Clinocottus analis (woolly sculpin): 137788760
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Entry
137788760 CDS
T10471
Symbol
gli3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
137788760 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137788760 (gli3)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
137788760 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
137788760
NCBI-ProteinID:
XP_068437932
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
METHSHASSAAEKKKRVETIVATKGSSARNDISEKAVASSTTSNEDESSGTPYHRERRNA
ISSHAPRGSDRTVSEEPSTSTEERPSLLKKELHGSLPHLADHGLPYRGTLFAMDPRNGYL
DAHYPAPQFFPTFHPPVPIDDRHTQGRYIYEPSPVPPLHVPPGLAGSPAFSDISLIRISP
QRNPSVGAESPFHPPHPYINPYMDYIRSLHSSPSISVLSATRGLSPADAPHTGLTTAEYY
HQMALLAGHRSPYATDLLPSVASTAGVSGATALHMEYLQAMENSRFSSPRLPSRPSRKRP
LPISPLSEHSFDLQTMIRNSPNSLVTMLNNSRSSSSTSGSYGHLSAGAISPALSFAYPPT
PVALHVHQQLLGRQPGLVGSAFGHSPPLIHPSPAYATQRPVPGIPPSGLSASERSALSND
SSQTKPTSESAVSSTGDPMHHKRSKMKPEEELPSPGAVCVQDHPDGMTLVKEEGDKDESK
QEPEVVYETNCHWENCCREFDTQEQLVQHINNDHIHGEKKEFVCRWEECSREQKPFKAQY
MLVVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS
DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRPPP
PREHGGNGQGRSPGHLPLGGYTDQREYNHATSKQDECLQVKSIKTEKPMTSQPSPGGQST
CSSDQSPVSTYPCSGVQLAVSAGRSPGEGLEEDGEKGEMEEELEEDCVGVRAPIMDSTVS
TATAAMLTLQARRSVGRPLRWMEHIKMERLKQVNGVTPRLGALSPTPPPKGSTLPNILGK
GSCLGRQWGVSAPQPPAHAELSSTELTVLNLLRDRRDSSGSATSSAYLSSSRRSSGISPC
FSSRRSSQASQSEGTMTAAHHRRLHNLSSTDSYDPISTDASRRSSEASHYGGGTGGGGCG
ILTGGGCAGVGGVGVGGSRGMLTLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKTRM
AMMDEEGSNPLPPLVRPHCCSDGTNGYTNGYMGHAGYRRRVLYPGEGPLNGNRRASDPVR
TQARDIGSLPPVQRFNSLNNLNPLPPLTHHSTPETRSFSLQNYTRSEGNLQRGLQHSPYT
PSIAEHAALEALAMEDEAGLLLGDEDMLPDDLVQYLHSQVQVDGGSYMHIEDQIALSQRD
TSHPSMEEIEQIQTAGLNMGFTGSQQTEERTSPSKLPIQWNEVSSGSADRSPQKDQNHQT
QCGRWSGTEHGPASAPFGRFGNMVVQQQVPLDFQNSCAQVNQSQSACCVNPAVKLEALPN
SCMEMRGNNATNPFGRPNFAQIINGPPQQGSNGPPKQSHFQQNHNSSTSCQVGNNLILSR
ASLDVLPSLSQGTALHHNRQVHVPRPPDGYRNLVRTQQYLNPENSGEIQAGLDHCSLAHQ
VSGLKLEAPDNGYLEQGFGDCLSYNPLDRKASSFPVLEDQCLLNSMAESVGQVVGNSAGL
LSPGIDQVTSTMDGNVPGLLDEGVSLDFGAMLEDGFDQGSLVSGVLSPSIFQGMSRTSSR
LTTPRASAAFHSVAPGLNNMAIGDMSSLLTTLAEESKFLAIIQ
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccactcccatgccagttcagcagctgagaagaagaagagggtggagaccatc
gtggcgaccaagggctcatcagcgcgcaatgacatcagcgagaaggcggtggcctccagc
accacctcaaacgaggacgagagttcaggcacgccgtaccaccgcgagaggcgcaacgcc
ataagctcccatgcgccccgcggctcggacaggaccgtgagcgaggagccctccacctcc
acggaggagcgcccctccctgctcaagaaggagctgcacgggtccctgccccacctggcc
gaccatggcctgccgtaccgaggcaccctgttcgccatggacccccgcaacggctacctc
gacgcgcactacccggcaccgcagttcttccccaccttccatcctcccgtgccaatcgac
gacagacatacccagggacgttacatctacgagccttcccccgtgccccctcttcatgtg
cctcccgggttggcgggcagtccggccttctccgacatctccctcatccggatctcgccc
cagaggaacccctccgtgggggcggagtcgccctttcaccctccacacccttacatcaac
ccgtacatggactacatccgctcgctccacagcagcccctccatctccgtcctgtcggcc
acccggggcctcagccccgcagatgcccctcacacaggtctgaccacggccgagtactac
caccagatggccctgctggcgggccaccgcagcccctacgccaccgacctgctcccgtcc
gtggcgtccaccgccggcgtgagcggcgccaccgccctgcacatggagtacctgcaggcc
atggaaaactctcgtttctccagcccgaggctgccatcaaggcccagcaggaagcgcccg
ctgcccatctcgccgctctccgagcacagcttcgacctgcagaccatgatccgaaactcg
cccaactccctggtcaccatgctcaacaactcccgctccagctcgtccaccagcggctcc
tacggacacctctccgccggagccatcagcccggcgttgagcttcgcctaccctccgacc
ccggtggccctgcacgtgcaccagcagctgctcggccgccagccgggcctcgtgggctcc
gccttcggccacagcccgccgctcatccacccgtcgccggcctacgccacccagaggccc
gtacccggcatccccccctctgggctcagcgccagcgagcgctccgccctctccaacgac
tcctcacagaccaaaccaacgagtgaatctgcagtgagcagcacgggagacccgatgcac
cacaaacgctccaaaatgaaaccagaggaggagttgccgagcccgggcgccgtgtgcgta
caggaccatccggatgggatgaccctggtgaaagaggaaggggacaaggacgagagcaaa
caggagcccgaggtggtgtacgagacaaactgccactgggagaactgctgccgcgagttc
gacacgcaggagcagctcgtccaacacatcaacaatgaccacatccacggggagaagaag
gagtttgtgtgtcggtgggaggaatgttctcgggagcagaagcccttcaaggcgcaatac
atgctggtggtccacatgcgcagacacacgggggaaaagccccacaagtgcacattcgag
ggctgtgccaaggcctactcccgtctggaaaacctgaagactcacttgcgctcgcacacc
ggtgagaaaccctacgtgtgcgagcacgaaggctgcaacaaggccttttccaacgcgtca
gaccgggccaagcatcagaatcgcacacactcaaacgagaaaccgtatgtgtgtaaaatc
ccgggctgcaccaaacgctacacggaccccagctccttgcgcaagcacgtgaagacggtg
cacgggccggaggcgcacgtcaccaagaaacagcgcggagattacccgcgcccgccgccc
ccacgggagcacgggggcaacggccagggccgctcgccggggcatctgcctctgggtggg
tacacggaccaaagggagtacaaccatgctacctcaaaacaggacgaatgtctgcaggtc
aagtccatcaagacagagaagcctatgacgtctcagccaagccctggcggtcagtctaca
tgcagcagtgaccagtcccccgtcagcacctatccctgcagtggagtccagcttgctgtg
agcgccggacgctcgccaggggaggggctggaggaggacggggagaaaggggaaatggaa
gaggagttggaggaggattgcgtgggtgtgcgggcccccatcatggactccacagtctcc
acagcgaccgcggccatgctgaccctgcaggcgaggcggagcgtcggccgccccctgcgc
tggatggagcacatcaagatggagaggctaaagcaggtgaatggagtgacgcccaggctg
ggggccctgtcccctacaccgcccccgaaaggttccacactacccaacatcctggggaag
ggatcctgtctgggcaggcagtggggggtgtctgctcctcagccacctgctcacgctgag
ctgagcagcacagagctaacagtgctcaatttgctccgagaccggcgtgacagcagcggc
agcgccaccagttcggcctacctgagcagcagtcggcgctcctccggcatctccccctgc
ttctccagtcggcgctccagccaggcttcccagagcgagggcacgatgacggccgcccac
caccgccgcctccacaacctcagctccaccgactcttacgaccccatctccaccgatgcc
tcgcgccggtccagcgaggcaagccattatggaggtggcacgggaggagggggttgtggg
atactcacaggtgggggctgcgcaggtgtaggaggagtaggtgtgggagggtcgcggggg
atgctcactttaaccccagcacagcactaccacctgaaagccaagtatgccgcggcaact
ggcggcccacctcccacgcctcttcccaacatggagcgcatgagcttgaagactcgcatg
gccatgatggatgaggagggtagcaaccctttgccgcctctagtccggccacattgctgc
agcgatggcaccaacgggtacaccaacgggtacatgggacatgcaggttacaggaggcgg
gtcctgtatcccggcgagggaccactgaatggcaaccgcagggccagtgacccagtgcgg
acgcaggctcgtgatatcggcagtctgcccccagtgcaacgcttcaacagccttaacaac
ctcaaccctcttccaccactaactcatcattctacgcctgaaacgcgcagcttcagcctg
cagaactacacacgctcagagggcaacctgcagagaggcctgcagcactcgccatacact
ccgagcatcgccgaacacgcggccttagaagccctggccatggaggacgaggccggcctg
ttgctcggggatgaggacatgctgccggacgacctggtgcagtatctccactcccaggtg
caggtggacggtggctcctacatgcacattgaggaccaaatagctttgagccaaagggac
acctcccatccgtctatggaggagatagaacagatccagactgcagggttgaacatgggc
ttcactgggtcccagcagacggaagagaggaccagcccgagcaagcttcccatccagtgg
aatgaagtgagctccgggagtgccgacaggtcccctcagaaggaccagaaccaccaaaca
cagtgtgggaggtggtcaggcactgagcatggacccgcatctgcgccgtttggcagattt
ggaaacatggtggttcagcaacaggtgcccctcgatttccagaacagttgtgcccaggtg
aatcagtctcagagtgcttgttgtgttaaccccgcggtgaagctggaggcgctgcccaac
tcctgcatggagatgagaggtaacaacgctacgaaccccttcggaaggcccaacttcgca
cagattatcaacgggcctcctcagcagggctccaatggacctccgaaacagagccacttc
cagcagaaccacaacagtagcacctcttgccaggtcgggaacaacctgatcctcagcagg
gcctctctggacgtcctcccgagcctctcccagggaacagcgcttcatcacaaccggcag
gtccatgtccctcgtccaccggacggttacaggaacttggtcaggacccagcagtacctc
aacccagagaactctggtgagatccaggctggtctcgaccactgctcccttgcacatcag
gtatccgggctgaagctggaggccccagacaatgggtacttggagcagggctttggcgac
tgcctctcctacaacccattggatcgcaaggcctcctcgttcccggtcctggaggaccag
tgcttgctcaactccatggctgagtccgtgggccaagtggttggcaactcggccggcctc
ctctcccccggcatagaccaggtgaccagcacaatggacggcaatgtgcccggtctccta
gacgagggggtgagtctggactttggtgccatgctggaggatggctttgaccagggcagc
ctggtctcaggtgtgctgagtccctccattttccagggtatgtccaggacctcgtcgcgc
ctgaccacccctcgagcatccgcggccttccacagcgtggcccccggcttaaacaacatg
gcgattggggacatgagctctctcctcaccacgctggccgaggagagcaagttccttgct
atcattcagtag
DBGET
integrated database retrieval system
