Clinocottus analis (woolly sculpin): 137789589
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Entry
137789589 CDS
T10471
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cana03016
]
137789589 (trub1)
Enzymes [BR:
cana01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
137789589 (trub1)
Transfer RNA biogenesis [BR:
cana03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
137789589 (trub1)
Prokaryotic type
137789589 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Trypan_PARP
Pus10_C
Motif
Other DBs
NCBI-GeneID:
137789589
NCBI-ProteinID:
XP_068439406
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MAGNTRNTVAPMACSLFKLQSTNGLFAIYKKKGPTSADVLNTLKEVLLKEAGVKNPNPRK
RKKQSLKMGHGGTLDSSASGVLVVGVGNGTKMLSTMLAGSKKYVAVGQLGKATDTLDASG
SVVLEKDFGHITRLDIEEKLKAFTGNIMQVPPLYSALKKDGQRMSVMLMKGQKVEAKPAR
PVTVYNLTLQEFTPPLFTLHIECGGGFYVRSLVDDLGKALSSCAHVKELIRTKQGQFTLE
EHALHEEKWALEHILRSLQPCPEQKPEQKPEQKPEQEPEQEPEQEPEQEPEQEPEQEPEQ
EPEQEPEQEPEQEPEPEQEPEQEPEPEQEPEPEPEPEPEPEQKPEQEQEQGVCRMDPPKA
DT
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaacacacgcaacactgtggctccgatggcttgttctctatttaaactacag
tcgacaaatggactgtttgcgatatataaaaaaaaagggccgacgtccgcagacgtgtta
aatacactcaaagaagtgttactcaaggaagccggtgtgaagaacccaaaccctcgaaag
agaaagaagcagagcctgaagatggggcacggagggacgctggacagctctgccagtggg
gtgctggttgttggtgttgggaatggtacaaagatgctcagtacaatgctggctggttct
aagaaatacgtcgctgtggggcaactggggaaagcaacagataccctggatgccagcggc
agtgtggttctggagaaagactttggacacataaccaggttggacatcgaggagaaactg
aaagctttcactggtaacatcatgcaagttcctccactctactccgcgctgaaaaaagac
ggccagcgtatgtctgtcatgctgatgaaaggtcaaaaggttgaggccaaacccgccaga
ccagtcaccgtgtacaacctgaccctgcaagagttcacgcctcctctcttcaccctgcat
atcgagtgtggcggtgggttttacgtccggagcttggtggatgacctgggaaaagctctg
tcctcctgtgcccacgtgaaggaactgatccggaccaagcagggccagttcaccctggaa
gagcacgccttgcacgaggagaagtgggcgctggaacacatcctgcgctccctgcagccc
tgtccagagcagaagccggagcagaagccggagcagaagccggagcaggagccggagcag
gagccggagcaggagccggagcaggagccggagcaggagccggagcaggagccggagcag
gagccggagcaggagccggagcaggagccggagcaggagccggagccggagcaggagccg
gagcaggagccggagccggagcaggagccggagccggagccggagccggagccggagccg
gagcagaagccggagcaggagcaggagcagggggtgtgccgcatggacccaccaaaggcc
gacacgtga
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