Clinocottus analis (woolly sculpin): 137788794
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Entry
137788794 CDS
T10471
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137788794 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137788794 (smarcd3b)
03036 Chromosome and associated proteins [BR:
cana03036
]
137788794 (smarcd3b)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137788794 (smarcd3b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137788794 (smarcd3b)
PBAF complex
137788794 (smarcd3b)
GBAF(ncBAF) complex
137788794 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
137788794
NCBI-ProteinID:
XP_068437986
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSTVMEPSRKRPAPSQQVQQQQQQQQGGQSRSRKKPVGFPGANETPARQMDMREPQSDPT
LGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQ
QKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFKSLVIEL
DKDLYGPDNHLVESLCGGLLFQWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQF
KLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFS
EIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKGQMSSFLLSTANQQ
EIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEE
ERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccaccgtacggcgggagcccggcggtgcggcccggcctg
ccctccaccgtgatggagcccagccgcaagaggcccgccccctcccagcaggtccagcag
cagcagcagcagcagcagggcggccagagccggtccagaaagaagccggtcggattcccc
ggagccaatgagaccccggcgaggcagatggacatgagagagccccaatcagatcccacg
ctcggatcaaatgctaagagaaggaaaatggcagacaagattcttccgcaaaggatccgt
gagctggtgccggagtctcaggcctacatggatctgctggcgtttgagcgcaaactggac
cagaccatcatgcgcaagcgcgtggacatccaggaagcactgaagaggccgatgaagcag
cagaagcgtaaactgaggctttacatatccaacaccttcaacccggcgagacccgacgcc
gacgactcagacggcagcattgcatcgtgggaactgcgagtagaggggaagctgctcgat
gatccggggaagcagaagaagaagttctcttcgtttttcaagagcctggtgattgagctg
gacaaagacctctacggtcccgacaaccacctggtcgagtcactctgcggcggtttgctc
tttcagtggcaccgcacgcccaccacgcaggagacggacggcttccaggtgaagaggccg
ggcgacgtgagcgtgcgctgcactctgctgctgatgctggactaccagcctccccagttc
aagctggaccctcgcttggctcgcctgcttggcattcacacccagactcgctcctgcatc
atccaggccctctggcagtacgtcaagaccaacaagctgcaggactcccatgacaaggag
tacatcaactgtgacaagtacttccagcagatctttgactgccctcggctgaagttctct
gagatcccgcagcgcctcaccaacctcctcttgccccccgaccccatcgtcatcaaccac
gtcatcagcgtggatcccaacgaccagaagaagacggcctgctacgacatcgacgtggag
gtggaggaccccctgaagggccagatgagcagcttcctcctctccaccgccaaccagcag
gagatcgcctccctggacaacaagatccatgagaccatcgagtccatcaaccagctgaag
atccagagggacttcatgctcagtttctccagagatcccaagggctacatccaggactgg
ctcaaatcccagagccgagatcttaagttaatgacagacgtggtcgggaaccctgaagag
gagaggagggcggcgttttaccacgagccctggtcccaggaggccgtcagccgctatttc
tactgcaagatccagcagaggagacaggagctggaacaggccttggccgtccgcaacacc
taa
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integrated database retrieval system
