Clinocottus analis (woolly sculpin): 137790328
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Entry
137790328 CDS
T10471
Symbol
dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
DSCAM family
137790328 (dscaml1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137790328
NCBI-ProteinID:
XP_068440568
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Position
Unknown
AA seq
2082 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
ALYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPSLLDSFQSGEVQVG
HIVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRTTGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNIIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTESVLPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFATRKVQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRVRTSQYTLSDGSTVSHVNISSPQIRD
GGVYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNSFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVYENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVAVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRIAWRKDGQEIVPSSGINIDTKEFMCSLQIPKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAGILNCSVDGYPPP
KVMWKHAKGALAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHLKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITCYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMEVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRMTLHGVLKGYRVVFWTV
FPDGEWGEMQNITTIKEQVELKGLEKFTNYSIQILAYTQAGDGVRSNVLYIQTREDYPGP
PAGIKTVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPLPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILANGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTHINS
SHARLNLQGWASGGCPISAVILEFRPKGTWAWQNVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIPPIKSPLEKNDDVKKLFSIGCPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGEDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSAHSIRNRYSSQWTLTKCQSSTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRAYHTQGRHVAMDSAKQQALTMGHSGLSNLTSSGGALG
GCGGGSGGASAVSSSSTLPQRTLTMPGSSSSVAQSAAAAAATAAAAATSSSGATGGTPGG
ASSSKMGGSRDSLLESSSSGLGRLQKQRDGGAGAYSKSYTLV
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaagatgtt
gtctccacgcggctgtactttgtgaacgcctccctgcagcgggtgaccttctccagctcg
gtgggggtgtccctgccctgccctgcgggcggcgccccccatgccgtcctgcgctggtac
ctggccgccggagacgacatttacgacgtgccccatatccgccacgtgcacgccaacgga
accctccagctctacccgttctccccatccgcctacaacagcattatccacgacaacgag
tacttctgcactgctgagaaccaagccggcaagattcgtagccccagcatccacatcaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggcaat
gttgccgtgttcaagtgcctcatcccctcagccgtccaggagtacgtcagcgtggtgtcc
tgggagaaagacacggtctccatcgtcccaggtaaccgctttttcctgacctcatttggc
gctctgtatatctcagaagtgcagaaggaagacgctctgtccacctatcgctgcatcaca
aagcacaagtacagtggagagactcgccagagcaatggagccagactctctgttatggac
cctacggagtccaccccgtcactgctggacagtttccaatccggtgaggtacaggtgggg
cacattgtggagctgccctgcatcgcttccggatacccaaaccccaccatccgttggtta
aaggatggtcggccattacctgcagactcccgctggacgcggcgcaccacaggcctcact
atttccgatttgaggctcgaggacagtggcaattacatctgtgaggtcaccaatagcttt
ggctccaaagaggtgacgggtcacctcaacatcatagagccactgcgggtcaccttgtcc
cccaagaacctgaagacagggatcagcagcacagttatcctatcctgtgccgtccagggt
tccccgcactttactgtgtcctggtaccgtaacacagaatctgtgctgcctgatcagcac
ttttccatccagggggctcacaatgagacattgttcatttccgctgcacaaaagagacac
tcgggagcttaccagtgctttgccacacgcaaagtccagaccgcccaggacttctccatc
atactgctcgaagacggtacaccccgcatcgttgcctccttcagcgagagggtggtggtc
ccgggtgaaccgttttccctgatgtgcgctgccaagggagcacctccccccaccatcacc
tggaccctggacgatgagcctgtggcccgggacctgtcgcgtgtccgtactagtcagtac
acgctctcggacggcagcactgtgagccacgtcaacatcagcagcccgcagattcgcgat
ggaggagtgtatcggtgcgccgcacgaaactcggccggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtcctccgaggattcggcctatgaaaaacatcactgcagtggcggga
agaaactctttcataaactgccgtgtgattgggtacccttattactcaatcaactggtac
aaggagggtcttctgctccctgacaatcatcgccaggtggtgtatgaaaatgggactctg
aagctcagtgacgttcagaagggcatggacgagggggcctatgtctgcagcgtgctcatt
caaccacagctctttatcactcagactgtctatgttgctgtcaaagttcctccactgatc
cagccatttgactttcccccgacttccattggtaaattgatgtacattgcctgcgtggtg
tcgtctggagacatgcccatacgcatcgcatggcgcaaggacgggcaggagatcgtgccc
tcatctggcatcaacatagacacaaaggagttcatgtgctctctccagatacccaaggtg
tcgctcaaacacaatggcaactacacctgtatcgccagcaatgatgccgccactgtcagc
acggagaggcagctcacagtaacagtgcctcctcggtttgtggttcagcccaataatcag
gatgggatctatgggaaggctgggatcctaaactgttcagttgacggataccctcctcct
aaagtcatgtggaagcatgccaaaggtgcattagcgggtattgggaatccacagcagtac
caccctgtgcctttgacgggccgtatccagatcatgaataacggctctctactcatcaga
catgttttggaagaagatcgtggattctacctctgtcaggcctccaatggcgttggctcc
gacatcagcaagagcatggttctcaccgttaagatcccagctatgatcaccagtcaccca
aacactaccatggcgaagaagggtcacttgaaggagctgaactgcacagcaaggggagaa
tggcccatcatcatccgctgggagagaggcgacacggtcattgaccctgaccgcaacccc
cgatactccattaccaccagtcccaatgagaagacagacgaggtgttgtctacgctcaag
ctaaagccagcagagcgtgaggattcagtcttcttctcctgccatgccattaactcttat
ggagaagggcgtggccttatccagctcactgtgcaagagcccccagaccctccggagttg
gaggtgcgtgaagtcaaagatcgcagtatgaatctcaggtggacgcagcgatttgacgga
aacagtgtcattacctgctatgatattgagtataagaacaagacagattcctgggagctg
aagcatgctactcgaaacatctcccccaccaacaatcaggcaaacatagtggaccttcac
cctgcctctgtttacagcatccgcatgtactcctacaatgcgataggcaagagcgaggcc
agcaaggaactcaccatcagcacagaggaagcacagccggatggtcctcctatggaggtg
atcctacagccggtaacctctcagagtatcagggtcacctggaaggctcccaggaaagag
ctgcagaacggggtgatccggggttaccagattggttacagagagaacggcccgggcagc
aatggtcagtacagcattgtggagatgaaggccactggagacagtgaggtctacaccctg
gacaacctgaagaagtttgcccagtacggtgtggttgttcaggccttcaacagagccggc
acaggaccctctagctcggagatcaatgctacaacactggaagatgtacccagccagcct
cctcagaacgttcgagccatttctgtaacatcggacgaggcagtgatcacgtgggcggag
cctcccaggatgacactgcacggcgtgctgaagggctatcgcgtcgtgttctggactgtg
tttccggacggagagtggggtgaaatgcaaaacatcacaaccatcaaggagcaggtggag
ctcaaaggcctggagaagtttaccaactacagcatccagattctggcctacacccaggcc
ggagacggtgtccggagcaatgtcctgtacatccaaacccgtgaagactatcccggaccc
ccagctggcatcaaaactgtgccctcctctgccagcagtgtcgtggtgtcctggttacct
cctcacaagccaaatggaatcatccgcaaatacaccatctactgctccagccccggctcc
ggccaaccgctgcccagtgagtatgaagccaatccagagctacttttctacagaatcact
cacctcaaccaccggcagcaatacctgatctgggctgcagccgtcaccacagcaggccgg
ggaaacttcagtgacaaggtcactgttgagccagcagccaaggccccagctaagatcctg
tcatttgggggcacagtgactactccctggatgaaggaggtgcgactgccctgtagctca
gtaggagaacctacacctactattaaatggaccaaagacagtgaggacacagccatccca
gtgtctctagatggacaacgtctcattctggccaatgggacactagtgctgcgctctgtc
aaagctgaagattctggttactacacctgcaccgcaaccaacacgctaggctttgacacc
atcattgtcaaccttttggtacaagtccctccagaccagcctcgtctgaccgtttccacc
acctccacctcctccatcactctggcttggataccaggagacaacggaggcagctctatc
agaggttttgtgcttcagtactctgtagacaacaccgaggaatggaaagatgttttcatc
agttctagtgaacgctccttcaaattggacaacctgcgctgtggcacctggtataaagta
aagctggccgcaaagaacagtgttggagctggacgcatcagtgagatcattgaggcaaag
acccatgggcgagaaccccagttcaacaaagatcagccggtctttacccacattaactcc
agccatgcccgcctcaacctgcagggttgggccagtggaggctgtccaatcagtgctgtc
atactggagtttagaccaaaaggtacatgggcatggcagaatgtacgtaccaatgccacc
acagatgtgtttctggcagagctgcgtgaggcaacctggtatgagttgaagatgaaggcc
tgtaacagcgctggctgtggcaaccagagctctcaatttgcaacactggactatgatggt
agcacaattccaccgatcaaatcccctctggaaaaaaacgatgacgtcaagaagctgttt
tcgattggctgtcctgtgatcttggtcacactcggtgtcgcactgctcttcatcattcgc
aagaaacgcaaagaaaagaggctgaagagactaagagatgccaaaagcctggcagagatg
ctgatcagtaaaaacaaccgcagctttgacaccccggtgaagggacctcctcagggccca
cggttacacattgacatccccagagtgcagctgctaattgaagacaaagaaggcatcaag
caaatcggtgaggataaagccactatccctgtgacagacacagagttcaatcaaactggc
aaccctcagagcttctgcacaggcgtgtccgtccaccaccctgccctcatccagaacacc
ggtcctttgattgacatgtcagacataagaccagggaccaacccagtgtcaaggaagagt
gttaagtcagcccacagcatcaggaaccgctactccagtcagtggactctgacaaagtgc
cagtcctcaacgccagcccgcactctcacctcagactggcgcacagttggctcccagcat
ggcatcactgtcacagagagtgacagctacagtgccagcctttcacaggatacagataag
ggtcgcaacagcatggtatcgacagagagcgcctcctcaacttacgaggagttggcaaga
gcttatgagcatgccaagctggaggagcacctacagcatgccaaatttgagattactgag
tgctttatctctgacagctcatctgaccagatgaccacaggtaccaatgacaatgcagat
agcatgacgtccatgagcacaccctcagagcccggtatctgccgtttcactgcctcacca
cccaaaccccaggactatgatcgtggcaagaatgtagctgtgcccatcccacatcgcgcc
aagagtgactactgcaacctacccctctacatgaagtcagatcccttctttcgaaagcag
tcggagcatcatgacccatgtccagtggttccaccacgtgaagcatctattcgtggcctt
gcgcagcgagcctaccacacccaggggcgccatgtggctatggactctgcaaagcagcaa
gcccttaccatgggccactctggcctgtccaacctcacttcctctggaggagcattagga
ggctgtgggggaggcagtggaggggcatctgctgtctctagcagctccacacttccccaa
aggactctcaccatgccaggctcttcttcctcagtggcccaaagtgcagcggcagctgct
gctactgctgcagctgctgcaacgtcatcctccggtgccacaggagggactccaggaggt
gcctcctcctccaagatgggaggatccagagactctctgcttgagagcagctcctcaggc
ttaggcagactacaaaagcagagggatggaggggcaggggcttactccaagtcatacaca
ctggtgtag
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