Clinocottus analis (woolly sculpin): 137790366
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Entry
137790366 CDS
T10471
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03440
Homologous recombination
cana03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137790366 (brca2)
03460 Fanconi anemia pathway
137790366 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137790366 (brca2)
03036 Chromosome and associated proteins [BR:
cana03036
]
137790366 (brca2)
03400 DNA repair and recombination proteins [BR:
cana03400
]
137790366 (brca2)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
137790366 (brca2)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
137790366 (brca2)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
137790366 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
137790366 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
137790366
NCBI-ProteinID:
XP_068440634
LinkDB
All DBs
Position
Unknown
AA seq
3021 aa
AA seq
DB search
MTLRHKSQHYPVMSVYSDVPHRKLEGLLQSPGMDLTSINMYETYKDDIWKALGPLDPDWF
EALTSQMLSEGNVSDQEDLCGNQEANFKAPFDKTAVDSQLFSTPKVFRHNRVVSPETEEE
QSFTEKETLPWTTTQSPYLFQMSKERIPDANNRGFRHDRFDLLQTPLKSPVSYDKQISES
LGAQLHPDISWTSSLNTPPAIPSTLILSKSDDSPCPVSFSADTNVVFVRKLFPSLSNASR
VGVLSPKNKDVSTVLPGVNSPEAVHHPESHDSPQSSLNQSDLVWKQTLPDAIEDGEIRRT
VAGVVDGAENVLSMFFTNSNSALRKVKTDKIKRKPIISTKEHGCSSTDVSSTNNAASRDQ
RAVDQEPGRLPSPPPVKTVDSGITQWSPLNLSELPPCTVTTTCHNNSPAVEIKISTEQLH
HGSDSGQLLSRPLVKHTDFGFVKKKRKFVYSVETPKLQVQGEETQGRRIDSSRSVPDSGQ
EVNVKLLKAPDEADCCSVGINEMQKQGNLADVNLRPSLQPKVQDLDMSQLCKDFAQDFSQ
MSEPCKLSKVAEDTPGNGFSPSTCLSAMKRAKQKAMQANLYHDCDGGDDRRQISTAHQSN
LIHETTISDSGFQSAIADSAHGTAPSFVLPSSEIKGLQWTDKQRPAPVTSANNGNEKARL
DDILQAAETDAKRSSAIRESQTLGPGSESELHIESASARRPSCEKEAVDSINCISLNGQA
RGNLPGKRVSHPSVHPSGFTTASNKGVHISSANLQRAKHLFAETEGERTSSDQPNKDERS
VSHGSVNYPTTNANQPFSSRETNENIRCQLTASQRADVTELCTLLEEADSQFEFTQFKTE
KPNQNCQDNAASPPKVDKELDPDFLSGIDFDDSFSSEAEKHLLITVMPDKMTTSDGKTNC
ETSNSTSAVQKENATPKEASSASKPISEGSESVMSAEPKSLDGAGHELKNKTPLMLGAGF
KTAGGNVLRVSKKCLSKAKALFADLEENLVTSRAPPDKQSSETNARRQFRCSVDNPTYNF
QHHKEDDSTITGCDGDTEGGVQGRFSNTNRRVTGIQDGKAAKSLIHSKRDTTACQSGFQM
ASGKGISVSAKAMQEAEALFRDCDAIDCNADKKSVDALPGSVGHEETLPKCEIQGMKANW
SKESVSEFEDVNAGPAVRQTEVVQHKEETKTLALTNAPSSHEKPYWTAKALSSLSCTTSK
NIGSSTNHALSNGGGFCTASGNKVSMSADALNKAERLLNDIPTLEDEDKQLKRKGDALRT
GHLCNPIQDVPLKSGGFQTASSKGVANSSAALKKGKLLSECDEVEDKVFVKPTHSNMPVP
GPTPRNSGFLAASGKRVAISAEALQKAKALFRDISFNAETPAVPDTRNNNNKTQDNAEVA
EKIHCGFSTAGGAKVHVSKTNLQEAKNLLTEFDDGCISAEAMQEADAFFKNCDIMDGYDD
MSVEQKKSVAPACGSGSEKKKLSRCEEDQRLKINVSEELGRGHAELVGNHEKMLHPDDLK
IHKGAFKKTSDVSNAVALHGNPSSMTKTLPPPLCTTSKNISSSAMNELSKGGGFCTGSGK
KVSVSDGAMAKAKSLLNESASFKDPNKTLKQKENTFPPQNGGFQTASGKGVSFSSAALKK
AKTLFCEIDDVEDKIFVQPSPSKMLVPGPTLRNSGFLAASGKQVAFSSEALQKAKALFSD
ISFNAETPAVPDTRNNDKTQDNAEVAEKIHCGFSTAGGAKVHVSKRNLLEAKNLLTEFAD
VECHDSNSTSPRGIRKSDLSKVKSVKISCNPSTVGDMDMFSAPQVVKSLSSLQDYDAENE
SPQRASVSGCIFIKDQAHAEAFRVNEGQITPAVLDYKIQQTSSRQGSKVKRPQVSSALNF
QSLNLSGCTETQQKLFAQEALDCTKALLEDEGLASQSLSMTLENATHGSVVEPHGTGKRS
REDPDIIGQPPLKRRLLEEFDRTVDGPRSSTLHPEKSSPNGVMKDRRIFKYSVSLHPNIT
RPHTNGNGYVETRLQNTTPTRHSTPEESRSAHSGKPAFVPPFLTNTKTESRRNTMLKDNI
RTPSAFVPPFKKPFVQESFAKPEVEGKEDKHHNLFVTPFNRNTYVPPTHKKQSASEITAD
KSKDIETVALAHNINDNLIHNENLPVGCGSEDSAADTSHVEDRLSRCQDVFQNLQNVELA
RDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVTRISLKAAVNGMPPAKYSPKQLYGHGVHQ
HVCEISGETAESFRFHLKQFIKREAFPGGGGVQLADGGWLIPSKDGTAGKEEFYRALCDT
PGVDPKLISEGWVDNHYRWVVWKQACMERSFPETMGGLCLTPEQVLLQLKYRYDVEVDNS
RRPALRKITEKDDSAAKTLVLCVCGVVSRGHSPSRRSFNDTKTPQGADAKVENPSAVVWL
TDGWYAIKAQLDEPLTAMLHSGRVAVGGKLIIHGAQLVGAQEACPPLEAPNSLMLKICAN
STRPTRWDTKLGFHKDPRPFLLPLSCLYRSGGPVGCVDIIILRSYPIQWMERKPDGGIVF
RSVRAEEKEARRHNGHKQKAMEILFAKIQDGFEKEDKGNDKPQSRRRTISRQGIESLQTG
EELYEAVGEDPAYLEAHLSEQQMETLSTYRCSLMEKRQAELQDRYRRALESAEDSEGSCP
KRDVTPVWRLCVADSMDQHGSVYQLNLWRPTSDLQSLLKEGCRYKVYNLTTSDGKKHGGS
TAVQLTGSKKTQFQHLQAPQEWLSTRFQPRVSARFVDLQNPEFQSLCAEVDLTGYVISII
DGQGFSPALYMADGRLNFVKVRCFSSFAQSGLEDLVKLRVQLALSNLQLRGQSISPTPVV
YAGDLTIFSTNPKEGHLQESLSRNKNMVQSQENFFLIAEEKLSHLVRSDSLRSISSPALQ
TQTTACKTVRRQDTKTTGTPQQLVRSLGSFTPVSRKPPGANCSTEKDPISTKRRKAVDYL
SRIPSPPPLLHLGSEASPCVNKTFNPPRRSWTPSTLNTAQTPARKPVNSPVEDEWVNDEE
LAMIDTQGLHDGDLLQEHKTV
NT seq
9066 nt
NT seq
+upstream
nt +downstream
nt
atgacattgagacataaaagtcaacactaccccgtcatgtccgtctactcagatgtgcca
catcgcaaactggaggggttacttcaatcaccaggaatggatttaacctctataaacatg
tacgagacgtataaagatgacatctggaaagcgctgggacccttggatcccgactggttt
gaggcactgacatctcaaatgttgtcagagggaaatgtctccgatcaagaggatctgtgt
gggaaccaagaggcaaactttaaagctcccttcgacaaaactgcagtagacagtcagctg
ttctcaacccccaaagtcttcaggcacaatcgagttgtgtcacccgaaactgaagaggag
cagtcgttcactgaaaaagaaacattgccatggacgacaacccaaagtccatatttgttc
cagatgtcaaaagagaggatcccagatgcaaataatagaggtttccgtcatgatcgtttt
gatctgcttcagaccccactcaaatccccagtcagctatgacaagcaaatatctgaaagt
ctgggagcacagcttcatcctgatatctcatggaccagttctctgaataccccaccagcc
ataccatccaccctcattttgtctaaaagtgatgacagtccctgtccagtgagtttttct
gccgacacaaatgttgtgtttgtacggaagcttttcccctctctgtcaaatgcatccaga
gttggagtgctgtcacccaaaaacaaagacgtatctaccgtcctcccaggcgttaattcc
cctgaggcggttcatcatccagagtcccacgactccccccagagttcactgaatcagagt
gacctagtttggaaacagacactaccagatgctattgaggatggagaaattcgcagaaca
gtagcaggtgttgttgatggagctgaaaatgttctttcgatgtttttcaccaacagtaac
tcagcactgaggaaagtgaaaactgacaaaatcaaaagaaagcccatcatttcaacaaaa
gaacatggctgcagctctacggatgtctcatcaacaaacaatgctgcatccagagaccag
agagcagttgatcaggaacctggcaggcttccctcacccccaccggtgaaaactgtagat
agtggaatcacccagtggtctccgttaaatttatctgaactcccaccttgtactgtgact
actacttgccataataatagtcctgctgtggaaatcaagatttcaacagaacaactgcac
catggctctgactctgggcagcttttatcgaggccactagtgaaacacacagactttgga
tttgtcaagaaaaagagaaaatttgtttacagtgttgagactccaaaactgcaagttcaa
ggagaagaaacgcagggtcggaggatagattcatcacgatcagttccagattctggacaa
gaggttaatgtgaagctgttgaaagccccagatgaagcagactgttgcagtgtcgggata
aatgagatgcaaaaacagggaaatctcgctgacgtaaatctacgtccttctttacaacca
aaagtccaggatcttgacatgtcgcagctttgcaaagattttgcacaagatttcagtcaa
atgtccgaaccctgtaaactgagtaaagtagcagaggatactcctggaaacggcttttct
ccatcgacttgtctgtcagccatgaaacgagctaagcagaaagcaatgcaagcaaacctt
taccatgactgtgatggcggcgatgacagaagacagatttctaccgctcatcaaagtaac
ctaatccatgagacaacaataagtgacagtggattccagtctgctattgcagatagcgca
catgggactgcaccatcgtttgttcttcccagctcagagatcaaaggtctacagtggacc
gataaacaaaggcccgctcctgtcacatctgcaaataatggcaacgaaaaagcccgattg
gatgatattttacaagcagccgaaacagatgccaagcggtccagcgcaatcagggaaagc
cagacactcggccctggcagcgagagtgagctgcacatagagagcgcatcagcccgacgg
cccagttgtgagaaagaagctgtcgatagcattaattgcatttcacttaatggtcaagct
cgtggcaatctgccagggaaaagagtttcacatccttccgtccatccatcaggattcaca
accgcttcaaataagggtgtacacatttcttcagccaacctgcaaagagccaagcatctc
tttgctgagactgaaggggaaagaacttcaagtgaccagcccaacaaagatgagaggagc
gtgagtcacggatcagtgaattatccaaccactaacgcaaaccagccattttcttcacgt
gaaacaaatgagaatatccgttgccagttaacagcttcacaaagagctgatgtaactgag
ctgtgcactctcttggaagaagcagatagccagtttgaattcacacagtttaaaacggaa
aagccgaatcaaaactgtcaggataatgccgcctctcccccaaaagttgacaaagaactt
gacccagattttctttcgggtattgattttgatgacagttttagttcagaagctgaaaag
cacctgttaataactgtgatgccggacaaaatgaccacctccgatggtaaaacaaactgt
gaaacatctaattccacaagcgcagtccaaaaagaaaatgccactcctaaagaggcgtct
tccgcttcaaagcccatctccgaaggcagtgaaagtgttatgtcagctgaacccaaaagt
cttgacggagctgggcacgagctgaagaacaaaactcctttaatgcttggggcgggattt
aagaccgcaggaggaaatgttttgagagtctctaaaaagtgtctgagcaaagccaaagct
ttgtttgcagatttggaggagaatcttgtgacgagtcgagcgccaccggacaagcaaagc
agcgaaaccaatgctagaaggcagtttaggtgcagtgttgataatcccacttataacttt
cagcatcataaagaggatgattctacaatcacaggttgtgatggcgatactgaggggggg
gttcaaggccgtttttccaacacaaacagacgggtcacaggcattcaagatggaaaggct
gcaaaaagtttaatacacagcaaaagggacacaaccgcgtgtcaaagtgggttccagatg
gccagtggaaaagggatttcggtttcagcaaaagctatgcaagaggcagaggctctcttt
agggactgtgatgcaattgactgtaacgctgacaaaaagagcgtagacgccttgcctgga
agtgtcggtcatgaggaaacccttccaaaatgtgaaattcaaggcatgaaagcaaactgg
tccaaagaatcagtcagtgagtttgaagatgtgaatgcaggaccagctgtgcgccaaaca
gaggtggtacagcataaagaggagacaaaaacgctggctttaacaaatgccccctcttcc
catgaaaagccgtattggactgcaaaggcactttcatctctctcatgtacaacatcaaag
aatattggctcttctaccaaccatgcattgagtaatggtggtggattttgtacagccagt
gggaacaaagtgtccatgtcagctgatgcactgaacaaagcagagcgtctcttgaatgac
attcctacacttgaggacgaggacaagcaacttaaaagaaaaggggatgctttaagaacc
ggccatctctgcaatccaattcaagatgtaccacttaaaagtggtggatttcagaccgcc
agtagcaaaggagtggccaattcatctgcagctctcaagaaaggaaagttgttgagtgaa
tgtgatgaagttgaggataaagtctttgtaaaaccaacccattctaacatgccagttcct
ggtccaacacccaggaatagtggatttcttgcagccagtgggaagcgagttgcaatttca
gctgaggccctccagaaggcaaaagctctcttcagggacatcagtttcaatgcagagacc
ccagctgttccagacacaaggaacaacaacaacaagacacaagacaatgctgaagttgca
gagaaaatacattgtgggttctcaactgcagggggcgcaaaagtccacgtgtcaaagaca
aatctgcaggaagcaaaaaaccttttgacagaattcgatgatggttgcatctcagcagaa
gcaatgcaagaagcggatgctttcttcaagaactgtgacattatggatggttacgacgac
atgtcagtcgaacagaaaaaaagtgtagcacctgcctgcggaagtggcagcgagaagaaa
aagctttcaagatgtgaagaagatcagaggttgaaaataaacgtatctgaagagcttgga
aggggacacgctgaattagttggaaaccatgaaaaaatgctgcatcctgatgatttaaag
attcacaaaggtgcttttaagaagacatcggatgtttccaacgcggttgctttacatgga
aacccatcttcgatgacaaagacccttcctcccccgttgtgcacaacatcaaagaacatt
agttcctctgccatgaatgaattgagcaaaggtggtggattctgtacaggcagcgggaaa
aaagtatctgtgtctgatggcgcaatggcaaaagcaaagtctctgttgaatgaaagtgct
tcatttaaggacccaaacaaaacactgaaacaaaaagaaaacacttttccaccacagaac
ggtgggtttcaaaccgccagtggcaaaggagtttctttttcatctgcagccctaaagaaa
gcaaaaactctgttctgtgaaattgatgacgttgaggataaaatctttgtacaaccaagc
ccttctaaaatgctagtccctggtccaacactcaggaatagtggatttcttgcagccagt
gggaagcaagttgcattttcctctgaggccctgcagaaagcaaaagctctctttagtgac
atcagtttcaatgcagagaccccagctgttccagacacaaggaacaacgacaagacacaa
gacaatgctgaagttgcagagaaaatacattgtgggttctcaactgcaggcggcgcaaaa
gtccacgtgtcaaagcgaaatctattggaagcaaaaaaccttttgacagaatttgccgat
gttgaatgtcatgattcaaactcaacaagcccacgtggcatccgtaaatcagatctatca
aaagtgaaaagtgtgaaaatatcttgtaatccctccacagtcggtgacatggacatgttt
agtgcccctcaagtagttaaatcattatcctctttgcaagattatgacgctgaaaatgaa
tctcctcaacgtgcaagcgtatccggttgcatttttatcaaagaccaggcccacgcagaa
gcatttagggtaaatgaaggccaaattaccccagcagtgttggattataaaatacagcag
acaagcagcagacagggatccaaggtcaaaaggccacaggtgtcttcagctctgaacttc
cagtcacttaacctaagcggctgcactgaaacccagcagaagttgttcgcccaggaagct
ctggactgcaccaaggctttgttagaggacgaaggtctcgcgagccaaagtctctcaatg
actttagaaaatgccacccacggatctgtagtggagccacatgggacagggaaaagatcc
agagaggatccggatattattggtcagcctccgctgaaaagacgattactggaagaattc
gacagaactgttgatggtccaagaagttcaacactccatccggaaaaaagttctccaaat
ggtgtaatgaaagacagaaggattttcaagtacagcgtctctctccatccaaacatcacg
aggccacacaccaatggaaacggctatgtggaaacccgattacaaaatacaacaccaaca
cgacactcaaccccagaagaaagcagatcagcacactcggggaagccagcgtttgttcct
cctttcctcacgaacacaaagacggagagtcgtaggaatacaatgctcaaggacaacata
agaacaccttctgcttttgttcctcctttcaaaaaaccttttgtccaggagagctttgct
aaaccagaggtggagggaaaggaggataaacatcacaatctctttgtcacacccttcaac
agaaacacttatgtaccccccacacacaaaaaacaaagtgcttcagaaataactgctgat
aaaagcaaagacattgagacagtggccttggctcacaatataaatgataatctaatacat
aatgaaaacctcccggttggctgtggatcagaggactctgctgcagatacatcacatgtg
gaggatagattgtccagatgccaagacgtatttcagaatcttcagaatgtagagctggca
cgagatatgcaagacatgaggatcaggaaaaagaagcgccagaccattcgaccgttgccg
ggaagtttgtttctcaccaaaacctcaggagtgacaagaatatcattaaaggctgcagta
aatggaatgcctcctgcaaaatactctccaaaacagctgtacgggcacggagttcatcag
cacgtttgtgagatctccggtgagactgcagaatcgtttcgcttccatttgaagcagttc
atcaaacgggaagcttttccaggcggaggtggtgttcagcttgctgatggaggatggctg
atcccttccaaggatgggactgcggggaaagaggagttttatagagcattatgtgacacc
ccaggtgtggatcctaaactgatcagtgagggttgggtggacaatcactaccgatgggtt
gtatggaagcaggcatgcatggaaagatcatttccagaaacaatgggcggcctctgtctc
accccagagcaggttctcctgcagctgaagtacagatatgatgttgaggtggacaacagc
cgcaggccggctctgagaaagatcacggaaaaggacgactcggcagccaaaaccctcgtc
ctctgtgtctgcggggtcgtctccaggggtcactccccgagcagacggagcttcaatgac
accaagactccacaaggtgccgatgccaaggtagaaaatccatctgcggtcgtgtggctg
acagacggatggtatgccattaaagcccagctggatgaacctttgaccgccatgcttcac
agcggtcgagtggctgtcggtggcaaattgatcatccacggggctcagctggtgggagcg
caagaagcttgcccccctctggaggcacctaactctctcatgttaaagatttgcgctaat
agcaccagacccacacgatgggacacaaaactgggatttcacaaggatccacggccattc
ctccttcctctgtcctgtttgtacaggagtggaggtccagtaggatgcgtggacattatc
atactgagaagctaccccatacagtggatggagaggaaaccagatggagggattgtcttc
cgatctgttcgcgccgaagagaaggaggccagacgacacaacggccacaaacaaaaagct
atggagatcctattcgccaagattcaagacggatttgaaaaggaggacaaaggtaatgac
aaacctcaaagtagaagacggacgatcagtcgtcagggtatcgaaagtcttcaaactgga
gaggagctctatgaagcagtgggggaagacccagcctaccttgaggctcatctgagtgaa
cagcagatggagactctcagcacctacaggtgttctctgatggagaagaggcaggctgaa
ctgcaggatcgctaccgacgagctttagaaagcgcagaagacagtgaaggtagctgtccc
aagcgagacgttacacctgtgtggagactctgtgtggctgactccatggaccaacacggc
agcgtttaccagttgaacctttggcgacccacctcggatcttcagtccttactgaaggaa
ggctgtcgatacaaggtctataatctcactacttcggatggaaagaaacatggagggagc
acagctgttcagctgactgggtcaaagaaaacacaatttcagcacctacaggctcctcag
gaatggttatcaacacgttttcaaccgagggtctctgcccgttttgtggatcttcaaaac
ccagaattccagtcgctgtgtgcagaagttgatctcacaggatatgtcatcagtatcata
gacggacagggtttctctcctgcattgtatatggctgatgggagactcaactttgttaaa
gtgcgctgtttcagcagctttgctcaatctggcttggaggatttggtaaaattacgtgtc
cagttggctctgagcaacctgcagctgaggggtcagtccatatcacccactcctgttgtg
tacgctggagatctgaccatcttctcaacaaaccccaaggaaggtcatctccaagaatca
ctcagccgaaacaaaaacatggtccagagtcaagaaaacttctttctaattgctgaggag
aagttgtcacatttagtcagatctgatagcctgaggtccatctcctctccagctctgcaa
acacaaaccacagcgtgtaaaacggtcagaagacaagacacaaaaaccacagggactcct
cagcagctggtccgaagccttggatctttcacacccgtcagcaggaaacctcctggagca
aactgttcgacagagaaagaccctatcagcacgaagaggagaaaagctgtggactatctg
tctcgtatcccgtctccaccacccctgctccatctgggctcagaggcttccccatgtgta
aataagacattcaacccccctcggaggtcttggacaccaagcactttaaacaccgcacag
actccagctcgcaaacctgtcaattccccagtggaggatgaatgggtgaatgacgaggaa
ctggctatgatcgatactcagggattgcatgatggggatttactgcaggaacataagact
gtatga
DBGET
integrated database retrieval system
