Clinocottus analis (woolly sculpin): 137790541 Help Entry 137790541         CDS       T10471                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04382   Cornified envelope formation cana04510   Focal adhesion cana04512   ECM-receptor interaction cana04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cana00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     137790541 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     137790541 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     137790541 (col4a4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     137790541 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cana04147]     137790541 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137790541 (col4a4) Exosome [BR:cana04147]  Exosomal proteins   Exosomal proteins of other cancer cells    137790541 (col4a4) Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137790541 (col4a4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  137790541 NCBI-ProteinID:  XP_068440980 LinkDB All DBs Position Unknown AA seq 1668 aa AA seqDB search MLLTSCSALRSSTRLWCVLMILSAPPAVLGGELTEPCGGRDCSTCQCLPAKGARGSPGPL GRQGPQGPPGFPGPLGPPGQKGQRGGEGPPGAAGLKGTSGSVGVPGFPGLEGIPGHPGPA GGPGFPGLDGCNGTRGGGGAPGPPGAPGADGEPGFDGLKGFPGDPAVYFIQYPGVPGDVG SGGLPGRQGELGLPGPLGVLGPPGLDGTNGLPGLPGSRGAPGEKGRSLPGQKGDEGDQGL QGPPGPFEYVDPPEDLYLKGEQGTQGPKGVCGRPGLPGLDALPGTKGEKGIVGFPGPRGF SGLSGLPGNRGLKGIPGSPGLPGLIGREGPKGMLGDLGPKGLPQNVVVTHSGDVGDPGAP GPRGPPGDLGLMGMHGPPGGPGRSVPGPAGAEGLKGSAGSRGDKGDPGQVYRDRPTPGEP GKPGYPGPRGLKGEQGRPGSYCLPGAQGESGPPGDRGPPAVQGLLGFKGSPGDCFCGPPV VLRGPLGLVGDLGSPGFPGSPGAPGLRGVEGLPGDTGERGRQGLGGFPGVKGFKGQKGDF TMVDFKGEKGNIGQQGPPGRQGLSGRKGLNGPPGAPGSPGPEGESFASSPGERGFPGYPG QKGSSGPSGLTGRGVVGAVGQRGDPGSPGPEGLLGPSGPKGVKGDTLPCVPRNPGHPGEK GDIGDAGYRGLPGPPGFRGVTGPDGPKGDNGRPGLLGPPGRQGPPGSVGDTGKEGSEGFS YGGDPGSPGLPGSFGLRGPAGESDVGPSGPIGFPGRLGSQGPKGVPGLPGVSGLKGLPGL AGGPGVEGQRGQDGAPGRTGPQGPKSDFCDAGKPGASGLFGPQGPIGPPGFSGEKGEIGQ EGTPGYGPQGPQGKPGSPGFSGYPGPQGPSGPGGDSGLPGLCGQTGPMGPQGQAGGPGAP GRTGALGPLGRQGERGSNGRDGGPGCEGRKGEKGCKGAPGPPGETKGVPIKGDRGKDGPP GTNGFPGPRGNKGFQGPPGKLGCQGVNGPVGAIGLLGPPGPDGPPGPSGSPGGPGPTGFI GFPGETGDPGDPGCPGKDGEPGHQGCTGSKGDKGDSVSCSGPPGDEGPFGDLGPQGPPGP QGIPGRPGFLGVPGQRGCKGDPGHQGELGPPGVVGPSGPRGRSGLPGLPGEAGADGPPGP LGFLGLPGPPGPLGLHGLDGLKGVKGDMGTRGLGQSGAPGCLGLPGDKGPPGPPGPMGSS QNGPPGPTGPPGAKGPPGDSGPPGEPGPDCKAPIPGPAGDPGPTGPDGEPGCAGEMGDPG QNPPVPGDDGDNGDTGCQGPGGLQGPQGPDGLPGIPGNTGVKGLRGSSGLMGLPGNRGSR GCTGPDGPPGPKGSTGPVGPKGEVGRVSSCPTYPPAMPGPPGPPGPDGLDGDVGVQGETG RTGPKGRKGEIGCEGPIGPEGPSGPDGGRGEPGRPGKRGVVGAKGDPGPIGDRGPRGPNK NLNSGFLLVLHSQSKAVPSCPRDMRVLWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTM PFSSCNMGKCSYASRNDKSYWLSTTAAVPSVPVGGASIEEHISRCAVCEAPSSPVALHSQ TAGQPACPPRWRSLWTGYSFLMHTGAGDEGGGQSLTSSGSCLTDFRAQPFVECQGPRGTC HYFANIYSFWLTRVETTASELDHGTSTTLTEGRQQRESIGRCSVCMRE NT seq 5007 nt NT seq  +upstreamnt  +downstreamnt atgctgctgacttcctgctccgccctccgcagctccacccggctctggtgcgtcctgatg atcctgtcggctcctccagcagttctcgggggcgagctcaccgagccgtgcggcggcagg gactgctccacctgccagtgtttaccagccaaaggagcaagggggtctccaggccctctg ggccggcagggccctcaggggcccccgggcttcccgggccctctggggcctccagggcag aagggccagagaggaggcgaaggcccgccaggagcagccggactgaaaggaacctcgggg agcgtcggcgttcctggttttccgggtttagaaggaatcccgggtcacccgggtccagct ggaggtccggggttcccgggtctggacggatgcaacggaaccagaggagggggaggggcc ccggggccgcccggagcgccaggagccgacggggaaccgggttttgatggactgaagggg tttccaggagatccagccgtgtacttcatacagtaccctggagtacctggagacgtgggc tctggtggacttcctggtcggcagggtgaactgggtctgcccggtccgctgggggttctg ggtcctccaggactcgacgggaccaacggtctccctggtctgcccggctccaggggcgcg cctggagaaaaaggtcgatctctgccgggacagaaaggagacgagggggatcagggcctc caggggccgccggggccctttgagtacgtggaccctccagaagacctgtacctgaaagga gagcagggcactcaggggcctaaaggagtctgtggaaggccaggtctgccgggtctggac gctctccccgggaccaaaggagagaaaggcattgtggggtttcctggtcccagaggattc tctggtctctctggtctgcccggcaacagaggactcaaggggattccaggaagtccaggt ctcccaggtctgattggacgagagggtccgaagggcatgctgggagatctgggtcccaaa ggcctcccccagaacgtggtcgtcacacactcaggtgacgttggagaccccggggccccc ggacccaggggccctccaggagacctggggctcatggggatgcacggcccccccggaggt cccggccgatccgtaccgggtccggcaggtgctgagggtctgaagggaagtgcagggtcc agaggggacaaaggagatccaggtcaggtgtacagagacagacccacacctggagaacct gggaaaccaggatatcctggacccagaggactgaaaggagagcaggggagaccaggtagt tactgtcttcccggggctcaaggagagtctgggcctccaggtgatcgggggcccccggcg gtccaaggcttgctcgggttcaaaggtagtcctggcgactgtttttgcggccccccagtc gtactgaggggccccctcggccttgtgggagacctggggtctccagggtttccaggatct ccaggggccccgggtctgagaggagtggaaggtttacccggagacacaggagagcgcgga cgtcagggcctgggaggatttccaggtgtcaaagggttcaaaggtcagaagggagatttc accatggtggattttaaaggtgagaaaggaaacattggccagcaaggccctccaggcagg caaggactctcagggagaaaaggactcaatgggcccccgggcgctcctggaagccccggc ccagagggtgaaagtttcgccagttctcctggagaaagaggcttccctggatacccgggg caaaagggctcatcagggccttcaggcctgacggggcgaggtgtcgtcggagcagtagga caacgtggggaccctgggagcccgggacctgaaggactcctgggcccctcgggaccgaag ggggtcaaaggcgacactctgccctgtgtgcccagaaaccccggccaccctggtgagaaa ggagacattggagatgcaggttacagaggactgccgggtccgcctggtttccgtggcgtc actggacctgatggacctaaaggggacaatggtcggcctggactgcttggaccacctgga cgacaaggacctccaggttctgttggtgataccggaaaagaaggatctgaaggcttcagt tatggtggcgatccaggttctccggggctcccaggctcttttggactcaggggcccagca ggtgagtctgatgttgggccctcgggacccattggcttcccgggacgtctgggctcccag ggacctaaaggagtccccggcctccctggcgtcagtggactaaaaggactcccgggtctg gcagggggccccggagttgagggccagagaggacaagatggggcccctggtagaactggc ccccaggggcccaaatctgacttctgtgacgcagggaaacctggtgccagtggccttttc ggccctcaaggacccatagggccaccaggtttttctggggagaaaggtgagatcgggcag gagggtactccaggttatggccctcaaggccctcaaggaaaaccaggctctccaggtttc tcaggatacccggggccccagggcccctctgggcccggtggagactctggactgcccggg ctctgcggtcagacaggtccgatggggccgcagggccaggccggagggccgggggcccct ggacggaccggggccctcggacccctggggaggcagggggagagaggatccaacggacga gacggaggtccaggatgtgaaggtcggaaaggagagaaaggctgtaaaggggccccgggg cctccaggagagaccaagggcgtccccatcaaaggagacagagggaaagatggaccccct ggaaccaacggctttcctggaccacgaggaaataaaggtttccaaggtcctcctggtaag ctggggtgtcagggcgtcaacggacccgtaggcgccataggacttctgggaccacctggg cccgacggaccaccggggccttcaggatcacctggaggccccggaccaaccggattcatc ggcttcccaggggagaccggagatccgggtgatccgggctgtccaggaaaggatggagaa cccggccaccaaggatgtactggatccaaaggtgataaaggagactccgttagttgttct ggtcctcctggagacgaggggccttttggagacttggggccccaaggaccgcctggacct caaggaattcctggaagacccggtttcctcggggttccaggacaaagaggatgcaaagga gatccaggccatcagggggaactgggtccaccaggtgtggtcggtccctcgggtcccaga ggccggtccggtcttccaggtcttcctggtgaagcaggtgctgatgggcctccaggacct ctcggcttcctgggacttccaggtcctcctggaccgctcggccttcacggactggacgga ctgaagggagtgaagggcgacatggggaccagaggtctggggcaatcgggtgctcctggt tgtcttggtcttccaggcgataaaggtcctccgggtcccccgggaccgatgggttcatcc cagaacggccctccggggcccacgggacccccaggggccaaaggaccgccaggggattcg ggacctccaggtgaacccggaccagactgcaaagctccgatcccaggacctgctggagat cctggtcctactggaccagatggagagccagggtgtgctggtgagatgggggatccgggt cagaaccctccagtacctggggacgatggggacaacggggacacaggttgccaggggcca gggggcctacaaggacctcaggggcccgatggactgccagggatcccaggaaatacggga gtgaaaggtctgcgggggtcttctggtctgatgggactgcctggtaatcggggttctaga ggctgcaccggtcccgatggaccaccaggaccaaagggatccactggaccggtgggtcca aagggcgaggtgggacgagtctcatcttgtcctacttaccctcccgcgatgccgggtccc ccaggaccccccggccccgacggtctggatggagatgtcggcgtccagggagaaaccggc cggacaggacccaaaggtaggaagggggagatcgggtgcgagggaccaataggccccgag gggccctcgggtccagatggaggccgaggagagccaggccggccggggaagcgcggcgtc gtgggagccaaaggtgatcctggaccaatcggtgaccgcggccctcgtggaccaaacaaa aacttgaactctggcttcttgttggtgttgcacagccaatcgaaggctgttccctcctgt ccacgcgacatgagggtcctctgggtcggatacagtctgctgtacctggagggccaggag aaggcccacactcaggacctgggtcaggccgggtcctgcatgcgggtcttctccacgatg ccgttctcctcctgcaacatgggaaaatgctcctacgccagccggaacgacaaatcctat tggctgtcgacgacggccgccgtccccagcgtcccggtgggcggggcctccatcgaggaa cacatcagccgctgcgccgtgtgcgaggcgccgtcctccccggtggctctgcacagccag acggccggccagccggcgtgccccccccgctggaggagcctgtggacggggtactccttc ctcatgcacacgggagccggcgacgagggcggcggccagtctctgacgtcgtcgggcagc tgcctgacggacttcagggcccagcccttcgtggagtgccaggggccccgaggaacctgc cactacttcgccaacatctacagcttctggctgacgcgggtggagacgacggcctccgag ctcgaccacggcacctccaccacgctgaccgagggccggcagcagagggagagcatcggg aggtgcagcgtctgcatgagggagtga

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