KEGG   Clinocottus analis (woolly sculpin): 137789517
Entry
137789517         CDS       T10471                                 
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
  KO
K10858  DNA mismatch repair protein PMS2
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03430  Mismatch repair
cana03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    137789517 (pms2)
   03460 Fanconi anemia pathway
    137789517 (pms2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cana03400]
    137789517 (pms2)
DNA repair and recombination proteins [BR:cana03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     137789517 (pms2)
SSDB
Motif
Pfam: MutL_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 137789517
NCBI-ProteinID: XP_068439286
LinkDB
Position
Unknown
AA seq 847 aa
MSDVCSSEAAGAIKAIDKQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVRLKECG
AELVEVSDNGKGVEEANFEGLTLKHHTSKLKDFSDLIHVETFGFRGEALSSLCALSVLSV
VTCHESSQVGTKLVFDHKGHLVQQSPHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYV
KMIHVLQSYCVISTGVRITCSNQNGQGKRSTVLSTSGSQSMRDNIGAIFGPKQLQSLLPF
QQESPAENVIEEYGLKDADLPQQLFCMTGFVSRGDHGVGRSATDRQFFFINNRPCDPLKV
TKLVNEVYHMYNRHQYPFVALNIAVAYECVDVNVTPDKRQIFLQEEKLLLAILKTSLINM
YEAGVNKISLNYTPMPRTNTKSASDICAVVPCNENTPDPGEDMEPVYRSSKASVNLAGLK
AAFSSHHGSNSGNKSNVAKAASSGPTQKTLQSFFQDTVKPSSSSPLKPVSGQTKRSRVGD
SALDGFRYGRRLCSGTDSEKDSALSDCDLAVATPDIQCSDPAVFSPEEIDGVEKETLEET
SENGATVPENQEEQTEPRTSNEDPAVSPNVKRARTEELCFPAEHMSSTVDAPVCLQKRTV
PLQFSLQDLAGKVKRLQDLKKQRAGEDLRYRRFRAKINPGENQSAEDELKKEISQEMFKE
MKIIGQFNLGFIIAKLNGDIFMIDQHASDEKYNFEMLQQHTVLQGQKLIVPQKLHLTAVS
ENILIENIEIFRKNGFEFLVDEEAQVMERVKLVSLPTSKNWTFGPSDIEELIFMLSDSPG
VMCRPSRVRQMFASRACRKSVMIGTALSVGEMKKLLLHMGEINHPWNCPHGRPTMRHLAN
LDIISQD
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgtctgacgtttgtagctctgaagctgcaggagccataaaggccattgacaagcagtca
gtgcatcaaatctgctcaggacaggtggtactgactttggccactgctgtcaaagagctg
gtggaaaacagcattgatgcaggggccactaacgttgatgtcaggctgaaggagtgtgga
gcagaactagtggaagtgtcagacaatggaaaaggggtagaagaggctaactttgaagga
ctgacattgaagcatcacacgtcaaagctgaaggatttctccgatcttatccatgtggag
acatttggcttcagaggggaagccctcagctctttgtgtgctctgagtgtcctgagtgtg
gtgacatgccacgagtccagccaggtggggaccaaactggtgtttgaccacaaaggccac
ctagtgcagcagtctccccatccccggcagcaaggcaccacagtcagcctccagcagctc
ttctacacccttcctgtccgacacaaggagtttcaacgcaatattaagaaggagtatgtc
aaaatgatacatgtcctgcagtcctactgcgtcatctctacaggagtgcgcattacctgc
tccaaccaaaatgggcagggaaagcgcagcacagtcctcagcaccagtggcagccagagt
atgagagacaacataggggctatttttggaccaaaacagctacagagtcttctgcctttt
caacaagagtctcctgcagaaaatgttattgaagaatatggactcaaagatgcagatcta
cctcagcagctgttttgcatgacagggtttgtgtcccgaggagaccacggtgttgggaga
agtgccactgacaggcagttctttttcattaacaaccggccttgtgatcctctgaaggtg
accaaacttgtgaatgaagtgtatcacatgtataacagacatcaatatccatttgtcgcc
ttgaacatagctgtcgcctacgagtgcgtggacgtgaacgtaaccccagacaaacgacag
atcttccttcaggaggaaaaactcttgctggctattctaaagacgtctctcatcaacatg
tatgaggctggagtcaataagatcagcctgaactatacacccatgcccagaaccaataca
aagtctgcatccgacatctgtgctgttgtcccatgcaatgagaacacgccagaccctgga
gaggacatggagccagtgtatcggagctcaaaggcatccgtaaacctggccggcctaaaa
gctgctttttcaagtcatcacggctccaattctgggaacaagtcaaatgtggcaaaagct
gccagcagtggcccaacacagaaaacactgcagtctttttttcaggacactgtcaaacct
tcttcatcatctcctttgaaacccgtaagcggtcagactaagcgctcccgagtgggagat
tcggcgctagatgggttcaggtacggaagacggttatgcagtggtacagactcggaaaag
gacagcgccttgtcagattgtgacctcgctgtggcaacaccagatattcagtgttctgac
ccggcggtcttttctcctgaagagattgacggtgtagaaaaagaaacattggaggaaaca
tcagagaacggtgccactgttcctgagaaccaggaggaacagactgagccgcgcacatcc
aatgaggaccctgctgtgagcccaaatgtcaagagggccaggacagaggagttgtgtttc
ccagcagaacacatgtccagcacagtggatgctccagtctgcctccagaagaggacggtg
cccctccagttctctttacaagatctggcggggaaggtgaagaggctccaggacctgaag
aaacagagggccggtgaggatctgcgctatcgacgcttcagggccaaaatcaaccccgga
gaaaaccagagtgcagaggacgagctcaagaaagagatcagtcaagaaatgttcaaagag
atgaagatcatcggccagtttaacctgggcttcattatcgccaaactcaacggtgacatc
tttatgattgaccaacatgcctcagatgagaagtacaactttgagatgctgcagcagcac
actgtgctccaaggacagaaactcatcgtccctcagaagcttcacctcactgctgtcagt
gaaaacatactcatagagaacatcgagattttcagaaagaatggctttgaatttcttgtc
gatgaggaagctcaggtaatggagagagttaagctggtatctttgcccaccagtaaaaac
tggacctttggcccatccgacattgaagagctgatcttcatgttgagtgacagcccaggg
gtcatgtgtcgaccgtctcgcgtcaggcagatgtttgcctcccgagcttgtcgaaaatct
gtgatgattggcactgctttgagtgtaggtgagatgaagaagctcctgcttcacatgggg
gagataaaccatccgtggaattgtcctcacggcaggcccaccatgaggcaccttgccaac
ctggacatcatctcacaagactga

DBGET integrated database retrieval system