Clinocottus analis (woolly sculpin): 137789211
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Entry
137789211 CDS
T10471
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cana01002
]
137789211 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137789211 (usp42)
Enzymes [BR:
cana01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
137789211 (usp42)
Peptidases and inhibitors [BR:
cana01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
137789211 (usp42)
Ubiquitin system [BR:
cana04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
137789211 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
137789211
NCBI-ProteinID:
XP_068438631
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MTIVDRSSEKSDHESVGCKRSPFTSGDVGMDGSCSSSWAMGPTMPNDSPRLKAAGGCLGP
TPGAAVYNSTPSSVDRSKEQVMSSGDGIDSPQKVLFPPERLNLKWTQVHRIGAGLQNMGN
TCFLNSALQCLTYTPPFANYLLTREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIG
VLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLTGTKLDRQTQATTYIHQVFGGYLR
SRVKCLNCKAVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT
ASKRFTIHRSSNVLTLSLKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGEPQVYGLFAV
LVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSGDGKKSG
DYSHMSHNPSIPGQSSPRPVVIPRINTTVHHNNNMGFIGPQLPPHMTKRNIHVNGNGSLR
DYPSNSNLSNSKPSTSSSVVGKPGHGLASSSSSISHTISRPTMIPDHDKRQKLSFFIGQG
KPNRPSSSASSYSQSASASSSSSSSCSSSSSLSSSQSTSDVRFVPRQLNHSNGMSRSNGD
HHTGGNGASFLVPYGQESSEESDQENCVTLEKGFLAKSHLNGNKRTGDVFDHSTQATNRQ
SVVHHNGNGLNGATNGVSESSRNGHHYEHHKVNGHNTPDKVSGSNHGGPSFVTTVAANGL
DGDHGQTSKEAHTSASSQASSSQSIHPVASESQNLSTPDTRAKNVSEPFPQQTASSTVSS
PPAAAATKTHSISSKESASSSALHCNPTALSIPPDCSQNTNGASPVKISRGGEEARDTTR
TSDLSAETEGRTDSKEQHQSKPSSRANEVPTYRDRERDRLYSDCSRDKERHYRDRSQERE
SAGDRHRYRRDSRDPHHYQRPHKDRFPPHNRSFRDWESEHRWERTLPHPRERDRDRCSNH
YHHNHNRRYRDDWDRERRGHGYPYSEKSHGRGRWQPDSRDSRVIKDKSNGRERDYYPSKE
ENSSPSTEPETSTKSKGSSPQARISTFGSALNKEDQNHKRTTDPLSKERDDSSEAHHSKK
HKKSKKKKKSKDKDRHRESGSEVDSDRANETKKKKKKRRQRDSEHHSPGAARSHKSRSSE
EKESRKRRYDDIKAAKNDNAFLPEKRRCSDYNGGSREHPPSSNHTSPTNGSTHHYLNGYK
GNGYSQINGDSHGFSSGLKP
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagatcttcagaaaagtctgaccacgagtcagtcgggtgtaagcga
tctcccttcaccagtggagacgtggggatggacggtagctgttccagcagctgggctatg
ggtcctaccatgcccaacgactctccacggctgaaggctgcaggaggctgcctgggccca
acgcctggagctgcagtctacaacagcacaccctcctctgtggaccggtccaaggagcaa
gtgatgagcagtggtgatggcattgactcgccgcagaaggtcctctttcctccagagcgg
ctcaacctaaagtggactcaggttcaccgcattggcgctggcctgcagaacatggggaac
acctgctttctcaactcagccctgcagtgtctcacctacacccctccgtttgccaactat
ttgctgacacgggagcactccaaaacatgtcatgagccagggttctgtatgatgtgcaca
atgcaaaaccacatcattcaggtctttgccaactctggaaatgtcattaagcccattggt
gtgctaaatgagcttaaacggattgcgaagcactttcgctatggcagccaggaggatgcc
catgagttcctgcggtacacagtggatgctatgcaaaagtcctgcttaactggaaccaaa
ttggacaggcaaacgcaggcaaccacttacatccatcaagtatttggcggctacctaagg
tccagagttaaatgtttgaactgcaaagcagtctctgatacatttgacccttttcttgat
ataactctggaaattaagacagctcccagtgtctccaaggctctggagcagtttgtcaag
ccagagcagctggatggagaaaatgcctacaaatgcaccaagtgtaaaaaaatggtcaca
gcctcaaagagatttaccatccaccgcagttcaaatgtgcttaccctctcactcaaacgc
tttgcaaacttcagtggaggcaaaatcacaaaggatgtgaaatatccagagtacctggac
ctgcggcccttcatgtctcagtcacaaggggagccccaggtctacgggctgtttgctgtg
ctggtccactctggattcagctgtcatgctggacactatttttgctatattaaggcgagc
aatgggcagtggtatcagatgaacgactcctctgtgtctgtcagtgacatcaggtctgtt
ctcaaccagcaggcctacgtccttttctacatcaagtccggtgatgggaagaaatcaggg
gactacagccacatgagccataacccgagcatccctggtcagtcctctccacgaccggtg
gtgataccacgcattaacaccaccgtccaccacaacaacaacatgggcttcataggtcca
cagcttccgccacacatgaccaagcgtaatatccacgttaatgggaatggatctctaagg
gactatcccagcaactccaatctaagcaactccaagcccagcaccagcagcagtgttgtg
ggaaaacctggccatggactggcctcttcctcttcttccatctcccacacaatcagccgg
cccacgatgatcccagaccacgacaaacgccagaagctttccttcttcatcggacaaggc
aaaccgaaccgcccgtcctcctccgcctcctcttacagccagtcagcctctgccagcagc
agcagcagcagcagctgctcctcctccagctctttatcctcctcacagtctacctcagac
gttcgctttgttccacgtcagcttaaccacagtaacggcatgtcgcgcagtaacggggat
caccacacgggagggaatggagcgtcgttcttggtgccgtacggccaagagtcttcggag
gaatcggaccaggagaactgtgtcactttggagaagggctttttggctaagtctcacctt
aatggaaacaagagaacgggagacgtgtttgatcattctactcaagccaccaacagacag
tcagtagtgcaccacaatggtaacggattaaatggagcaaccaacggtgtctctgaatcc
agtcgaaatgggcaccattatgaacaccacaaagtgaacggacacaacacccctgataaa
gtctctggcagtaatcatggaggtccatcctttgtgactactgttgctgctaatggacta
gacggtgaccatggtcaaacaagcaaagaggcacatacttctgcctcatcccaggccagt
tcttctcagagcatccatccggttgccagtgaaagccagaacctctccactcctgacaca
agggctaagaatgtgtctgaaccattccctcagcagacggcatcctccactgtcagctct
ccacccgcagctgctgctacaaagactcattctatctcatctaaagaatctgcttcctct
tctgctctacattgcaaccctacggccttatccatcccgccagactgctcccaaaacact
aatggggcctctccagtgaaaattagcagaggtggggaggaagcaagagatacgacacgg
accagtgatctgtcagcagaaactgaaggacgcacagattctaaggagcaacaccagtct
aagcccagttctagagccaatgaagtaccaacataccgagacagggagagagaccgactg
tactctgactgcagcagagacaaagagagacactacagggacaggagtcaggagcgagaa
agtgctggggatcggcatcgttacagacgggactccagagatccccaccactatcagcgc
ccacacaaggatcgttttcctcctcacaatcgttccttcagggactgggagtccgagcat
cgctgggagcggaccctcccccacccaagggagcgcgatcgtgataggtgctctaaccat
taccaccacaatcacaaccgccgctacagagatgactgggaccgtgagcggaggggacac
ggttatccctacagcgagaagtctcatggtcgagggaggtggcagccagacagtcgagac
tcccgggtgattaaggacaagagcaatggcagagagagggactattatccgtcaaaagaa
gagaattcctcgccttccacagagccggaaacatccacgaagtccaaaggctcgtctcct
caggctcgtatctccacgtttggttcagctctaaacaaggaggatcagaaccacaaaagg
acgactgatcctctgagcaaggagagggatgacagctctgaagcccaccactctaaaaaa
cacaaaaagagcaagaaaaagaagaagtcaaaggataaagacaggcaccgtgagagcggc
tctgaagtggactcagacagagccaatgaaacaaaaaagaagaagaaaaagaggaggcag
agggacagcgagcatcacagcccaggagcagcgaggagccacaagagcagaagcagcgag
gagaaggaaagccgcaagcgacgctatgacgacatcaaggcggctaaaaatgacaatgct
tttttgccagagaagcgtcggtgctcagactacaacggtggcagccgagaacatccgccc
tcctccaaccacacctcacccacgaacggttcaactcaccactatctcaacggatacaaa
ggaaatggttacagccaaatcaatggtgactcccatggattctccagtggcttgaagccc
tga
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integrated database retrieval system
