Clinocottus analis (woolly sculpin): 137790532
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Entry
137790532 CDS
T10471
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04137
Mitophagy - animal
cana04140
Autophagy - animal
cana04148
Efferocytosis
Brite
Transcription factors [BR:
cana03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137790532 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137790532
NCBI-ProteinID:
XP_068440961
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Position
Unknown
AA seq
677 aa
AA seq
DB search
MEEKEEAVVVKRSSSEQRKLRSRDAARCRRSHETEVFYDLAGTLPLPRRVSAHLDKSAIM
RVALSFLRMQQLLRPGENQREKSEEQVEKEDEKVEKKKEEEEEQEEEEEDDPMDSFYPQA
LAGFIMVMTEEGDMIYLTENVSTHIGVPQLELLGQSIYDFVHPCDQEELRDLLIPRPGSR
RKPPAERPSERNFFLRMKSTLTSRGRTVNIKSATWKVLHCTGHVRQVGGGSAAPPVGGAM
TLLCEPIPHPSSVEFPLDTRTFLTRHSMDLHFTHCEGRVAELVGYKPEDLIGRSAYEFHH
AIDSDHVKKSMLTLLSKGQVSTRHYRFLANGGGFVWAETQATVLFSSKTSQPEAVVCLNY
ILSAVEQPDLVFSVEQTRGGRAPAAPPPPDRGTCDISDSDPDSELLAGSGQTEDAGLNPG
SAAELFFKLKELPEELLEAAPEAGDAIDPLTGDGLQLSSSTLPGPEELCSPQLRQLLCPI
FSPLTPPLSSSSSSPASPHDVESSPREEEATDTSEVERFFAVWPGEKKEEAVEMEVMDLD
MLAPYISMDDDFQLTVLSSLPDEADKPPSSLSEPSAEASAGSRKRAHNPYEELLIQDKRQ
KQEPSSIEEELLLSDTLLSCLEENDQSDVFMDLGAAARSQLLTDRDPVLGGSLCDDSAAL
MRDMFTPRPQDMSAAMT
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggaggaggccgtggtggtcaaacgctccagctcggagcagaggaagctg
cgttcccgggacgcggctcgctgtaggcggagtcacgagacggaggtgttctacgatctg
gccggcacgctgccgctcccccggcgagtctccgcccacctggacaagtcggccatcatg
agggtggcgctcagcttcctgcggatgcagcagctgctccgacccggtgagaatcagaga
gagaagtctgaagaacaggtggagaaggaggacgagaaggtggagaagaagaaggaagag
gaggaagagcaggaggaagaggaggaggacgatccaatggattctttctatcctcaggcg
ctggccggcttcatcatggtgatgaccgaggagggcgacatgatctacctgacggaaaac
gtcagcacccacatcggcgtcccacagctggagctgctgggccagagtatctatgacttc
gttcacccgtgtgatcaggaggagctcagagacctgctgattccacgtccaggttcacgc
aggaagccgccggcagaacggccgagcgagaggaacttcttcctgcggatgaagagtact
ctgaccagcagggggcgcaccgtcaacatcaagtctgctacctggaaggttctccactgc
acaggtcacgtccgtcaggtgggcggcggctccgcggcgcctcctgtgggcggagcgatg
actctgctgtgtgagcccatccctcacccgtccagcgtggagttccctctggacacgcgc
accttcctcacccgccacagcatggacctgcacttcacacactgcgagggcagggtggcg
gagttggtgggatataaacctgaagatctgattggccgctcagcctacgagtttcaccac
gccatcgactccgatcacgtcaagaagagcatgctcacactgctgtccaaaggtcaggtg
agcaccagacactaccgcttcctggcgaacggcggcggcttcgtgtgggcggagactcag
gccaccgtgctcttcagcagcaagacgtcgcagccggaggccgtcgtctgcctcaactat
attctcagcgccgtggagcagccggacctcgtcttctccgtggagcagacgcgcggcggc
cgggcgcctgcagcgccgccgccgccggatcgtgggacttgtgacatcagcgactctgac
ccggacagcgagctcctcgccggctccggtcagaccgaagacgcaggtttgaatcccggc
agtgcggcagagctcttcttcaagctgaaggagttgccggaggagcttctggaggcggct
cccgaggcaggagacgccatcgacccgctgacgggagatgggttgcagctgtcgtcctcc
accctccccggtccagaggagttgtgcagtccacagctgcgacagctcctctgccccatc
ttcagccccctcactccacctttatcatcatcatcgtcatcgccggcctccccgcatgat
gttgagtcgagcccccgtgaggaggaggcgacggacaccagcgaggtggagaggttcttc
gctgtttggcccggggagaagaaagaggaagctgtggagatggaggtgatggacctggac
atgctggctccgtacatctccatggacgacgacttccagctgacggtgctcagcagtctg
ccggacgaagccgacaaacctccgtcctctctctccgagccctcggctgaggcctcggca
ggaagcaggaagcgggctcacaacccgtacgaggagctgctgattcaggacaagagacag
aaacaagagccgtcctcaatagaagaggagcttcttctcagcgacacactgctgagctgt
ctggaggaaaacgaccaatcagatgtgttcatggaccttggtgctgcagcgagaagtcag
ctgctcacagacagagaccccgtgttaggaggctcactctgtgacgacagcgccgctctg
atgagggacatgttcacacctcgtccacaggacatgtcggcggccatgacttga
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