacactgatccctgcagtggaccggatc
tgcgttgcagtatcacccggagagtgctttggtctactgggagtgaatggagcaggaaag
accacaacatttaaaatgttgactggagacattgatgtcacctcaggagaggcctcagtc
gctggtcacagcattttatccaatatcctggacgtccaccagaacatgggatactgccca
cagtttgatgccgtagatgagctgctgacaggcagagaacatctgcacctctatgcccgc
ctccgtggagttcctgagttggagatcagccgggttgcagagtgggccatccagaagctg
ggtctgtccgagtatgcaggccaaagcgttgggacctacagtggaggcaacaagaggaaa
ctctccacagccattgccatgataggctgccctgcactggtgctgctggatgagcccaca
acaggtatggaccctctctccagacgcttcctgtggaactccatcatgagcgtcatccag
gatcgccgagctgtggtcctcacctcacacagtatggaggaatgtgaagcgctgtgtacc
cgcttagcgattatggttaatggatcctttaagtgtttgggaaccattcagcatcttaag
tacaagtttggtgatggctacgtggtgaccatgaagatcagggcagctaagcccgggtgt
gctcctgatctgaaccctgccgaagccttcatggagagcaccttccccggctgcatccag
agcgagaaacactacaacactctgcagtacaagatctcctcctcctccctggggaggatc
tttcaaatggtcctggctaacaaagacgagctcaagatagaagactactcagtgtcacag
accactcttgaccaggtttttgtgaattttgccaagcaacagtcaagagaggatgacatc
attgtgttgcacccaaaagctgccggagcacagcggtgtattgaagccaaacccttcaag
tctttggagaagtga
DBGET
integrated database retrieval system
