Clinocottus analis (woolly sculpin): 137790310
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Entry
137790310 CDS
T10471
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
137790310 (trip12)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
HECT type E3
137790310 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137790310
NCBI-ProteinID:
XP_068440527
LinkDB
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Position
Unknown
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDQTVAGRLQSEQIKPKANSPPESRRPNSKASKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPGQQSKNEGTRGLKRSEAP
DQISSFAPTPAKKPKSLPPPRDNTSETKKSPAKSKKRALASEAPALSGRAQSKKSGAAGA
SPIQKRKKADSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGPNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGFQAKLASLRKSTKKRSESPPAELPSCRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDLMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPSTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKACQ
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGTNPALNVLQRLCTATEQ
LNLQVDGGLECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSRDVRLKRF
LHVFASCPVQGMEPVGRLDPTDNGPYLAMVHKMNSCLSQMEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVVNPLETYLSSEPPETITFDDPSLEVNLLLRVLHSISRFWFYLFENAVC
KEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLSLWRGEEVTLPNPKGSQEGTKYMFSSK
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEVSIC
SHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFEAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccaaacagtcgcaggaaggttgcagtcagagcagataaaa
cctaaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagctcagccactggccagtccagggggcacagctcaagaagaagcggtcttactctg
tccgtggcttcattcgtgttgcaagacgagccagaggctgcagggacatctgagcaagaa
cgaccaggccagcagtcaaagaacgaaggcacccgtgggcttaagcgaagcgaagctccc
gatcaaatcagttcctttgcaccgacccctgccaagaaacccaaatccctcccaccaccc
agagacaatacctcagagaccaagaaaagtccagctaagtctaagaagagagcacttgct
tcagaagcacctgcattgtcaggtcgagcccagagtaagaagagcggggccgctggggcc
tcaccaatccagaaacggaagaaagcggactccctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcctctgcctccact
tcttcctcttcctccaccacaggcccaaacagcgccaccacgcagggcgcccgagtaaaa
cagggaaaagatcagaccaaggcacgacgctctcgttcagcatcaagcccctccccacgc
cgtagtacccgagacaaggagcaggctaaaactgccagttcttcaaagtttgagtgggca
gcgcgcttcaaccccaaagtcaacctgccaaaacccaaattgtccttgcccggatcctcc
aaaactgagacctccaaacctgggccatcaggattccaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctgtcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgtcaggagaaaatggccgactctgacaacaaccag
gatggggccaactcatcagccgctcgaaccgatgaagcatcccaaggggcttcagcttca
agctcagtcgctggtgcagtgggcatgaccacctctggagagagtgagtcggatgactct
gaaatgggaaggcttcaagccctactggaggccaggggtcttcccccacatctttttggg
cccctgggaccccggatgtcacagctgtttcataggaccattggcagtggcgcgagctcc
aaggctcagcagttactgcaaggcctgcaggccaccggtgacgagtctcagcagctccaa
gctgccattgagatgtgccagctgctggtgatgggcaatgaggaaacacttggtggattc
cctgtcaagagtgtggtgcctgctttgattacactcttacaaatggaacataactttgat
attatgaatcacgcctctcgtgcactcacatatatgatggaggcgctgcctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccaatttatt
gacgtagcagagcaggccctgactgccctggagatgttgtcaaggcgacacagcaaagcc
attttgcaggctggtgggctcgctgactgcctcctctacctggagttctttagcatcaat
gctcagaggaatgccttggccatcgcggccaactgctgccagagcattactccagatgag
tttcactttgttgctgattctctgccactgttgactcaaagactcacacaccaggataaa
aaatcagtcgaaagcacatgcctctgtttcgccaggctggttgacaactttcaacatgag
gagaacctgctgcaggaggttgcgtcacgggacctgttgaccaacattcagcagctgctg
gttgtgaccccacctgtgctcagctcgggaatgtttatcatggttgttcgcatgttttcc
ttgatgtgctctaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
actctgcgtttccttctgtgtggtgcgtcaaatggaagctgccaagaacagattgaactg
gtaccccggagtcctcaggagctctatgaactgacctccctcatatgtgagctgatgccc
tgcctgcctagagaaggcatctttgcagttgatttaatgctgaagaagggcagtgcccag
acaacagagggggcaatctggcagtggagggatgaccgtggactttggcatccttacaac
cgcattgacagccgcattattgagacagcacaccagaacggggaggatgagatcagcttg
tcaaccctgggccgtgtgtacacaattgactttaactctatgcagcagattaatgaagac
acaggaacagcacgtggtatccagaggaaacccaatcctcttgccaaccctagtacaggg
agtcaccaggaggttcgtcgagaggatgcacgagcccagttgatgaaggaggaccctgag
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagttcatcg
gccggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gacgcagagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctatccagtcaggacctgaagattgtagtgggttctcttcagatggctgagatcctc
atgcagaagctgcctgacgtcttcagtgtctatttcagaagagaaggtgtgatgcaccag
gtgaagaacctgtcagagtctgagagctttttagtcactagtcccccaaaggcttgccag
agtggtactgccagtttgtgcactaccactatcagcactgcatccaccacatctgcaaat
aatgcaactcctgatctgggctcacccagcttccagcacagcatggatgactcactggac
ctcagcccacaggggcggttaagtgatgtcctaaagagaaaacggcttcctaagagaggg
cccaggaggcccaaatactctcccccaagagacgatgataaagtagacaatcaggccaag
agccctaccagtactcagtcacccaaatcatccttcttggccagtcttaatcccaagacc
tggggcaagctaggtgcccagaccaacaatgccaactctgagccctcacgcacagcggga
gtgagtggcctggcaagggcacctcccaaggactcaatttcaaataacagagacaaaatt
aaagcctggattaaagaacaggcaagcaagtttgtggagcgctacttcaattctgaaaat
gtggacggcaccaaccccgcactgaatgtactccagagactttgcacagccaccgagcag
ctcaacctgcaggttgatggcggtttggagtgcctggtggagatctccagtattgtatca
gaatctgatgtgtcgtcatttgagatccagcacagtgggctggtgaagcagctcctggtc
tacctgacctcaaacacagacagggacttgctcagccgtgacgtgcgactcaagaggttc
ctccatgtgttcgctagctgtccggttcaagggatggagcctgttggtcgcctggaccca
acagacaatggcccgtacctggcaatggtgcacaaaatgaacagctgcctgagccaaatg
gaacagttccctgtcaaagtgcacgatttccccagtggcaacggcaatggcagcaggggc
tcccaggcactgaagttcttcaacacacatcagctcaagtgtcagctgcagagacaccca
gattgcactaacgtcaaacagtggaaaggtggccctgtgaagatagaccccctggccctg
gtgcaggccattgagagatatcttgttgtcagaggttacggccgaatcagagaagaggat
gaagacagcgacgacgacggttcagatgatgaaatcgatgaatcgctagcggcgcagttc
ctgaactctgggagtgtgcgtcacagactacaattctacatcggtgaccacctgttaccg
tacaacatgacggtctaccaggctgtacggcagtacagtcttcaagcagaagaagaaagg
gagtcgacggacgatgaggcaaatccacttggacgagctggcatctggaccaaaacgcac
acaatatggtataagcctgtgagggaggacgaggatggcagcaaggacgctgtgggtgga
aagaggggtcgagcacagactgctcccaccaaaacctcacctcgcaacgccaagaagcag
gatgagctgtggcatgatggtgtgtgtcccagtgtcgtcaaccccttagagacatacctc
agttcggagcctccagagaccataacctttgatgacccctctttagaggtcaacctgctg
ctgagggtcctgcactccatcagtagattctggttctacttgtttgagaatgctgtgtgt
aaggaaatcatccccaccactgagttcattaacagtaagctgacagccaaagctaaccgt
cagctacaagaccctctggtcatcatgacggggaacatccccacttggcttattgagctc
ggaaagacctgtccgttcttcttccccttcgacacccggcagatgttgttctacgtaact
gcttttgatcgcgatagagccatgcagcgcttactggacacaaaccctgagatcaaccaa
tcagattctcaggacagcagagttgcaccacgtcttgacaggaaaaagaggacgataaat
cgtgacgagctgctgaaacaggcagagtctgtgatgcaggacctcggcagctccagggca
atgttggagattcagtatgagaacgaggtcggcacaggtctcggccccactctggagttc
tacgctctggtgtctcaggagctccagcgggctgatctcagcctgtggaggggcgaagag
gtcacactgcctaatcctaaaggaagccaagaggggacgaagtacatgttcagctccaag
ggactgtttgctgttcccttcggaaggacaaccaaaccagcacacatagccaaaatcaaa
atgaagttccgtttcttaggaaagctaatggccaaagccattatggactttagattgttg
gacctgcccctggggctgccattttataagtggatgctacggcacgaggtgtccatatgc
tcccatgacttggtgaacattgaccctggtgtggcaaagtccatccagcacttggaggat
atcattcgccagaagaagaggttggaacaggaccgatcacagacgagggaaaccctacaa
caggccctggagagcctgaacatgaacggctgctcagtggaggacctgggtttggacttc
acccttccaggattcccgaacattgagctgaaaaagggcggcaaagactttcctgtcaca
atctacaacctggaggagtacctcaggctggtggtgtactggactctaaatgaaggagtg
tccaggcaatttgagtcatttagggaagggtttgaatccgtcttcccattgcatcacctg
cagtatttctatccagaggagctcgaccagttgctctgtggcagtaaatcggagacgtgg
gacgtcaagacgttgatggagtgctgtcgaccggatcacggctacacacacgacagccgt
gccgtgcggttcctgttcgaggtgctgagcagcttcgaggccgagcagcagagactcttt
ctgcagtttgtcacaggaagccccagactgcctgttggtggtttccggagcctgaatccc
cctctgacgattgtgaggaagacattcgagtccacagagaacccggatgacttcctcccc
tcagtcatgacctgtgtcaactacctgaagctgcctgactactccagcatcgagataatg
cgagagaaactgttgattgcagcccgcgagggccagcagtctttccacctttcctga
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integrated database retrieval system
