Clinocottus analis (woolly sculpin): 137789368
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Entry
137789368 CDS
T10471
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04145
Phagosome
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137789368
04518 Integrin signaling
137789368
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
137789368
09144 Cellular community - eukaryotes
04510 Focal adhesion
137789368
09142 Cell motility
04820 Cytoskeleton in muscle cells
137789368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137789368
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cana04147
]
137789368
00536 Glycosaminoglycan binding proteins [BR:
cana00536
]
137789368
Membrane trafficking [BR:
cana04131
]
Endocytosis
Phagocytosis
Opsonins
137789368
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137789368
Exosomal proteins of colorectal cancer cells
137789368
Exosomal proteins of bladder cancer cells
137789368
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137789368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
EGF_3
TSP1_CFP_C
EGF
TSP1_ADAMTS
FnI_RECK
TSP1_CCN
DUF8848
Motif
Other DBs
NCBI-GeneID:
137789368
NCBI-ProteinID:
XP_068438976
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MSPLRGFPRLLKFLFAAAVCAGVGGAKVDNVSSEVCRHPCEELVGLLTEIQGLRIVTSNL
LEDLERVSKENEEMRISMAELSNNSSSSKNNSRNRNNSSSNGSSGNSNGSSGSSNGSTRN
SSSRGSGLGGNGLGGSGLGGTSGTGPGGTGHGGSGHGGSGLGGTGPSGSGLGGSGLGGSG
DVNDLDRDGEVWCMQDGRVYDHGEDWDVDSCTACACQNGKVVCQQVSCPPVSCIYTSFID
GECCPVCLDNENGWSPWSEWTHCSVSCGRGGQQRGRTCNDIKPSCAGPSVQTRSCMPLKC
DRKAPPDGNWGLWSPWSACTTTCGDGSITRVRLCSNPPPPKGGRGCTGSARETQPCNNTL
CPVAGGWTRWTEWSLCSESCGGGLTSRQRECLNPAPQHGGKPCAGDAVDYEACNKQPCPI
DTCLLSNPCFPGVECTSHSDGSWECGHCPLGLDGNGTHCEDENECEVESVCVTECVNTDP
GFYCLPCPPRYKGSQPYGLGLQEAQKTKQVCEPYNPCKDNTHTCHKYAECVYLGLASEVL
FKCVCAVGFAGDGFLCGEDSDLDGWPNVRLTCKHNATYHCHKDNCPTLPNSGQEDLDKDG
KGDACDPDDDNDDVIDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFDSNPQQTDTDDNGE
GDACSIDIDGDEVLNDRDNCPFVYNTDQRDTDLDAVGDQCDNCPLLHNPLQLDSDSDLVG
DMCDDNEDIDEDGHQNSLDNCPYISNSNQADHDKDGKGDVCDHDDDNDGVPDDRDNCRLV
PNRDQLDSDGDGSGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPKGTTQS
EPLWVIRSQGTELLQTANSDPGIALGYDRFNAVDFSVTFYVNTNRDDDYAGIVFAYQSSR
RFYVVMWKQVSQAYWEKKPSKAFGTAGLSIKLVNSTSGPGEYLRNALWHTGNTRHQVRTL
WHDPNNIGWKDYTAYRMHLTHRPKTGFIRVVVYEGRGILSDSGALYDHTLAGGRLGLFVF
SQEHVLFSDLRYECRDN
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagtccactgagaggtttcccccggcttttgaaattcctctttgcagcagctgtgtgc
gcaggtgtagggggtgcgaaggtggacaatgtgtcgtcagaagtctgtcgccatccatgc
gaggagctggtgggcttgctcactgagatccaaggcctgcgtattgtgaccagcaacctg
cttgaagacctagagagagtatcaaaagaaaatgaagagatgcggatatcgatggctgag
ctgagcaataacagcagcagcagcaagaacaacagcagaaacagaaacaacagcagcagc
aacggcagcagtggcaacagcaacggcagcagtggcagcagcaacggcagcaccaggaac
agcagcagcaggggcagcggccttggtggcaacggccttggtggcagcggccttggtggt
actagtggtaccggccctggtggtaccggccatggtggcagcggccatggtggcagcggc
cttggtggtaccggccctagtggcagcggccttggtggcagcggccttggtggcagcggc
gatgtcaatgatctcgacagagacggggaggtctggtgtatgcaggatggacgggtgtac
gatcacggggaggactgggatgttgacagctgcactgcgtgcgcttgccagaatggaaag
gtggtgtgtcagcaggtgtcttgccctccagtatcctgcatctacacatcctttatcgat
ggagagtgctgtcctgtctgtctcgataatgaaaacggctggtccccgtggtcggagtgg
acccactgttcggtcagctgtggacgcggagggcagcaaagaggccggacctgcaatgac
atcaagccgtcctgtgccggcccgtcggtccaaacccgcagctgcatgccgctgaagtgt
gaccgcaaggcgcctcctgatgggaactggggcctctggtccccttggtctgcgtgtaca
accacatgtggagatggcagcatcacacgggtccgtctctgcagcaaccctccaccgccg
aaggggggcagagggtgcacgggcagcgccagggagacgcagccgtgcaacaatacactc
tgccccgttgctggaggctggacacgctggaccgagtggtcactgtgctcagagtcgtgc
ggcggaggtcttacgagtcgccagcgggagtgtttgaaccccgcccctcagcacggcggg
aagccttgtgctggagacgctgtggactatgaagcatgcaacaaacaaccatgtccaata
gacacatgtttgctctcaaatccgtgttttcctggagttgagtgcacatcacacagcgat
ggatcatgggagtgtggacattgtccgttgggtttggatggaaacggcactcactgtgaa
gatgagaacgagtgtgaagtggagagtgtgtgtgtcacagagtgtgtaaacacagaccct
ggcttctactgcctgccctgtcctcctcgctataaaggcagccagccgtacggactcggg
ctgcaggaggcccagaaaaccaaacaggtgtgcgagccatacaatccttgcaaagacaac
acacacacctgccacaagtatgctgagtgtgtgtacctgggcctggcgtctgaggttttg
ttcaagtgtgtgtgcgctgttgggttcgctggcgacggcttcctgtgcggtgaagactct
gatctggacggctggcccaacgtcagattgacctgcaaacataatgcaacctaccactgt
cacaaggataactgccccacgctaccaaactccggacaggaagacctggacaaggacggc
aagggcgacgcctgcgaccccgacgacgacaacgacgacgtcatagatgagcgggacaac
tgcccgctggtgtacaacccccggcagtttgactccgaccgagacggggtcggggaccgc
tgtgataactgtccgtttgatagcaacccgcagcagacggacactgatgacaatggagag
ggagacgcctgcagcattgacattgatggagatgaggttctgaatgaccgggacaactgt
cccttcgtctacaacactgaccagagggacacagacctggatgctgttggagaccagtgt
gacaactgtcctcttctgcacaaccctctgcagctcgactccgacagcgacttggtgggg
gacatgtgcgacgacaacgaggacatcgacgaggacggccaccaaaactctctcgacaac
tgcccctacatttccaacagcaaccaggccgaccacgacaaggacgggaagggagacgtc
tgtgaccatgatgacgacaacgacggtgtccccgatgaccgcgacaactgcagactggtg
cccaacagagaccagctggactctgatggtgatgggagtggcgatgcatgctttgatgac
tttgacaatgacagtattccagatgcgctggatccatgtccactgaaccaggatatcggg
tctacagacttcaggaagtttcaggttgttttgttggaccctaaaggcaccacgcagtcc
gagccgctctgggtgatccgcagccaaggcaccgagctgctgcagacggccaactcggac
cccggcatcgctttaggatatgaccggtttaacgctgtggacttcagcgtgacattttat
gtgaataccaaccgagatgacgactacgcgggcatcgtgttcgcctaccagtccagtcga
cgcttctatgtcgtcatgtggaaacaggtgtctcaggcctactgggagaaaaagccgtcc
aaagcttttggcacagcgggactttcgattaaactggtcaactccaccagcgggccggga
gagtacctccgcaatgccctgtggcacacgggaaacacccggcaccaggtcagaacattg
tggcatgatcccaataatattggctggaaggactacacagcctaccgcatgcacctcacc
cacaggcccaagactgggttcatcagggtggtggtgtacgagggcagagggattttatcc
gactcgggcgcgctgtacgaccacacgctggctggaggccggctgggactgtttgtcttc
tctcaggaacacgtcctcttctcagacctcagatatgagtgcagagataactga
DBGET
integrated database retrieval system
