Clinocottus analis (woolly sculpin): 137789279 Help Entry 137789279         CDS       T10471                                  Name (RefSeq) ATP-dependent RNA helicase DHX8   KO K12818   ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] Organism cana  Clinocottus analis (woolly sculpin) Pathway cana03040   Spliceosome Brite Enzymes [BR:cana01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      137789279 Spliceosome [BR:cana03041]  Complex C   Other components    Step II factors     137789279 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 GIPC1_GH2 nSTAND3 T2SSE AAA_16 Flavi_DEAD PhoH TsaE ABC_tran Sigma54_activ_2 Motif Other DBs NCBI-GeneID:  137789279 NCBI-ProteinID:  XP_068438797 LinkDB All DBs Position Unknown AA seq 1243 aa AA seqDB search MADVGVDELSQLEYLSLVSKVCTELDNHLGISDKDLAEFVIDLAEKEPTFDGFKDLLLKN GAEFTDSLVGNLLRLIQTMRPPPKSSTNKVSEVEVKPKTVKDKMKELFPALCRADDPAPK KLLDEDDVKVAADAMMELEMFLPSVSGAAPKSSKSSRSEKSRRQSRSRSKSRERDRRRDR YGDRSRDGDRHRDRSRDRDRNGDRDRDRSRDGDRRKRHRSRSRSRSRDRHRDGDRDRDGD RDRGKRRDKSSRWSERSPSPKKDQDKDSDRWKDKHVDRPPPEEPSVGDIYNGKITSIMQF GCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQKVKIKVLSFTGSKTSLSMKDV DQETGEDLNPNRRRNVGPDGGDEISMRNPDRPSNLKLGHPPELEQDDTLERKRLTKISDP EKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSM DMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDSIPMGLNKHWVDPLPDVD GRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLIQA VHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCC LGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYAIIMLDEAHERTIHTDVL FGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYL DASLITVMQIHLTEPPGDVLVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT PISQAQAKQRAGRAGRTGPGKTYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGI NDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV HLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKF SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAK KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFS PAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR NT seq 3732 nt NT seq  +upstreamnt  +downstreamnt atggctgacgttggagtcgacgagctttcgcagcttgaatatttgtctttggtgtcgaag gtctgcacggagcttgacaaccatctgggaataagtgacaaagatttagctgagttcgtc atcgacctcgctgagaaagaaccgacctttgatggattcaaagatcttttgctcaaaaat ggagccgaattcacagattctctcgtcggtaatttgctcaggctcatccagactatgcga cctccacccaagtcctctacgaataaagtctctgaggttgaggtcaagccgaagacggtg aaggacaagatgaaggagttgtttcctgcgctgtgtagagcggatgatccggcaccaaag aagctactagatgaagatgatgtgaaggtagcagctgatgccatgatggagctggagatg tttctgcccagtgtcagtggggcggcccctaaaagcagcaagagcagccggtcagaaaag agcagacgccaaagccgaagtcgcagcaaaagcagagaaagagacaggcgcagagatcga tacggagatcgaagcagagatggggacagacatcgagaccgaagcagagatcgagaccga aacggcgacagggatcgagaccgaagcagagacggggacaggagaaaacggcaccgctcc aggtccaggtctcgctccagagatcggcacagagacggcgacagagacagggacggcgac cgagaccgcggcaaaagaagggacaaatcttcccgctggtccgagcgctcgcccagtccc aagaaagaccaagacaaagactctgatcgctggaaggacaaacatgtggaccgcccgccg ccagaagaaccttctgttggagacatatacaacggcaaaatcaccagtatcatgcagttt ggatgctttgtccagctggagggattaaggaaacgatgggagggtttggtccacatttcc gagctgcgcagagaaggccgcgtggccaacgtcgccgacgtcgtcagcaaaggccagaag gtcaagatcaaggtgctctcgttcaccggctccaagaccagcctcagtatgaaggatgtg gaccaggagacgggagaggatctgaaccccaacaggcggaggaacgtaggcccggacgga ggggacgagatctccatgaggaaccccgaccggccgagcaacctgaagctgggccacccg cccgagctggagcaggacgacaccctggagcgcaagaggctcaccaagatttctgacccg gaaaagtgggagatcaaacagatgattgccgccaacgtcttgtccaaagaagaattcccc gattttgacgacgagaccgggatccttcctaaagttgacgacgaagaggatgaggatttg gaaatcgagctggttgaagaggaacccccgttcctgaggggacacaccaagcaaagcatg gacatgagccccgtcaagatcgtcaagaatccagatggctctctgtctcaagccgccatg atgcagagcgctctggccaaagagagacgagagctgaagcaggcggcgcgcgaggcggag atggactccatccccatggggctgaataaacactgggtcgacccgctgccagacgtggac ggtcggcagattgcggcgaacatgaggggcatcggcatgatgcccaacgacatccccgag tggaagaagcacgcgttcggaggcaacaaggcctcctacggaaagaagacgcagatgtcc atcctggagcagagggagagtctgcccatctacaagctgaaggagcagctcattcaggcc gtccacgacaaccagatcctgatcgtgatcggagagacgggctccggcaagaccacgcag atcacccagtacctggcggaggccggctacaccacccgggggaagatcggctgcacgcag cctcgccgcgtggccgccatgtccgtggccaagagagtctccgaggagtacggctgctgt ctgggacaagaggtgggttacaccatccgattcgaggactgcaccagccccgagacggtg atcaagtacatgacggacggcatgctgctgagggagtgtctgatcgactcggagctgggc cagtacgccatcatcatgctggacgaagctcacgagaggacgatccacaccgacgtgctc ttcggtctgctcaagaagactgttcagaagcgcacggacatgaagctgatcgtaacctcg gccacgctggacgccgtgaagttctcccagtatttctacgaggcgcccatcttcaccatc ccggggaggacgtacccggtggaggttctctacaccaaagagcccgagacggactacctg gacgccagcctcatcacggtcatgcagatccacctgaccgagcctccgggtgacgtcctg gtgtttctcacggggcaggaggagatcgacaccgcctgtgagatcctgtacgagaggatg aagtcgctggggccggacgtccccgagctgatcatcctgccggtttactccgccctgccc agcgagatgcagaccaggatctttgacccggcgccgccgggcagcagaaaggtggtcatc gccacaaacatcgcagagacgtctctgaccatcgacggcatctactacgtggtggatccc gggttcgtcaagcagaaagtctacaactcgaagacgggcatcgaccagctggtggtgact cccatctcacaggcccaggccaagcagcgggccggtcgagccgggcggacgggccccggg aagacgtaccggctgtacacggagcgcgcctacagggacgagatgctgaccaccaacgtg cccgagatccagaggaccaacctggcgagcacggtgctgtcgctgaaggcgatgggcatc aacgacctgctgtcctttgacttcatggacgctccccccatggagacgctgatcaccgcc atggagcagctctacacgctcggcgctctggacgacgaaggcctgctgacgcgtctgggg aggaggatggccgagttccctctggagccgatgttgtgcaagatgctgatcatgtccgtc cacctgggctgcagcgaggagatgctcaccatcgtgtccatgctgtcggtgcagaacgtc ttctacaggcccaaggacaagcaggccttggcggaccagaagaaggcgaagttccaccag ccggagggcgaccacctgaccctgctggcggtctacaactcctggaagaacaacaagttc tccaacccctggtgctacgagaacttcatccaggcccgctcgctgcgccgagcccaggac atccgcaagcagatgctgggcatcatggacagacacaagctggacgtggtgtcttgcggt aaagccaccgtgcgcgtccagaaagccatctgcagcggcttcttcaggaacgcggccaag aaggacccgcaggagggctaccgcaccctgatcgaccagcaggtggtgtacatccacccc tccagcgctctgttcaaccggcagcccgagtgggtggtgtaccacgagctggtgctcacc accaaggagtacatgcgcgaggtgaccaccatcgacccgcgctggctggtggagttctcg ccggccttcttcaaggtgtccgaccccacgcggctcagcaagcagaagaagcagcagcgc ctcgagccgctgtacaaccgctacgaggagcccaacgcctggaggatctctcgggccttc cggcgccgctga

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