Clinocottus analis (woolly sculpin): 137790360
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Entry
137790360 CDS
T10471
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04270
Vascular smooth muscle contraction
cana04625
C-type lectin receptor signaling pathway
cana04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
137790360 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137790360 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
137790360 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137790360 (arhgef12a)
Membrane trafficking [BR:
cana04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
137790360 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
HEPN_AbiU2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
137790360
NCBI-ProteinID:
XP_068440623
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MSDTQSSFSDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSALDRLSFTQPPWDENSSVCNQRVDMLQKMLSKEQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFETEHSKGDCNSTDLSWSRSLISR
GFGPGSPESLYPRDSCYPSPKSTPRNSFNSCHSPEAEDATDLDSLSPTTVSSPASCRLIS
QIIGAEDDYFDSDQEQTNGQCNSFNNIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLHAD
FYKLTNSKETRRVFMDLHTFFIDRGANLKVAVPESISTDLDRRRTELIPEEINRQHVQTL
QDSLLPDIQRNLEDFRQKRSMGLTVAEVELARLDQERVRDRVALERERSYAENIITKIED
ILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKEG
EEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGASDHMEAGRLRGS
QSSEGSELMHSMSINASIPNSATYSSDSSRDTDIGGTSTPGPSRLSDSHQSDPLDGLPYP
ASQFDVYSLDQLQEDDRESDRAHEGTPKVIRRFEGLGAADVQSEDDQGTDSEHDPPNWQQ
LVGREVLEGLRPQEIKRQEVINELFYTERAHVRMLRVLDHVFYQKLSKETILPPADIKNI
FTNLDEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFIDGEEEKIKKAVGTFCSNQ
PFALEIIKTKQKKDSRFTSFVQEAESNRQCRRLQLKDIIPVEMQRLTKYPLLLDNIAKYT
DNTVEKDKVKQAADGCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELK
NLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLQDILVLLQKQDERLILKCHSKNLAGTAD
TKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVSDQRTWQRLITQRA
DAMKVKPHSVIPLPQTDGERDGVEIITAGVSRSRDSDRISTGSTQSTDKESSPAPRSVTQ
SSLPSNNPFEGIKAEEEEEGFVDPDLPSQVAEDGKEGDSFNMFPSKADEALKTLAALKQV
LVTQLMSQEALEQTKRSTGVRLLRTTSLRTPVDSRARGMVHNGSEKNSSQTEDPIQDLGS
GDTGFFDSPEDYAGFLVLEGYGGPGESSTDDDILASTTGKQLRSSQGCAADSGINLRFSS
TSQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRPERSAADTDGNKDKR
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttctctgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccggacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcttgtggtctggttcaacgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcaactt
gtcaaagaagatggggctgccatgcgggcaggtgttcagacaggagataggatcatcaag
gttaacgggacccttgttacacattcaaatcacattgaggtggtgaaacttatcaaatcg
ggctcctatgtggcgctcacagtgttggggcgtcctccagggctcgcccagatcccttta
tctgaagcagagtccgaaatgttgggggttagtatttcgtctccaaactccccagcagca
gaacggccctacagtgctctggaccgcctctcctttactcaaccaccatgggatgagaat
agcagtgtctgcaaccagagggttgacatgttgcaaaagatgctctcaaaagagcagcag
gagctacaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggagatgcagatgatggcagcatgtttgagacggag
cactctaagggagactgtaacagtacagacttgtcctggagtaggtctcttatatctcgc
ggatttgggcctggatctccagagagcctttacccaagagactcatgctaccctagccca
aagagcacccccaggaacagcttcaactcctgccactctccagaggcagaggacgccact
gacctggactctctgtcccctaccactgtcagcagtcctgcttcctgccgcctcatctct
caaattattggagctgaggatgactattttgactcagaccaggagcagacaaatggccag
tgtaacagctttaacaacattgagcagctcaagtctcgtcccgcacacctcgcagccttt
cttcaccacgtcatctctcagttcgaccctgctcctgtgctgtgctacctccacgctgac
ttctacaagctgaccaactccaaagagaccagacgggtgttcatggacctccacaccttt
tttattgaccgtggagcaaacttgaaagttgctgttcctgaatccatttctactgatctc
gaccgccggcggacagaactgatccctgaggaaataaacagacaacatgttcaaacactg
caggactctctgcttcctgacatacagcggaaccttgaggatttcaggcagaagcgcagt
atgggcctaacagtggctgaagtagagctggccaggttggaccaagagagagtcagagac
cgtgttgctctggagagagagcgctcatatgctgaaaatatcatcaccaagatagaggac
atcctgttaactactcagaccacagaggaagagaaatgcactacaatgcagtatgtcatc
tatacatacatgaagcaccttggggtgagggtcaaggaacctcgaagtctggagtccaaa
cgtgtcaggatcaacttccttcccaagatcaagaaaagcatcaagacagaaaaggaagga
gaagagaaggtgaagaaacccagattccctagtatccttggacctcagcgtcggcccagc
cgcattgaagcagcatctgtaggcaaagccttggatggtcgcccccggccgcagaaacag
ttgtctcagccgacactaggggcaagtgatcacatggaagctggtcgacttagaggcagc
caatcgagcgagggctcggaacttatgcactccatgtcgatcaacgcctcaatcccaaac
agcgccacctatagctcagacagtagtcgagacactgatattggtgggacttcgacccca
ggcccgtccaggctgagtgacagccatcagtccgacccccttgatgggttgccgtaccct
gcttcgcaatttgacgtttacagcctggaccaactccaagaggatgacagagaaagcgac
agagcccacgagggaacaccaaaggtcataagaaggtttgaaggcctgggtgcagccgat
gtccagagtgaggacgaccagggaacagactctgagcatgaccctccaaactggcagcag
ctggtgggacgagaggtcctcgagggtctcaggcctcaggaaatcaagagacaggaagtc
atcaatgagctgttttataccgagcgtgcacatgtgaggatgttgagggttttggaccac
gttttctaccagaagctctccaaagagaccatcctgcctcctgctgatatcaagaacatc
ttcaccaacctggacgagattctacagctgcatgtttcaatactagagcaaatggctgct
gttcggaagagaaatgagtcttcagtaattgatcagataggagacgacttgctctcctgg
ttcatcgatggagaggaggagaagatcaagaaggcggtcgggacattctgcagcaatcag
ccatttgctcttgagatcatcaagaccaagcagaagaaagactcgcggtttacttcgttc
gtccaggaggcagaaagtaacagacagtgtcgccgactgcagcttaaggacatcattcct
gtcgagatgcagcggctcacaaagtaccctctgctacttgacaacatcgccaagtacaca
gacaacaccgtagagaaggacaaagtgaagcaggcagcagacggctgtcgaaagattctc
aatcacgtcaaccaggctgtgaaggaatctgaggacaagcagaggttggaggactatcag
agaagattggacctctcttctctgaagcagacagacaaccccatgatcctggagctgaaa
aatttggatttaaccaagagaacgatggtgcacgagggacctctgtcatggaaagtgaac
aaggacaagactattgagttgtacacgctcctgctgcaggacatcttggttctgctccag
aaacaagatgaacgtctgatcctaaagtgtcacagtaaaaacctggctggcaccgcagat
accaaacatatcttcagccccatcatcaaactcaacactgtgctggtgcgctctgtggcc
acagacaacaagtccttcttcgttctatccatgtcggaaaacggagcccagatctatgag
ctgatggcgcccacagtctcagatcagagaacgtggcagcgtctaatcacccagagagct
gatgccatgaaagtcaaacctcacagtgtcattccattacctcagactgatggggagaga
gacggtgtggagatcattacagcaggtgtttccaggagccgagactcagaccgcatatcc
accggcagcacccaatccacagataaagagagcagtccagcccctagaagtgtgacgcag
agttctctaccaagtaataatccatttgagggaataaaggcagaggaggaggaggaaggt
tttgtggacccagaccttccttctcaagtggctgaagatggcaaagaaggagactcattc
aacatgtttccctccaaagcagatgaagcactgaaaacattggcagcattgaagcaggtg
ttggtgacccagctcatgtcccaggaggctttagagcaaaccaaacgctccacgggggta
cgtctcctcaggaccacctctctgcggacacctgtagacagccgcgctcgggggatggtc
cacaatggctcagagaagaacagctcccagacagaggacccgatacaggacctgggttct
ggggacacgggcttctttgattctcctgaagattatgcagggtttttagttctggagggt
tatggtggcccaggggagagcagcacagatgatgacatcttggcatcaaccacaggaaag
cagctgagatcctcacagggctgtgctgccgactctggaatcaacctgcgattttcctca
acgtcgcaggccggcagcctctcctcttttagcagacaggtcttgtctcatcttagaaac
cttcaggccaacctcaactatctgaaggaggttgaggccaagtacaataatctaatacgc
caaaggccagagaggtcagcagcagacacggatggaaacaaagataaaagatag
DBGET
integrated database retrieval system
