Clinocottus analis (woolly sculpin): 137789202
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Entry
137789202 CDS
T10471
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
137789202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137789202
Membrane trafficking [BR:
cana04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
137789202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
137789202
NCBI-ProteinID:
XP_068438604
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MTVMAVCVWVAAPLLFLGLCLCSVGSQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHVVHV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYMGGVTPELHSSPLRLTSPSVREHPA
FRGSISAVSVNGSLSTLENSEGVKVTAGCGPDHQCQNGGLCSVVNDQAVCDCADTGYQGK
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVKVTRNLR
QHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQRDPKIEVSGVVSFKCESVATLDPVTFDTPESFVALSKWS
AKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAMDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDETLYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSKE
PPKQCLSNPCQHNGVCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGP
ETIFAGSGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSF
VTLPTLQAYYSMHLFMQFKTTSPDGLVLFNRGDGNDFIVVELVKGYLHYISDLGNGAHLI
KGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEM
YRELPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEGPSTTCQEDSCSNQ
GVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTRADRLALG
FSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVNDGKYHII
RFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLDKGRQLTI
FNSQTTVRVGGAERSIGMFQGQLSGLYYNGLRILNMAAEGHPHIKVDGSARLVGDMPSSS
ITPQSSAAAGGNRSDSAPSISDITTTTATNRKQGGATQQSADDLLVASAECPSDDEDIDP
CDPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEG
SYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatggcggtgtgtgtttgggtggcagcccccctgctcttcctggggctgtgc
ctgtgcagtgtggggagccaggcccaaggggaggtcctggagtttggtggcgtgtccagc
cagtgggggcggttccccgtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaagagggcctactgctctacctggatgacgagggcttctgtgacttc
ctggagctgctgcttctccacggccacctccgcctgcgcttctccatcttctgcgctgag
ccggcagagctgcaatcaggcgtggcggtcagcgacgggcactggcacgtggttcatgtc
aagcgggactggaggaacacctcgttggaggtcgacgggcgactggagggatgggcggaa
gtgaagagcaagagaagagacatgacagtgttcagccacacctacatgggcggggtgacg
ccagagctccactcctcgcccctgcgcctcacgtccccttcggtcagggaacacccagcc
ttccgtggctcgatctcggcggtgagcgtcaacggctcgctgtcgacgctggagaactca
gagggcgtcaaagtaacagctggctgcgggccggatcaccagtgccagaacggagggttg
tgcagcgtggtcaacgaccaggccgtctgcgactgcgccgacaccggctaccagggcaag
gactgcagcgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
gctcgcgaggagtatgtcgccaccttcaagggctctgagtacttctgctacgacttgtcg
cccaaccccatccagtctagcagcgatgaaatcacgctctccttcaagacgctgcaacgc
aacggcctgatgcttcataccggcaagtcagccgactacgtcaacctagcactgaagaac
ggagccgtgtcacttgtcatcaacctcggctccggggccttcgaggccttggtggagccc
gtcaacggcaagttcaacgacaactcctggcacgacgtcaaggtcacccgcaacctgaga
cagcactcaggcattggacacgctatggtgaccatctctgtggacggcatcctgaccacc
acgggctacacgcaggaggactacaccatgctgggctctgacgacttcttctacgtggga
gggagccccagcaccgccgacctgcccggttctccagtcagcaataacttcatgggctgt
ctcaaagaggtggtgtacaagaacaatgatgtaaggttggagctgtctcgactggctaaa
cagagagacccaaagattgaggtaagtggggtggtgtcctttaagtgcgagagtgtggcc
acgctggaccccgtgacctttgacacccccgagtccttcgtggcactgagcaagtggtca
gcgaagaaagccggatcgatctcgtttgacttccggaccacagagccaaatgggttgatg
cttttcagccatggcaaaccgcggcagcagcaacgcaaggatccacgcacgcctcctaca
ctcaaggtggatttcttcgccattgagatgctagatgggcacctgtacctgctgctggac
atgggctcgggaaccaccaagaccaaggctatggacagaaaggtcaacgacggagaatgg
tatcatgtggacttccagagggacggacgctcaggaaccatctccgtgaacagtgtgaga
acagcgtacacggctccgggtgacagcgagatcctggacctggatgagactttgtacctc
ggaggactaccggaagaccgcgctggactcattttccctacagaggtgtggacggctctg
ttgaattacggttacgttggctgcatcagagacctgtttgtggacgggcagagcaaagac
atccggcgactggccgaggcccagagagcggtgggggtgaagccctcgtgctcgaaagag
ccgcccaagcagtgcctgtccaatccttgccagcacaacggcgtctgcagggagggctgg
aaccgctacgtctgcgactgctctgggacgggatacctgggacggtcctgtgagagagat
gcgactatcctgtcctacgacggcagcaagtttatgaaggtgcagttgcctgtggcgatg
cacaccgaggcggaggacgtctcgctgcgctttcgctcacagcgggcctatggcgtactc
atggcaaccacgtcccgaaactccgcagacaccctccgtctggagctggacggcggccgc
gtccgactcactgtcaacctagactgtatcaggataaactgtacagccagtaaaggccca
gagaccatctttgcggggtcgggcctcaatgataatgagtggcacacggtgagggtagtc
cggcgtggcaagggcctcaaactcacggtggacgacctgcagcctgttgaaggtcagatg
gcgggcgaccacacccagctggagttccacaatgtggagacgggtattgtgacggagaag
cgcttcatgccggccgtgccctcgaatttcatcggccaccttcagggcctgacgctgaac
ggcatgccctacatcgacctctgcaagaacggcgacatcgactactgcgagctcaacgcc
gtcatcggctataagagcatcgtggccgaccccgtcacgttccgctcgcgctccagtttc
gtcacgctgcccacgctgcaggcctactactccatgcatctcttcatgcagttcaagacg
acgtcacccgacggtctcgttctcttcaacaggggagacggcaacgacttcatagtggta
gagctggttaaaggctacctacactacatctcggacctgggcaatggcgcacacctgatc
aaaggcaactctaacagtcccctaaatgacaaccactggcacaacgtgcacatatccaga
gatactaacaatctccatacagtcaagattgacaccaaagtcaccacgcagaccaccatg
ggcgccaagaacctcgacctaaagggtgacctgtacatcgggggtgtctccaaagaaatg
taccgagaactgccgaagctggtccactcccgcgagggattccagggatgcctagcgaca
gttgatctaaatggccgtctccctgaccttttggctgatgcactggcaaccatgggacaa
gtggagagaggctgtgaaggtcccagcactacatgtcaagaagactcttgctcaaatcag
ggagtttgtttgcagcaatgggagggcttcacctgtgactgcagcatgacatcgtatgct
gggccactctgcaacgatgctgggaccacttatatctttggccgtgatggaggcgtggtg
gtttacacgtggcctcctaatgaacgtcccagcaccagagcagaccggcttgcccttggg
ttcagcacccaacagaaacacgccattcttctccgggtggacagcgcatctggcctggga
gactaccttcagctgcagatagataaaggcaacattagagtagtgtttaacgttggcacc
gatgacatcaacatcgaggagagctccaagtttgtcaacgacggaaagtaccacataatt
cggttcacccgcagcggaggcaatgcgaccctccaactggacgacctgccagtcatagag
cgctatccctcaggcaacattgataacgagcgcctggccatcgccagacagcgaatcccc
tatcggctcggtcgagtagttgacgattggctactcgacaaaggtcgccagctgaccatc
ttcaacagccagacgacggtgcgcgtcgggggagccgagcggagcatcggcatgttccag
ggccagctgtcgggactctactacaacggcctccgcatcctcaacatggccgccgagggg
catccgcacatcaaagtagacggcagcgcgcgactggtcggcgacatgccgtcctcctcc
atcaccccgcagtccagcgctgcggctggaggcaaccgctctgactccgccccctccatc
agtgacatcacaaccaccacggccaccaacaggaaacagggaggcgccacacagcagtcg
gcagacgacctgctggtggcgtccgctgagtgtcccagcgacgatgaagacattgacccc
tgcgaccccagttcagcccgccctcccctgccggaggtgaaggtgttcccaggtccgtcc
gaggtggttcgggaaagcagcagcactacaggtatggtggtgggcatcgtggctgcggcg
gccctctgcatcctcatcctcctctacgccatgtacaagtaccgcaaccgcgacgagggc
tcctaccacgtggacgagagccgcaactacatcagcaactcagccacacagccaaacggc
agcgccaaggacaagccgctggggatcgccaagatctccaagaacaagaagaacaaagac
aaggagtactacgtctga
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integrated database retrieval system