Clinocottus analis (woolly sculpin): 137790520
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Entry
137790520 CDS
T10471
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137790520
Intermediate filaments
Intermediate filament-binding proteins
137790520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SLATT_6
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
137790520
NCBI-ProteinID:
XP_068440938
LinkDB
All DBs
Position
Unknown
AA seq
2703 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIRALADERDAVQKKTFT
KWVNSHLSRVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRSDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLENCVEAE
KIVNRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWEKLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMEAEAYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDIQVQLLSKDFGKHLLEVDDLLQKHGLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSTCLEELKQLAAKRRDELEESRQLWAFFQELEESEAWIREKSAILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALSFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVVALRKHMVVLPLQYREQEEVQMRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKNQLESMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYVGSDLGGVLALQRRLSTMEGALSVLEPKLMHLQEEAEHM
ATAHPGRAMEVLVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPATVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
LAQQWLDKLNDQWELQRFLQDCHELGDWVCEKMLMAKDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSAVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLHTMENQMEVWYKEVGQLQMQ
VASIPQQTQIKETVAGRQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMAMSHEHGSSLQAVQQLMKKNQTLQRELQGHRSRIDDVLERAGIIASIRSPEVNGI
RAGLDQLAQLWALLWAETERRQLILDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETVGLLSQQCRQLLEMGHPDCDQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTEF
ATETGSVGQDRVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACRENEVMQLWKELLTSCEECRVQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLQSEVEARTRSTLDCIEMGKTLLAAR
NPAAEEIKERLDKVVSKQYELSEKWDKHWDFLQQLLEVHQFAQEAVVAEAWLTAQEPLIS
SNELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPLDALPSASTLPRLPISPVMRQTIYEQNEANSPPSPSPATPTPSPSSVARRLGSTV
ASYTPVMNGSGYRHALEARHGAVVGVAAGLGQPAPSSIASVATAAMLVSANQAREIAGAT
REQATKAMSHLHPAQAARTLEAKSSPYLRQAKIRHLDDAVTPLLVASRLERAREREKERD
MMMGEIGTERPEVAVMAEVVLQEPCRERLHSEPTRGPRGSRTDPLGQAEPQVQTHGHHRI
ERQLSSEQLIQARRDELPQELWREQAERRDRRTLERQTSSEHEGHGGHGGHEGRRRERDR
HRLERQESSEHDTGKEHSDRRSGGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNGVPEK
PSRVDRPRARDRPKPRRRPRPKEAGETTRRSRSAPAQSSPAVPQPPAHTAHHEGFLFRKL
DIETLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTATPYNSEPLLNLSHCHCDVTNGYKK
KKNVFTLKTKDGSEFLFHAKDEEDLKVWVTNITASITEHEDIAKWGQPQPTTSSTDEGTR
RDGSKADNRSERGGEPSDRGERIEPAEKETEKEKEKEKGERSERSDRGGKSDSKRSEKSG
KKK
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaagcagctcaggattctgggagacggagtgcacgagctccaagctgttcgag
tgctcgcgcatcagggccctggcagatgagcgagatgcagtgcagaagaagactttcacc
aagtgggtcaactcccatctgtccagagtgtcctgtcgcatagcggacctctacaacgac
ctgagggatggatacatgctcaccagactgctggaggtcctcagtggagagctgctgccg
aggcctacacggggtcgaatgcggatccactgcctggagaacgtggacaaagccctgcag
ttcctcaaagaacagagggttcatttggaaaatgtgggttcccacgacattgtggatggc
aaccaccgcctcacgctgggcctcatgtggaccatcatcctgcgcttccagatccaggtg
atcaaaatagagacggaggacaacagagaaactcgctccgccaaggacgccctgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacaggtccgacctgatagag
ttccacaagctgacgcggtccaatgcaacccacaacctccagcaagccttcaacatcgct
gagcagcacctgggcctcaccaagctcctggaccccgaggatgtgaacacagagaaccca
gacgagaagtccatcatcacgtatgtggtctcctactaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtcctagaaaactgtgttgaggcggag
aagatcgtcaaccgctacgaggctctggcgtcggacctgctggactggatagaaaagacc
atagcggtcatcagcaaccagaagttcgccaactcgctgactggagttcagcagcagctg
caggccttcacaacctactgcaccatcgagaagcccatcaagttccaggagaaagggaat
cttgaggtccttctgttcaccatccaaagcaagctcagagccaacaaccagaaaccctac
gtgcctcatgaagggaagctcatctctgacatcaacaaggcctgggagaagcttgagaag
gcggagcatgagcgcggcgttgctctacgcaaggagctgattcgtcaggagaaactggag
ctgctggctcagtgctttgaccacaagaccaccatgagacaagcctggctcaatgagaac
cagaggctggtatcgcaggacaatttcggctacgacctgccggcggtcgaggcggcgatg
aagaaacacgaggccatcgaggcggacatcgcctcgtacgaagagcgaatcggcgtggtg
gtggaactggcggcggagatggaggcggaagcgtactacgacatccggcgtatcctggcg
cggaaggagaacatcctgggccagtggagtctgctgaaggagctggtggccgggaggagg
acccggctggagaagaacctggccctgcagaagacgttccaggacatggtctacatgatc
gactggatggaggacatacaggtgcagcttctgtccaaggactttgggaagcatctcctg
gaggtggacgacctgctgcagaaacacggcctgcaggaagccgacattgcagtgcaggcc
gagagggtcgagaccctcaacaccgctgcgctcaaattcaccactatagagggttaccaa
ccgtgcgacccacaggtgatctgtaaccgtgtcaaccacgtctctacctgcctggaggag
ctgaaacaactggcagcgaaacggcgggacgagcttgaggagtcgagacaactgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagggagaagagtgccatcctggga
gctcagggttatgggaaggacctgagcagtgtgctgaagttactacagaagcacaagacc
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaagcgagggaag
cagatcctgagcgagaagagcttcggcacggcgggcatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgtctgggccacctgcaggag
gcgctcagctttttccagttctccacggagacggacgacctggtggcttggctgcaggac
gcctaccgcctggtctccagcgaggactttggacacgacgagtactccacccagtccctc
ctgaagaagcacaggggggtcagcgaggccgttgacaaacatcgcatgcatgtcgtggcg
ctgcgcaagcacatggtggtgctgcctctgcagtaccgtgaacaggaggaggtgcagatg
cgcatgggagaggtggagcagctctacaccgaggtggctgaggtggcggtgctcagacag
cagtggctccacgacgccctcgccgtctaccgcatgttcagcgaggtcaacgcctgcgag
ctttggattgacgagaaggagcaatggctggacaaaatggagatccccgagagactggag
gacgtggagatggtggcacaccggtttgagagcttggaccaggagatgaacagcttgatg
ggaaggatcctggacgtgaaccagatagttcagcagctcctggatggaggtcatccgtcc
tctacagaagtcagaggttgtcaggatcacctcaactccaggtggaacagcattgtggag
ctggtggagcagaagaaaaatcagctggagtccatgctacgcctgcagaactacctgctg
gagtgcgccgagatcaagtcccagatccaggacaagagaaaagccattgacgccactcag
tacgtgggcagcgacctgggaggagtcctggctctgcagagacgcctctccaccatggag
ggagcgctgtccgtcctggagcccaaactgatgcatctccaggaggaggccgagcacatg
gccaccgcacatccgggtcgggccatggaggtgctcgtgccgttcgacggcatcagcgtg
gagtgggaggagctgaaacgcaccctgcagggctgcgaggactcgctgatggttgccagc
aggctgcagagcttcatacaggacctggactctttcctcacctggttggtccagacgcag
acggccgccgcctcagaccagcttcccaacgacctggaggaggcggagaagctcatcaac
aaacacgcggccctgaaggaggagatcggacggtacgaggaggattacgagcgcctgcag
gccatgaacgagctgctggagtccgaggaggctcccctccctcaggccgccctgcagcag
tggctccagaagctcgacgtcggctggaacaaactcctggagatgtgggagagccggagg
gaggttctggtccaggctcacatcttccacctcttcctgcgagatgtcaaacaggccgaa
tccttcctcaacaaccaggagtcggctctggctcacgtggagctgcccgccacggtggaa
acggtggaggccgccatcaagaaacacaaggacttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggctggagagagtctgatcagccagagcaacatctac
tccgaccgcatcaaggaacgcatcgacaccctcgctaacaggggaaaccagaaccgagag
ctggcccagcagtggctggataaactgaacgaccagtgggaacttcagaggtttcttcag
gactgtcacgagctgggggactgggtgtgtgagaagatgctgatggcgaaggacagcagc
cgagacgagacccagaagcttcacaagaaatggctgaagcaccaagccttcatggccgag
ttggcccagaacaaggagtggctggacaagattgaaaaggagggccagcagctgatccag
gagaagccggagctcagcgcggtggtccggaggaagctggaggagatcagggagtgctgg
caggatctggagagcaccacccaggccaaagcccgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagaggctgggccagctggagggccag
ctcgcctatgtggaccagggacaggacctcaccactgtcaacaagcagctgaagaagcta
cataccatggagaatcagatggaggtgtggtataaggaggtggggcagctccagatgcag
gtggcctccatcccgcagcagacgcagatcaaggagacggttgccggccgccaagccgtt
gtggaggccaggatggtccgtctgatcgagccgctgaaggagaggcggcgcatcctgctg
gcatcgaaggaagttcaccaagtcggacgagacctggaggacgagattttatggatccag
gagcgcctcccaatggccatgtctcatgagcacggctcctctctgcaggccgtccagcag
ctcatgaagaagaaccagaccctccagagggagctgcagggccacaggagccggatcgac
gatgtcctggagagggccgggatcatcgcctccatacgcagcccggaggtcaatggcatc
agagcgggcctcgaccagctggcccagctgtgggctctgctctgggccgagactgagcgc
aggcagctgatcctggacgccatgtaccaggcccagcagtactacttcgacacggccgag
gtggaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaaggggaaggac
gagccgagcacactgcagctgctgaagaaacacctggtcctggaacaaaccatcgaggac
tacgccgagaccgtcggcctgctgtcacagcagtgtcgacagctgctggagatgggtcat
ccggactgcgaccagatcagcaagcgtcagtcgcagatcgaccgcctgtacgtgtccctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctc
aacagggaggtggacgagctggagcagtggatcgctcagagagaggtggtggccagctcg
ccggaactgggtcaagactacgagcatgtcaccgtgctgcaggagaagttcacggagttc
gcgacagagacgggcagcgtggggcaggaccgggtgacggccgtcaaccagatggtggac
gagctcatcgactacggccactcggaggccgccaccatcgccgagtggaaggacggggta
aacgaggcctgggccgacctgctggagctcatggagacccgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctccgactgcagagaggtgttggcccagatcgaggac
aagcaccgacggctgccagaagttcgggctcggcagggcagcaccgccaacaccagcacc
ctgcagagactcctgcacagcttcgagcaggacattcagctgctggtcacacaggtgcgt
cagctgcaggagagcgcggcccagctgaggacggtgtacgccggcgagaaggccgaagcc
atcgcgtgccgcgagaacgaagtgatgcagttgtggaaagagctgctgacgtcctgcgag
gagtgtcgagtgcagatcaccaccgagacggacaagctgaggttcttcagcatggtccga
gatcagatcatgtggatggaatccatcatctgtcagatcgggacaggagagaagcccagg
gacgtgtcctcagtggaggtgctgatgaactaccaccagagtctgcagagcgaagtggag
gcgcgcacccgcagcaccctggactgtatcgagatgggcaaaactctgctggctgcaaga
aacccagcagctgaagagatcaaggagaggttggacaaggtggtttccaagcaatatgag
ctgtctgaaaagtgggacaagcactgggacttcctacagcaattgttggaggttcaccag
tttgcgcaggaggccgtggtggcggaggcgtggctgacggctcaggagccgctcatcagc
agcaacgagctgggcgccagcgtcgacgaggtggagcagctgattcgccgacacgaagcc
ttccgcaaagccgccgccacctgggaggagcgattcagctcactgcggcggctcaccacg
gtggaaaagttgaaagccgagcaaagcaaactaccgccgacccctctgctgggtcgtaaa
gtcttcctggaccccctggatgccttacccagcgcgtccaccctgccccgcctcccgatc
tcccccgtcatgagacagacaatctacgagcagaacgaagccaactctcctccctcgccc
tcgcccgccacgcccacgccctccccctcgtccgtggctcgtcggctggggtcgacggtg
gccagctacaccccggtgatgaacggctccggctaccgccacgcgctggaggcgcggcac
ggcgccgtcgtgggcgtggccgcggggctgggccagcccgctccctcctccatcgcctcg
gttgccacggcggccatgctggtttcggccaaccaggcacgagaaatcgccggcgccacg
agagagcaagcgaccaaggccatgagtcacctccatccggcacaggcggcgaggacgctg
gaggccaaatcgtccccgtatctgcggcaggccaaaatcagacacctggacgacgcggtg
acgccgctgctggtggccagccggctggagagggcgagggagagggagaaggagagagac
atgatgatgggagagataggaacggagaggccggaggtggccgtgatggccgaggtggtg
ctccaggagccctgcagggagcgcctgcacagcgagcccaccagggggccgcgggggtcc
aggaccgacccgctgggccaggccgagccccaggtccagacccacggccaccaccggata
gagcggcagctgtccagcgagcagctgatccaggcacgcagggacgagctgcctcaggag
ctgtggagggaacaggccgagaggcgggacaggcggacgctggagaggcaaacgtccagc
gagcacgagggccacgggggccacgggggccacgagggccggcggagggagagggaccga
caccggctggagagacaggaatccagtgagcatgacaccgggaaagagcactcagacaga
cgctcaggaggaggagaaaagagatccaccatggcagaaatagtagagcagctgcaagaa
agggaagcagcacaggcccgtggcgaggtgccccgcctgcccaacggcgtaccggagaag
ccttcccgtgtcgaccgaccccgggcgcgggacaggcccaaaccgcgccgccggccgcga
cccaaagaggcgggagagactacgcggcggtccaggtccgccccggcccagagcagccca
gcggtgccgcagccgccggcacacaccgcacaccacgagggcttcctgttccgcaagctg
gacatcgagaccctgaagaagagcaccaatagcaggtcatgggtcaacctttactgcgtg
ctcaacaaaggggagatgggcttctacaaggacgccaagaacaccgccacgccctacaac
agcgagccgctgctcaacctctcgcactgccactgcgacgtcaccaacggctacaagaag
aagaagaacgtcttcacgctcaaaacgaaggacggcagtgagttcttgttccacgcaaaa
gatgaggaggacctgaaggtgtgggtgaccaacatcaccgccagcatcacagagcacgag
gacatcgccaaatggggtcagccccaaccaactacctcatccaccgacgagggcacgcgg
cgcgacggcagcaaggcggacaacaggtcggagcggggcggcgagccctcggaccgcggc
gagcggatcgagccggcggagaaggagacggagaaggagaaggagaaggagaagggcgag
cggtcggagaggtcggaccggggagggaagtcggactcgaagcgctcagagaagtccggt
aagaaaaagtga
DBGET
integrated database retrieval system
