Clinocottus analis (woolly sculpin): 137789064
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Entry
137789064 CDS
T10471
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04144
Endocytosis
cana04517
IgSF CAM signaling
cana04520
Adherens junction
cana04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137789064
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137789064
09144 Cellular community - eukaryotes
04520 Adherens junction
137789064
04530 Tight junction
137789064
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137789064
Protein phosphatases and associated proteins [BR:
cana01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137789064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
137789064
NCBI-ProteinID:
XP_068438420
LinkDB
All DBs
Position
Unknown
AA seq
1382 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIHVHSLIEQAAMRYKKAIAKDPTYWVQVHRLEHGDGGILD
LDDMLCDVVDDKDRLVAVYEEQDPHNGGDGTSASSTGTQSPEPFSSDMSSASTFQPCQPN
SEIEVTPSSLRSNMPLHVRRSSDPSLVGLLPGEVGPEEPSRKNPTRWSTTAGFQKHNPKP
NTSTGSLEQKKSHAYRSLPRDTSGWTTQFQRETTRSSLSANHPMVDQWLDRQEQDEERRR
HERRIERIEPVGRADSSLEHGFSLAGLLKPVEVSNGGGPLGIHVLPLSSQDARTHGLLVK
RLERGGKAEQERLFQENDCIVKINQGDIRHLRFEQAQNIFKQAMRGPVILFHVVPAAMKR
QYELLTAQTELSPPQLNRVRFSQVSLQSGDRSSLVGGPMPRPGPQPGLNHDHQGPLAGST
PEPSRRYATLPHSLVARTSSVTSPSLQRRISTNLSASSYVKNKGRRFNIQLKKGPEGLGF
SITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVSGVDLDGKSQEEVVALLRA
TPMGGAVNLLVVRQEDSLLPREVHSEEEDMVLTPDGTQEFMTFEIPLSDSGSAGLGVSVK
GNRSKENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLHGMTNQDAMETLRTSM
SVEGNKRGMIQLIVARHVSKNNEQKSPASPSLLEHPLNSLLDNHERRISHSVYETNEGLD
SNSTPLANMLGRVGNYQLSPTVNMPQDDVVMIEDDRPPLLPAHLSDQSSSSSHDDMGFVG
EDPVPWIHDLPDQNECSLSADADPDGSFQREGFGRQSMSEKRTKQYENAAELEIIKTRKS
KSMDLGKYYESKLNQKVGVAEQVLGPSLGLKKSSSLESLQTAIAEVALNGEINPKRTRSR
IARGRGCNESFRAAIDKSYEKPGVTAAEEENSTETLDEDTEGSSRSGRESMSTSGDLIAG
PGLNGNPSKDDSQRDRDRVAGKEKKKPERDKEREKDKSKAKKGVLKGLGEMFRFGKHRKD
ERPGDRMERKGSSKSKAEDMQASEEETMRMRLEQERIQAKMRELREKQAKEREYAEIQDV
VGGAFSSDEEPTYAGIGSLDSSVDSSSMEPDNHHYHLPQSPHSPHLPPGRQGNGPPLEAL
YAQVNKPRNGRPAAPDSSHMAPSNHDRIQMLRTEFQQARQEDDVEDHRHTYGHNQSWPYA
RPATPSGRHSVTVEAQPQEDRDGFQQAQRQYNSLPRQPRKNPSTASQESWDKMYTPPEAF
QTSKENPRYSGSHGSRNGYLATSSFNARVLLETQELLRQEQRRRDQEASKTRPPPAQDAR
ASGGSGGTYDHGRDHAQAPGPAPVKAPPHTKGPYRQDVPPSPSQLAKLSRHQGSEKGRLF
YS
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgcttcgggaggacccgggtggtcgtcccgtgtggggatgggaat
atacatgtccacagcctcatcgagcaggcggccatgaggtacaagaaggcgatcgcgaag
gaccccacctactgggtccaggtccacaggttggaacatggagatggaggcattttggac
ctggatgacatgctgtgcgatgtggtggatgacaaagataggctggtagcagtatatgag
gagcaggatcctcacaatggaggcgacggtaccagtgccagctccaccggtacgcagagt
cccgaacccttctccagtgacatgagttcagcgtcgacctttcagccctgccagcccaac
agtgagatcgaggtcaccccgtcctctctgcgatccaacatgcctctccacgtccgtcgc
agcagcgatccctccctggtcggcctgcttccaggtgaggtcggtccagaggaaccgtcc
aggaagaacccgactcgctggtccacaaccgctggctttcaaaagcacaaccccaaacca
aacaccagcacgggcagcctggaacaaaagaaaagccacgcctatcggagtcttcctcgc
gatacgagtggctggaccactcagttccagagagaaacgactcgatcgtccctcagcgcc
aaccatccgatggtggaccaatggctggacagacaggaacaggatgaagagcgaaggaga
cacgaaaggaggattgaaaggatagagccagtagggagggccgactcctcattggagcat
gggttcagtctagcaggcctgctcaagccggtcgaggtgtccaatggaggggggcccctg
gggatccacgtattgcccctcagctcgcaggatgccaggactcacggcttgctggtgaag
cgtctggagcgcggggggaaagccgagcaggagcgtctcttccaggagaacgactgtatt
gtcaaaattaatcagggagacattcgccacctgcgcttcgaacaagcccagaacattttc
aagcaggccatgcgtggcccggtcatcctcttccacgtggtccccgcagccatgaagagg
cagtacgagctgctgacggcccagaccgagctcagcccgccacagctcaaccgagtccgc
ttcagccaagtctccctgcagtcgggggatcggtccagtctggtgggggggccgatgccc
agacctggaccacaaccaggcctcaaccacgaccaccagggacccctggcaggaagcacc
cccgagccgagtcggcgctacgccaccttgccccactccttggtcgccaggacctcttca
gtcacctcaccctccctgcagcgcaggatcagcacaaacctgtccgccagctcctacgta
aagaacaaaggacgcagattcaacatccagctgaagaagggtccagagggtctcgggttc
agcatcacctccagagacgtacccattggtggcagtgctcccatttacgtcaaaaacatc
cttcctcgaggggccgccatccaagatggccgattgaaagctggagaccggctgctggag
gtcagtggagtggatctggatggcaagagccaggaggaggtggtggcgctgctccgagcc
acgcccatgggcggggctgtgaacctgttggtggtccgccaggaggactcgctgctgccc
cgagaagtgcattcagaggaagaggacatggtgttaaccccagacggtacacaagagttc
atgacctttgagatccctctgagtgactcaggctcggcgggcctcggggtcagcgtcaag
ggtaaccggtccaaggagaaccacgccgacttgggcatctttgtgaaatccattattaat
ggcggtgctgctagcaaggacggccgtctgcgggtcaacgaccagctcattgcagtcaat
ggggagtcgctgcatgggatgaccaaccaggacgccatggagacgctgcgcacatccatg
tccgtagagggcaacaagcgggggatgattcagctcatcgtggcccggcacgtgtccaaa
aacaatgagcaaaaatctcctgccagcccttcgcttctcgagcatcccctgaactcgcta
ctggacaaccacgagcgccgcatctcccactccgtgtatgagaccaacgaaggcttggac
agcaactccacgccgctggctaatatgctcggacgcgttggtaactaccagctctccccg
acggtgaacatgcctcaggacgacgtcgtgatgatcgaagacgacaggccgccgctgctt
cctgcccatctctccgaccaatcgtcttccagttcccacgatgacatgggcttcgtgggg
gaggacccggtgccctggatccacgatctgccagaccagaatgaatgctcgctcagcgca
gacgccgaccccgacggctcgttccagagggagggcttcggccgccagagcatgtcggaa
aaacgcaccaaacagtatgaaaatgcagctgagctggagatcatcaagacgcgcaagtcc
aagagcatggatctgggtaaatattatgagtcaaaactgaaccagaaagttggtgtcgca
gaacaagtcctcggaccctcgctgggcctgaaaaagtccagctcccttgaaagcctccaa
acggccattgccgaggtggcgctgaacggcgagatcaaccctaaaaggacgcgctcgcgg
atcgccaggggccgcggctgcaacgagagcttccgggccgcgatcgacaaatcatacgag
aaacctggcgtcacggcggcagaagaggagaacagcactgagacattggacgaggacacc
gaaggaagttccagatcgggccgcgagtcgatgtccaccagcggcgacctcatcgcggga
cccgggctgaacggcaacccctccaaagacgacagccagagggatcgggacagggttgct
gggaaggagaagaagaaacccgaaagggacaaagagagggagaaggacaagagcaaagcc
aagaaaggcgtgctgaagggcctgggcgagatgttcaggttcggaaagcaccggaaggat
gagcggccaggagacaggatggagaggaagggctccagtaaatccaaagctgaggacatg
caggcgtcggaggaggagaccatgcggatgaggctggaacaagagagaatacaggccaag
atgcgggagcttcgggagaagcaggcaaaggagagggaatatgctgagatccaagatgtc
gtcggcggggccttcagctcagatgaggagcccacgtacgccggcatcggatcgttggac
tcgtcggtggacagcagcagcatggagcccgacaaccaccactatcatctgccccagagt
ccacacagccctcaccttcctccgggccgacagggcaacggtccgcccctggaggccctg
tatgcccaggtcaacaagccacgcaacggacgccctgcagctccagacagcagtcacatg
gctcccagtaaccacgaccggatacaaatgctgagaaccgagttccagcaggccaggcag
gaggacgacgtggaggaccacagacacacctacggccacaaccagtcctggccatatgcg
aggccagcgacgccaagcggccgccattcggtgacagtggaggctcagccgcaggaggac
agagatggtttccaacaagcacagagacagtacaactccttgccacggcaacctcgaaag
aaccccagcacggcgtcccaggagtcctgggacaagatgtacacgccgccagaggctttc
cagacgtccaaggagaacccccgctactccggcagccatggatcccgtaacggctacctg
gcgacgtccagcttcaacgcccgcgtcctgttggagacgcaggagctgctgaggcaggag
cagaggcgcagagaccaggaggccagcaagaccaggccgcctcccgcgcaggacgcccgc
gccagtggcggcagcggcggcacctacgaccacggcagagaccacgctcaggccccaggc
cccgccccggtgaaggccccgcctcataccaagggcccctacagacaggacgtacccccg
tcgccctctcagctcgccaagctcagcaggcaccagggctcagagaaagggaggcttttc
tactcctga
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