Clinocottus analis (woolly sculpin): 137788617
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Entry
137788617 CDS
T10471
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137788617 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137788617 (u2surp)
Spliceosome [BR:
cana03041
]
Complex A
U2 snRNP components
U2 related factors
137788617 (u2surp)
Complex B
137788617 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
DUF2408
RRM_7
Motif
Other DBs
NCBI-GeneID:
137788617
NCBI-ProteinID:
XP_068437639
LinkDB
All DBs
Position
Unknown
AA seq
960 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGDGKVKAFVRGGIANASKEEAAADEKKGKLYKPKSRFDNQTKGLLPLDTPPQF
LALDKRNPVKKNTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLSGADGRRS
VLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERAR
ERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLPP
PPSGLPFNAQPRERLKNPTAPMLPPPKNKEEFEKTLSQAIVKVVIPTERNLLSLIHRMIE
FVVREGPMFEAMIMNREINNAMYRFLFENQSPAHVYYRWKLYTILQGEAPVKWKTEDFRM
FKNGSLWHPPPLNPYLHGPYDDGEEEEEDEDGSRKGCLKVDERDKLEEMLRAMTPRRGDI
AEAMLFCLGRAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLYNSSAKVSNASYYR
KYFETKLCQVFADLNATYKSIQGHLQSENFKQRVMACFRAWEDWAVYPDPFLIKLQNIFL
GLVNLAAEKEPPVVIVEAEQAEDIDGAPIGEYGDETLLEDVDGVPIDAGPIDGAPIDGAP
LDDLDGVPIKPMEEDIDGIPLDPSKDATFKVAPSKWEAVDDTELQAQAVTTSKWEAFEQP
EETKKDEEDSDYDDRSPRSDDNQSYSNPIREDSDIKAKMSEMNEEKRTKLREIEVKVMKF
QDELESGKRPKKPGQSLLEQVEHYRDKLLQKEKEKEKLEREKEKEKKEKEKAEARLNALK
KEKEKDDTPTRKERKRRHSGSPSPTRSSTRRGRSSSPRSERSEKSERSDRSYSKDTSSRS
THKDSPRASNKKSSKRSPSPRTPKRSRRSRSKTPKKSTKKSRSKSKSPHRSHKKSKKSKH
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaacgcctggtggttctcagaaagctagcgcgaaggcgttgcttgagagc
aaattgaagtcgttcagcattggcaaaatggcagtggcaaagaggaccctaagcaagaag
gaacaagatgaaataaagaaaaaagaggatgagcgggcagcagcagagatttatgaggag
tttcttgctgcttttgaaggaggggatggcaaagtcaaggcctttgtccgtggtggtatt
gcaaatgcatcaaaagaggaggctgctgcggatgagaagaaaggaaaattgtacaagccc
aagtcacgttttgataaccaaacaaaaggccttttgcctctggataccccacctcagttt
ttagcattggacaaaagaaatcctgtaaagaaaaatactgagaaggaaaaaaagaagagc
aacctggagctcttcaaagaagaactaaaacaaatacaggaagaaagggatgaaagacac
aagctgaaaggacgcgttagtcgcttcgaacctctctcgggcgcggatggaagacgctca
gttttggatgattgtgcgccaggttcccatgatgttggagacccatccactaccaacttg
tatctcggaaacatcaatccacagatgaatgaggagatgctgtgtcaagagtttggccgt
tatggtccgctggccagtgtgaagatcatgtggccgagaacggacgaggagagggctcgg
gagaggaactgtggttttgtggctttcatgaacaggagggatgctgagagagcactcaag
aacctaaatggaaagatgataatgaactttgagatgaaattaggatggggcaaaggagtg
cccatcccaccccacccaatctacatccctccttccatgatggagcacacacttccccca
cctccctctggcctacccttcaatgcacagccccgggagaggctaaagaaccccaccgct
cccatgcttcctccacctaaaaacaaggaggagtttgagaagactctgtcgcaagccata
gtcaaagtggttatcccaacagaaaggaatttactctctctcatccaccgaatgatcgag
tttgtggtgcgtgaaggcccaatgtttgaagccatgatcatgaacagagaaatcaacaat
gctatgtacaggtttctatttgagaaccaaagcccagcacatgtatactatcggtggaag
ctctacaccatactacagggtgaagcaccagttaaatggaaaacagaggactttaggatg
tttaagaatggctccttatggcatccgcctcctcttaatccatacctccatggtccttat
gatgacggtgaggaagaggaggaagacgaggacgggagcaggaaaggctgcttgaaagtg
gacgagcgggacaaactagaggagatgcttcgtgctatgacgcccaggaggggagacata
gcagaagccatgttgttttgtctcggccgtgctgaagccgctgaagagattgtggagtgc
gtcacggagtctctctccatcctcaaaacccctcttcccaagaagattgctcggttatat
ctagtttctgacgtgctgtacaactcttctgccaaagtgtccaatgcgtcctactacaga
aaatattttgagacgaagctctgccaggtttttgctgacctcaacgcaacatacaaatcg
atacagggccaccttcagagcgagaactttaagcaaagagtcatggcgtgtttccgggca
tgggaggactgggctgtgtacccagaccccttcctcatcaagctgcagaacatcttcctg
ggtctcgttaatctcgctgcagagaaggaaccccctgtcgtcattgtggaggctgagcaa
gcagaggacattgatggggctccaatcggggagtacggagatgaaactctgctggaggac
gtggacggggtgccgattgacgccgggcccattgatggagctcctattgacggagcgccc
ctagatgacctagatggtgtgcctatcaagccaatggaagaagacatagacgggatacct
ttggatccgtccaaggatgcaaccttcaaagtagcaccctcaaaatgggaggcagtggat
gatacagagttacaagctcaagctgtgacaacttcaaaatgggaggcatttgagcagcca
gaagaaacaaaaaaggacgaggaggacagtgactatgatgacaggagccctcgatcggat
gataatcagagctactcaaaccccatcagagaggactcggacatcaaggccaaaatgtct
gaaatgaacgaggagaaacgcacaaagctcagagaaatagaggttaaggtcatgaagttc
caggatgagctggagtctggaaaacggccgaagaagcctgggcagagtcttctggagcag
gtggaacactacagggacaaattactacaaaaggaaaaggaaaaagagaaacttgaacgg
gagaaagagaaggagaagaaagagaaggagaaagctgaggctcgtttgaacgctttgaaa
aaggaaaaagaaaaggacgacacgccaaccaggaaagaaaggaagcggcgtcacagcggg
tcaccgagtccaacaaggagtagcacccgacgaggccggtcatcctcaccccgttcagag
cggtccgaaaaatcagaacgctccgaccgctcgtactctaaagacacatcttcccgctcc
acccataaagactccccgcgagcaagcaacaaaaaatcctcaaagagatcaccctcacct
cgcacacccaaacgatccaggaggtcgcgctccaagacgcccaagaaatcgacaaagaag
tcccgctccaaatcaaagtcaccgcaccggtctcataaaaaatcaaagaagagcaaacac
tga
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