Clinocottus analis (woolly sculpin): 137788815
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Entry
137788815 CDS
T10471
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137788815 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137788815 (dis3l)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137788815 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
137788815
NCBI-ProteinID:
XP_068438029
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MIRTERVLHLKSCRGRKVRVVREHYLRERVPCYSALCQAGCEHRDAKVLPANLTHYVVPD
VGVVVDYLEVLEVPELQGVVFTQTACQAVQHSKGRRQYNRLRNLLKDPRHDCVLFANEFQ
EYSYCPREKGERQEKWQTRCVYSAAVWYYNHLAGVKDVVMLTEDQEAVAQYGSLNSGVYV
ISVRDFLQNFWPELQAAHELYSSVSQALQEKESEASERQYAEHLPAELLEAGIKSGRYIQ
GTLNISKHRALSEASITAEGLSNKNSDLGSGVLVSGTKNRNRAVHGDLVAVELLPKSEWR
GKDTALAEGRGEEPSGEGDRKPMATGRVVGILQRNWRDYVVTFPPREGPQPQTRNSQRIL
AVPWDHRIPKIRISTGQADALQDHRVVVRIDSWESTSLYPNGHSVRVLGRAGELETEVQT
ILVENCIHVPPFSEAQLREMPVNSPERPWAVDPAQAAQRRDLRESHLVFSIDPPGCEDVD
DTLSVRRLAGGTRIELGVHIADVTHFVAEGSLTDLEARARATTCYLADRRYDMLPAVLSG
DLCSLLGGVDRYAMSVMWELDAQTLAVASVWYGRTLVRSSYQLHYELAQALLDGRRAEVP
ELAGLEPAERDGRLARLVSALETLTRVARHLRAQRDQGGALELEGVEVRAQLDEERNITA
LVPRQPLEVHETVAECMIYANHWVARKIQEAFPHQALLRRHPPPRQEFFSQLVDTAAAKG
FTVDTRTNKALADSLDLAEDPRDPLVNRLLRIMATTAMSQALYFSTGLQAQDQFYHYGLA
LDRYTHFTSPIRRYADIVVHRLLSAAIAADRGSDPGRAVVSNKELEETAQHINNKNRAAQ
QAQKLSTELFQCLYFKERDPQADQLCLADAVIYSIRDNGVLAFVPEYGVKGPVYMKNREG
QVVAVGEDGVCEWQSGAVRRHPDCITTSSGRGTATFRLFDHITVRISVRSTHCHADALSL
EVVSNEPHRRAATAGAEPQPPAPARSQSRGSSQLVREVVRLAEEASQQAQEKAARRPKLS
REEREFSQTKTPNLYSLLEEVRELALLDAEAASRLCATTA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgatccggaccgagcgagtgctgcacctgaagagctgccgcggccgcaaggtgcgcgtg
gtgcgcgagcactacctgcgagagcgcgtgccctgctacagcgcgctatgtcaggcggga
tgcgagcaccgggatgccaaagtgctgccggcgaacctgacccactacgtggtgccggac
gtgggcgtggtggtggactacctggaggtgctggaggtcccggagctgcagggcgtggtc
ttcacgcagaccgcctgccaggccgtgcagcacagcaaaggccgcaggcaatacaatcgt
ctgagaaacctgctgaaggatcctcgacacgactgcgtgctgttcgccaacgagttccag
gagtattcgtactgcccccgagagaagggggagcggcaggagaagtggcagaccaggtgt
gtgtactcggcagcggtgtggtactacaaccacctggccggtgtgaaggacgtggtgatg
ctcacggaggaccaggaggccgtcgctcagtacggcagcctcaactccggagtctacgtc
atctctgtgcgggattttttgcaaaacttctggccggagcttcaggcggctcatgagctg
tacagctccgtctctcaggcgctgcaggagaaggagagcgaggcctcagagaggcagtac
gccgagcacctgcccgccgagctgctggaggccggaatcaagtccgggcgatacattcag
ggcacgctgaacatcagcaagcaccgagcgctcagcgaggcctccatcacggcggagggt
ttgtccaacaagaactcagatctgggttcgggcgtgttggtgagcggcaccaagaaccgc
aacagagccgtgcacggcgacctggtggcggtggagctgttgccgaagagcgagtggaga
gggaaggacacggctctggccgagggccggggggaggagccgagcggagagggcgacagg
aaacccatggcgacaggccgcgtggtggggatcctgcagaggaactggagggactacgtg
gtcaccttcccccccagagaggggcctcagccccagaccaggaactcccagcgcatcctg
gcggttccctgggaccaccgcatccccaagatccgcatcagcaccgggcaggccgacgca
ctgcaggaccacagagtggtggtgcgcatcgactcgtgggagagcacgtcgctgtacccg
aacggccacagcgtgagggttctgggtcgggccggcgagctggagacggaggtccagacc
atccttgtggagaactgcatccacgtgccgcccttctccgaggcccagctgagggagatg
ccggtgaactcccccgagaggccgtgggcggtggacccggcccaggcggcgcagcgccgc
gacctcagggagagccacctggtgttcagcatcgacccgccgggctgcgaggacgtggac
gacacgctgtcggtgcgccgcctcgccggggggacgcgcatcgagctcggggttcacatc
gctgacgtcacgcacttcgtggccgagggatcgctcaccgacctggaggcccgcgccagg
gctacaacgtgctacttggctgaccggcgctacgacatgctgcccgccgtcctcagcggt
gacctctgctccctgctgggtggagtcgacagatacgccatgagcgtgatgtgggagctc
gacgcccaaaccctcgccgtggcctcggtgtggtacggccgcacgctggtccgctcctcc
taccagctgcactacgagctggcccaggcgctgctggacggccggcgggccgaggtgccg
gagctggcggggctggagcccgcggagcgggacggccggctggctcggctcgtcagcgct
ctggagacgctgacccgcgtcgccaggcacctccgggcccagagggaccaaggtggagcg
ctggagctggaaggggtggaggtgcgagcccagctggacgaggagaggaacatcacggcc
ctggtcccccgccagccgctggaggttcacgagaccgtggccgagtgcatgatctacgcc
aaccactgggtggcgcgcaagatccaggaggccttcccccaccaggcgctgctgaggcgg
cacccgccgccacggcaggagttcttcagccagctggtggacaccgccgcggccaaagga
ttcaccgtcgataccaggaccaacaaggctctggcggactctctggatctggccgaggac
ccccgggacccgctggtgaaccggctgctgaggatcatggccacgaccgccatgtcgcag
gcgctgtacttctccaccggcctccaggctcaagaccagttctaccattacggactggcc
ctggaccgctacactcacttcacctcgcccatccgccgctacgccgacatcgtggtgcac
cgccttctctctgcggccatcgccgcggaccgagggtccgatcccggccgagcggtggtc
agcaacaaagagctggaggagacggctcagcacatcaacaacaagaaccgggctgcccag
caggcccagaagctgtccacagagctgttccagtgcctctacttcaaagaaagagaccct
caggcggaccagctttgcctggccgacgccgtcatctactccatccgagacaacggcgtg
ctggcgttcgtccccgagtacggcgtgaaagggccggtgtacatgaagaaccgggagggc
caggtggtggcggtgggagaggacggcgtctgcgagtggcagagcggcgccgtgcggcga
caccccgactgcatcaccacgtcctccggccgcggcaccgccaccttcaggctgtttgac
cacattaccgtccgtatctccgtgcgctcgacgcactgccacgcggacgctctgagcctg
gaggtcgtgagcaacgagccgcaccgtcgcgccgccaccgccggcgccgagccccagcca
ccggcgccggcccgctcacagagccgcggcagcagccagctggtccgggaggtggtgcgt
ctggccgaggaggcgtcccagcaggcccaggagaaggcggcccggcggcccaagctctcc
agagaggagagggagttcagccagaccaagacccccaacctgtactccctcctggaggag
gtccgggagctggctctgctggacgcggaggcggcttcacgcctctgtgccaccacggcc
tag
DBGET
integrated database retrieval system
