Clinocottus analis (woolly sculpin): 137790149
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Entry
137790149 CDS
T10471
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137790149 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137790149 (cstf3)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137790149 (cstf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
TPR_6
TPR_19
VapC50_C
Motif
Other DBs
NCBI-GeneID:
137790149
NCBI-ProteinID:
XP_068440267
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MATEGAAEQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HGVYNKLLTIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSSS
ELKALGYKDVSRAKLAAMLPETVVTPSTPSLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GRQPDTGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggagcagccgaacaggcagcagcagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgaacgacttgtcacg
cagttcccaagttctggcagattctggaaactattcattgaagccgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttacacattgac
ctgtggaaatgttacctctcatatgttcgagagaccaaagggaagctgcctagctacaaa
gagaagatggcccaggcatatgactttgccctggataaaattggcatggaaattatgagc
tatcagatttgggtggactacatcaacttcctcaaaggagtcgaggctgtgggctcgtac
gcagagaaccaacgaatcactgcagtacggagggtgtaccagagaggctgcgtaaacccc
atgatcaacatcgagcagctctggagagattatagcaaatatgaagagggaattaatgtg
cacttggccaaaaagatgattgaggaccgaagtagggactacatgaatgccaggagagta
gcaaaggagtatgagactgtgatgaaggggttggacaggaatgcaccctcagtaccgccc
cagaattcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggag
aaaagcaacccactgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctactggtgctgggccaccatcctgacgtatggtatgaggcagcacag
tacctagagcagtccagcaaactgctggcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagcgaacatctatgaacgtgccattgggactcttcttaagaagaac
atgctgctgtacttttcatttgcagactatgaagaaagtcgcatgaagtacgaaaaggtc
cacggcgtctataacaaactgctcaccattgaggacattgaccccacactggtctacatt
cagtatatgaagtttgccaggagggcagaaggcatcaagtcaggtcgtaccatcttcaaa
aaggctcgagaggatctacgcacgcgtcaccatgtttatgtgacggcagcactgatggag
tactactgcagcaaggataaatcagtggccttcaagatttttgagcttggtttgaaaaaa
tacggtgacattccagagtacatactggcatacattgattacctctcccaccttaacgag
gataacaacaccagggttctgtttgaacgagtcctcacctcaggaagcttgtcaccagag
aagtctggtgagatctgggctcggttcttggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgattcactgccttcaaggatgagtatgaggggaag
gaaacagccttgcttgtagatagatataagttcatggacctgtatccctgctcttccagt
gaactcaaggcccttggatacaaggatgtgtctcgggccaaactggcagcaatgctccca
gagaccgtggtgacgccctctacgccttcactaaaggatgaagctgaccgcaaacctgag
taccccaaacctgacactaatcagatgatccccttccagcctcgtcaccttgcccctcca
ggtttacaccctgtccctggtggagttttcccagtccccccagctgctgttgtcctaatg
aagctgctccctccgcctacgtgtttcactggaccctttgttcaagtggatgagctcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtcgagctgatcact
ggtagacagcccgatacaggaggggaaggcaatggatccatggagaaccatgccgtcgcc
aagtcactcaagaggcctaacgcagattccgacgaggaagacgacaaaggagccgtggct
ccacccatacacgacatctaccgtgcacgccaacagaaaaggatccgataa
DBGET
integrated database retrieval system
