Clinocottus analis (woolly sculpin): 137789925
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Entry
137789925 CDS
T10471
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137789925 (smarcd2)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137789925 (smarcd2)
PBAF complex
137789925 (smarcd2)
GBAF(ncBAF) complex
137789925 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137789925
NCBI-ProteinID:
XP_068439900
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MASRGGFTSMNMNASPMNVGYAAGMRMPGLPQAPAGYPRSMSSAPQYPQRSGMPSNRVGG
PMGSMGGQMPGPSYGGGNMPMRQGMGPPGMDASRKRFLHLHHQQQQEALGGQRRGPKRRK
MADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYIS
NTYTPSKPEGEEAEKVSSWELRVEGKLLEESGKQKRKFSSFFKSLVIELDKELYGPDNHL
VEWHRMPTTQETDGFQVKRPGDMNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASI
MQALWLYIKNNKLQDCHEKEYINCNRYFRQIFSCPRMRFSEIPMKLASLLQHPDPIIINH
MISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIASLEIKIHETIEYINQLK
TERDFMLSFSNKPQDFIQDWLKSQCRDLKLMTDVTGNPEEERRTEFYQAPWVPEAVGRYV
YSRLQQRRQELEQVLGIRLA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagaggaggattcacctcgatgaatatgaacgcgagccccatgaatgtgggg
tatgctgcgggtatgaggatgccaggtctgccccaagccccggcgggatacccccgcagc
atgagcagcgcgccgcagtatccccagcgctcagggatgccatcgaacagagtggggggc
cccatggggtcaatggggggtcagatgcctggtccttcttatggtggtgggaacatgccc
atgcggcaaggcatggggcctccaggcatggacgcctcgaggaaacggttccttcatctg
catcatcaacagcagcaagaggcactgggaggccaaagacgaggaccaaaaaggcgcaag
atggctgacaaggttctcccacaaaggatccgagacctggtcccagaatcccaggcctac
atggatctcttggcatttgagaggaaactggatcaaaccatcgcccgaaagcgtatggag
attcaggaagccatcaagaagcccatcatgcaaaaacgtaagctcaggatctacatttct
aacacgtacacccccagcaaacctgagggcgaggaggcagagaaggtgtcctcctgggaa
ctgagggtggagggaaaacttctggaggaatctggcaagcagaagaggaaattctcatct
ttcttcaaaagcctggtgattgagcttgataaggagctctatggacctgacaaccactta
gtagagtggcacaggatgcccactactcaggagacggatggtttccaagtcaaaaggccc
ggcgacatgaatgttaaatgcaccctcctgctcatgctcgaccaccagccccctcagtac
aaactggaccctcggttggctcgtctgctgggtgtgcacactcagacccgagccagcatc
atgcaagccctttggctctacatcaagaacaacaagctgcaggattgtcatgagaaggag
tacatcaactgcaaccgctacttcagacagatcttcagctgtcctcgcatgaggttctct
gagattcccatgaaactggccagccttctgcagcacccagaccctatcattatcaatcac
atgattagtgtggaccccacagatcagaagaagacggcatgctatgacattgatgtggag
gtggatgatccactgaagggccaaatgaacagcttcctgtcctctacaaccaaccaacag
gaaattgcttcgctggagattaagattcacgagacaattgagtacatcaaccagctgaag
accgagagagacttcatgctgagcttcagcaataaacctcaggatttcatacaggactgg
ctcaagtctcagtgcagagatctgaagttgatgacagacgtgacaggaaacccagaggag
gagaggagaacagagttctaccaggctccctgggtaccagaggcagttggcagatatgtt
tactccagattacagcagagaagacaagagttggagcaggttttgggtatccgactcgcc
taa
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