Clinocottus analis (woolly sculpin): 137789517
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Entry
137789517 CDS
T10471
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03430
Mismatch repair
cana03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137789517 (pms2)
03460 Fanconi anemia pathway
137789517 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cana03400
]
137789517 (pms2)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
137789517 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
137789517
NCBI-ProteinID:
XP_068439286
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MSDVCSSEAAGAIKAIDKQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDVRLKECG
AELVEVSDNGKGVEEANFEGLTLKHHTSKLKDFSDLIHVETFGFRGEALSSLCALSVLSV
VTCHESSQVGTKLVFDHKGHLVQQSPHPRQQGTTVSLQQLFYTLPVRHKEFQRNIKKEYV
KMIHVLQSYCVISTGVRITCSNQNGQGKRSTVLSTSGSQSMRDNIGAIFGPKQLQSLLPF
QQESPAENVIEEYGLKDADLPQQLFCMTGFVSRGDHGVGRSATDRQFFFINNRPCDPLKV
TKLVNEVYHMYNRHQYPFVALNIAVAYECVDVNVTPDKRQIFLQEEKLLLAILKTSLINM
YEAGVNKISLNYTPMPRTNTKSASDICAVVPCNENTPDPGEDMEPVYRSSKASVNLAGLK
AAFSSHHGSNSGNKSNVAKAASSGPTQKTLQSFFQDTVKPSSSSPLKPVSGQTKRSRVGD
SALDGFRYGRRLCSGTDSEKDSALSDCDLAVATPDIQCSDPAVFSPEEIDGVEKETLEET
SENGATVPENQEEQTEPRTSNEDPAVSPNVKRARTEELCFPAEHMSSTVDAPVCLQKRTV
PLQFSLQDLAGKVKRLQDLKKQRAGEDLRYRRFRAKINPGENQSAEDELKKEISQEMFKE
MKIIGQFNLGFIIAKLNGDIFMIDQHASDEKYNFEMLQQHTVLQGQKLIVPQKLHLTAVS
ENILIENIEIFRKNGFEFLVDEEAQVMERVKLVSLPTSKNWTFGPSDIEELIFMLSDSPG
VMCRPSRVRQMFASRACRKSVMIGTALSVGEMKKLLLHMGEINHPWNCPHGRPTMRHLAN
LDIISQD
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtttgtagctctgaagctgcaggagccataaaggccattgacaagcagtca
gtgcatcaaatctgctcaggacaggtggtactgactttggccactgctgtcaaagagctg
gtggaaaacagcattgatgcaggggccactaacgttgatgtcaggctgaaggagtgtgga
gcagaactagtggaagtgtcagacaatggaaaaggggtagaagaggctaactttgaagga
ctgacattgaagcatcacacgtcaaagctgaaggatttctccgatcttatccatgtggag
acatttggcttcagaggggaagccctcagctctttgtgtgctctgagtgtcctgagtgtg
gtgacatgccacgagtccagccaggtggggaccaaactggtgtttgaccacaaaggccac
ctagtgcagcagtctccccatccccggcagcaaggcaccacagtcagcctccagcagctc
ttctacacccttcctgtccgacacaaggagtttcaacgcaatattaagaaggagtatgtc
aaaatgatacatgtcctgcagtcctactgcgtcatctctacaggagtgcgcattacctgc
tccaaccaaaatgggcagggaaagcgcagcacagtcctcagcaccagtggcagccagagt
atgagagacaacataggggctatttttggaccaaaacagctacagagtcttctgcctttt
caacaagagtctcctgcagaaaatgttattgaagaatatggactcaaagatgcagatcta
cctcagcagctgttttgcatgacagggtttgtgtcccgaggagaccacggtgttgggaga
agtgccactgacaggcagttctttttcattaacaaccggccttgtgatcctctgaaggtg
accaaacttgtgaatgaagtgtatcacatgtataacagacatcaatatccatttgtcgcc
ttgaacatagctgtcgcctacgagtgcgtggacgtgaacgtaaccccagacaaacgacag
atcttccttcaggaggaaaaactcttgctggctattctaaagacgtctctcatcaacatg
tatgaggctggagtcaataagatcagcctgaactatacacccatgcccagaaccaataca
aagtctgcatccgacatctgtgctgttgtcccatgcaatgagaacacgccagaccctgga
gaggacatggagccagtgtatcggagctcaaaggcatccgtaaacctggccggcctaaaa
gctgctttttcaagtcatcacggctccaattctgggaacaagtcaaatgtggcaaaagct
gccagcagtggcccaacacagaaaacactgcagtctttttttcaggacactgtcaaacct
tcttcatcatctcctttgaaacccgtaagcggtcagactaagcgctcccgagtgggagat
tcggcgctagatgggttcaggtacggaagacggttatgcagtggtacagactcggaaaag
gacagcgccttgtcagattgtgacctcgctgtggcaacaccagatattcagtgttctgac
ccggcggtcttttctcctgaagagattgacggtgtagaaaaagaaacattggaggaaaca
tcagagaacggtgccactgttcctgagaaccaggaggaacagactgagccgcgcacatcc
aatgaggaccctgctgtgagcccaaatgtcaagagggccaggacagaggagttgtgtttc
ccagcagaacacatgtccagcacagtggatgctccagtctgcctccagaagaggacggtg
cccctccagttctctttacaagatctggcggggaaggtgaagaggctccaggacctgaag
aaacagagggccggtgaggatctgcgctatcgacgcttcagggccaaaatcaaccccgga
gaaaaccagagtgcagaggacgagctcaagaaagagatcagtcaagaaatgttcaaagag
atgaagatcatcggccagtttaacctgggcttcattatcgccaaactcaacggtgacatc
tttatgattgaccaacatgcctcagatgagaagtacaactttgagatgctgcagcagcac
actgtgctccaaggacagaaactcatcgtccctcagaagcttcacctcactgctgtcagt
gaaaacatactcatagagaacatcgagattttcagaaagaatggctttgaatttcttgtc
gatgaggaagctcaggtaatggagagagttaagctggtatctttgcccaccagtaaaaac
tggacctttggcccatccgacattgaagagctgatcttcatgttgagtgacagcccaggg
gtcatgtgtcgaccgtctcgcgtcaggcagatgtttgcctcccgagcttgtcgaaaatct
gtgatgattggcactgctttgagtgtaggtgagatgaagaagctcctgcttcacatgggg
gagataaaccatccgtggaattgtcctcacggcaggcccaccatgaggcaccttgccaac
ctggacatcatctcacaagactga
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