Clinocottus analis (woolly sculpin): 137790883
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Entry
137790883 CDS
T10471
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04110
Cell cycle
Brite
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
137790883 (atrx)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
137790883 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137790883
NCBI-ProteinID:
XP_068441560
LinkDB
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Position
Unknown
AA seq
2178 aa
AA seq
DB search
MSLASSDLHQDLMSEKADEPGSSTETMKPSSRNKRKPTTVSKHTGLKESDASAESENEGA
TSDNPSDNNTSSVSKGTLVIRPAGNDNKGAMKLRVDFKPKHTDDTLQKKVNCTACGKQVV
NQFVRNSVYEHPALKVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQVLVSKCHSIMEKQELKDRKPEKSE
ERETKRHKNKAVKEHKTIVNGKEHTEGSGTMTFSYKKLQVPKELIKKAKKLVETTTGLNN
TFIQFIQQAAEEQGDKSIRYRHLKAFRAVLADLKKAHSALEVALGPEFKNVELQNGNEGQ
HIVKKSTYVVSPLENDMDNMTDSVEKADDLAEDEADDDQAEEDEAADDDQAEEDEAEDDL
AEEKVDDLAAVEKDGGLEEADDDLEEEEVEADDLPEVKADDLVDEADDDLEEEEEADDDL
PEEEADDDDDLEEEGAVDDLTAVEEAADNVAVKKTNVPVEQVHGIVAKDADNLEAKEDKK
TGHAPVEEAVGEASHAAVEEADMGQRNDQKVSDTRRKDNQTATDVTKKTIKTEACDDGLG
SAGEMSLDQDIMSVPPSVPEELFQMVESLADSTMLSQSDTDLVTDAVKRSSGNSKHSQPP
QPKVKNLIVKLTPVPVVTTRGSRSSSSKNKEKPGEMQKKCVEDHGKEKDDASKAEVDGKA
SPPPSRRSSRLKTTPLRKQAEKKGKEESSESDEDRKRKVNSSKNPSKNDKGTAKETKDPE
KKSMDSDSDEIPNILLEKAAAGRSTDEEQESTSAKKCLFKLKNTSTQDTDKASKRKRKSE
SSDSDLGIKSKKTSKKKKQTGSDSTNSDSDQEKESKSKAATVKRRSSRVKKQDEAKEEEK
SSPERKAAKRRRSYEVKRKGRSPKAASKLQLSSSEEEEEEQAEGDSGEDSDEQKLKPIVE
DNVVGGSGPFHQSSGDEEDDKVRDPQVCDDDDDDDPENRIAKKMLLAQIKSNYSSGAESS
SDNEGADKDDKSSRKVKKEDDDDEDDDDEAQQDEDSEDSEVEVKKRAGRHKLLRHKLSLS
EGEGDSGEEKAASKEKKAGKKKSGKKVHSTDSSDSDSDFEKSESSEASGISEELSESENE
GKRRKTRSSKKKDEAKQRSYKQQKKKRRRIKVQDSSSSNEKSGKEGDDDDDDQKGRKKIR
KILKDDKLRTETRDALKEEEDRRKRIAEREELREKLREVILVDESAHVPCPCPITTKLVL
DEQEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSPGSGCILAHCMGLG
KTLQVVTLLHTLLLCEKLDFTTALVVCPLNTVLNWLNEFEKWQVGLKDDESLEVIELATV
KRPQERAYALQRWQESGGVMIIGYEMYRNLTQGKNTKSKKLKEIFQKTLVDPGPDIVICD
EGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLVEYHCMVNFIKENLLGSVKEFRNR
FINPIQNGQCADSTLQDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLSVRV
TPIQCKLYRYYLEHFTGVGNAMEGGRGRAGTKLFQDFQVLSRIWTHPWCLQLDYISKENR
GFFDEDSMDEFIASETEESSMSMTSEDEKAKKKKKGKGKKRGSDDSDSDEVEVIKEWNTC
TRGKNGESRSRPELVEEPRTISSTPGSPTHDWHKEFVVDADSEILEHSGKMMLLFEILRM
AEEVDEKVLVFSQSLISLDLIEDFLELACRAKDDEKVSPYKGEGKWFRNIDYYRLDGSTN
ALTRKKWAEEFNDTSNIRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRV
YRFGQTRTVYVYRFLAQGTMEAKIYDRQVTKQSLAFRVVDQQQIERHFTGVELAELYTFE
PEMLDDPSAKKSKKATPVLPKDPFLAEMLKNNKDQIVCYHEHDSLLDHKEEEALSEEDRK
AAWTEYEAEKKGVFVRNNQSAYNQMDMGNSNYFSFNMAALASMTNQQLEDLINQGRQKVI
DATNSLKTVARESLEDAIARLWKENPALTETQVQSMALGQQANLELEIKRREAVYRDVLT
RQQTLMMYVQKLITNRKVQEQQMAMANQASYLNQLAMQNGMMGGGGLSQMDLVGLYQQLH
GLGSHPGMGKNPGPSKGL
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggcttcttctgatttgcaccaagacctaatgtcagaaaaggcagacgagcct
ggaagctcaacagaaactatgaagccctcttctcgtaacaagaggaagcctactactgta
tctaagcacactggactaaaagaatctgatgcctcagctgagagtgaaaatgaaggtgcc
acttctgacaatccttcagacaataatacaagcagtgtatcaaaaggcactttagtcata
aggccagctgggaatgataataaaggtgccatgaagctcagagtagatttcaaaccgaaa
catacagatgataccctgcagaagaaggtaaactgcactgcctgtggtaaacaagtagta
aaccagtttgttcgcaactctgtatacgaacatcctgcactcaaagtactcatttgcaag
tcatgttacaagtattacacaagtgatgacatcaaccgggactctgatgggatggatgag
cagtgcaggtggtgtgctgaaggtggcaaactcatctgctgtgactactgcaacaatgcc
ttctgcaagaagtgcatcctgcgcaatttggggaggaaggagctgtctgtcattactgat
gagaattcaaaatggcactgctatgtctgcaggtcagagccactccaggttctggtctcc
aaatgccacagcatcatggaaaaacaagaactcaaggaccgaaaaccagaaaaaagcgaa
gaacgtgagaccaagaggcacaagaacaaagcagttaaagagcacaaaaccattgtaaat
gggaaagaacacaccgaaggctcagggaccatgacattctcctacaaaaaactgcaggtg
cccaaagaacttataaagaaagcaaaaaagcttgttgaaactacaactggtctgaacaat
acattcatccagttcatccaacaggcagctgaggagcaaggagataagtctatcaggtat
cggcatttgaaagctttcagggctgtgcttgctgatttgaaaaaagcccacagtgctttg
gaggtggctttggggcctgaattcaaaaacgtggagttacagaatggtaatgaagggcaa
catattgtgaaaaagagcacttatgttgtgtcccctctagaaaacgacatggataatatg
actgattcagtggagaaggctgacgacctagcggaggatgaggcggatgacgatcaagca
gaggaggatgaggcggcggatgacgaccaagcagaggaggatgaggccgaagacgactta
gcagaggagaaggttgacgacctagctgcagtggagaaggatggcggcctggaggaggcg
gatgacgacctggaggaggaggaggtggaggcggacgacctaccggaggtgaaggcggac
gacctagtggacgaggccgatgatgacctggaggaggaggaggaggcggacgatgatcta
ccagaggaggaggctgacgacgatgatgacttggaggaagagggggccgttgatgacctc
acggcggtagaggaggcagctgacaacgtagcagttaagaaaaccaatgttccggtggag
caggttcatggcatagtggcaaaggacgctgataacctagaagcaaaggaagataagaag
actggtcatgcaccagtagaggaggctgtgggggaggctagccatgcagcagtggaggag
gcagacatggggcagcgtaatgaccagaaagtgtctgacactagaaggaaagacaaccaa
acagcaactgatgtaaccaaaaagacaattaaaactgaagcatgtgatgatgggttaggt
tcagctggtgaaatgtctctcgatcaggatattatgtctgtgcccccttcggttcccgaa
gagctttttcagatggtggagagtcttgcagattccaccatgctctcacagtctgacact
gatttggtcacagatgctgttaaaaggtcaagtggaaactcaaaacactctcaacctccc
cagcccaaggtgaagaacctcatagttaaactgactccagtgccagttgtgacgacacgc
gggtcaaggtcctcctcgtccaaaaataaggaaaaacctggagagatgcaaaaaaagtgt
gtagaagatcatgggaaggagaaagacgatgcttctaaagcagaggtagatggaaaggcc
agcccaccacccagccgtcgctcaagtagattgaagaccacacccctgagaaagcaggct
gagaagaagggtaaggaagaatcctcagagtcagatgaagatcgtaagcgcaaggtaaac
tcctccaaaaatcccagtaaaaacgacaaagggaccgcaaaggagacaaaggatccagaa
aagaagtcaatggattctgactcggatgaaattcctaacatattgctggagaaagcggca
gcaggccgcagcacagatgaggaacaagaaagtacaagtgctaaaaagtgtttattcaaa
ctaaaaaacacatccacacaggatacagacaaagcgtcaaaacgcaaaaggaagtctgaa
agctctgactctgacttggggatcaaaagtaaaaagacgtcaaagaagaagaaacagact
ggctcagactcaaccaactctgactcggaccaggagaaggagtctaagagtaaagcagcc
acagtaaagaggagatctagccgtgtaaagaagcaagatgaagccaaagaagaagaaaaa
agctcacctgagaggaaggcagccaagaggagaaggtcttatgaagttaagcgcaagggc
agaagccccaaagcggcctccaagctgcagttatcctccagtgaggaggaagaggaggag
caggctgaaggcgattccggagaggacagtgacgagcaaaaacttaagccaattgtggag
gataacgtggttggaggaagcggaccgttccatcagtcctcaggggacgaagaggatgat
aaagtgagagaccctcaggtttgtgacgatgatgacgacgatgatcctgaaaacagaatt
gcaaagaaaatgcttctcgcccaaataaagtcaaactattcttctggagcagagagctcc
tctgataatgaaggagcagataaggatgacaagtcctcaaggaaagttaaaaaggaggat
gatgatgatgaagatgacgatgatgaagcgcaacaagatgaggattcagaagactctgaa
gtggaagtgaagaagcgtgcaggacgccataaattacttcgtcataaactctcgctgagt
gagggtgagggtgactcgggagaggagaaagctgccagtaaagagaagaaggcgggcaag
aagaagtcagggaaaaaagttcacagcactgactcttcagactccgactccgactttgag
aagtcagagtccagtgaagcatcagggataagcgaggagcttagtgaatcagagaacgaa
ggaaaacgtcgaaagaccagatcttctaagaagaaggatgaagcaaaacagaggagttac
aagcagcagaagaagaagcgacgcaggatcaaagttcaggattcctcttccagtaatgaa
aagagtggaaaggaaggtgacgatgatgatgatgaccagaaaggacgcaaaaagatccgc
aaaatcctgaaggacgacaagctgcggacagagacgagagatgcactgaaagaagaggag
gataggaggaaacgtatagctgagagagaggaactcagggagaaacttcgagaggtgatt
ttggtggacgaatctgcccatgtgccctgtccctgtcccatcacaaccaaattggtgctt
gatgagcaggaagagaccaaggagccgctggtgcaggtgcacaggaaccttgtcacaaaa
ctcaaacctcaccaggttgatggggtgcagttcatgtgggactgttgctgtgaatctgta
aaaaaaattgagaagtctcctggctccggttgcattctcgcccattgcatgggtctgggg
aaaactctgcaggtggtgacgttacttcacacgttgctgctttgtgaaaagctcgacttc
accacggcactggtggtttgtcccctgaacactgtccttaattggctcaatgagtttgag
aagtggcaagtaggattgaaggatgatgagagtttagaggtgattgagctggccacagta
aagaggccacaggagagagcatatgccctccagcggtggcaagaatctggtggggtgatg
atcattggctacgagatgtacagaaacttgacgcagggcaagaacaccaagagcaagaaa
ctcaaagagatctttcagaagacactggtagatccaggtccagacattgtgatctgtgat
gaaggtcacatcttgaagaatgaggcgtctgctgtgtccaaagcaatgaattctatcagg
acgaggaggaggattgtcctgactggaacacctctgcaaaataaccttgttgaataccac
tgcatggtgaacttcatcaaggagaacttgcttggatctgttaaggagttcaggaatcgc
ttcataaaccccattcagaatggtcagtgtgctgactccaccttacaagatgtccggatc
atgaagaagagggctcacatcctctatgagatgctggctggctgtgtccagaggaaagat
tacacagcgctcactaagttcttgccacctaaacacgagtatgtgttgtcggtcagagtg
actccaattcagtgtaaactctaccggtactacctggagcatttcacaggtgtagggaat
gctatggaggggggccggggccgcgcagggaccaaactcttccaggatttccaggtgctc
agcagaatctggacccatccctggtgccttcagctggactacatcagtaaagaaaacagg
ggtttctttgacgaggacagtatggacgagttcatcgcttcagaaacagaagaatcttcc
atgagtatgacctctgaggatgagaaggccaaaaagaaaaagaaagggaagggaaaaaag
agaggctctgatgactcggacagtgatgaagtggaggtcatcaaggagtggaacacctgc
actcggggcaaaaatggagagagtcgaagcagaccagagcttgtagaagaaccccggacc
attagctcaacaccaggtagtcccactcatgactggcacaaggagtttgttgttgatgct
gacagcgagatcctggagcactctgggaagatgatgctcctgtttgagatcctgcgcatg
gcagaggaagtggatgaaaaagtgcttgtgttcagtcagtctctcatctctctggaccta
atcgaggatttcctggagcttgcttgcagagctaaagatgatgaaaaggtttctccatac
aaaggtgaaggcaagtggttcaggaatattgactactatcgtctggatggctccaccaat
gccctcaccagaaagaagtgggccgaagagtttaatgacaccagtaatataagaggtcgt
ttgttcctaatttcaacacgagccggctctcttggtatcaacctggtggcagccaacagg
gtaatcatcttcgacgcctcctggaacccctcttatgatgtccagagtatcttcagggtt
taccgttttggccagactaggaccgtttatgtgtacaggtttctggctcagggtacaatg
gaggcaaagatttatgaccgtcaggtaaccaaacagtctctagcgttccgggtagtggac
cagcagcagattgagaggcactttacaggtgtagagctggcggagctctacacctttgag
ccggaaatgttggatgatccctccgcgaagaagagcaagaaagccacacctgtgctcccc
aaggatcccttcctggccgagatgctgaagaataataaggaccagattgtgtgttatcat
gaacatgactccctgctggaccacaaggaggaagaagccttgagcgaggaggatcgcaag
gctgcctggacagagtatgaagcagagaaaaagggtgtgttcgtgaggaacaaccagtca
gcatacaaccagatggacatgggcaactccaactacttctccttcaacatggcggctttg
gcctccatgaccaaccagcagctggaggaccttataaaccagggacgacagaaagtcatt
gacgcaacaaattcacttaagactgtagcacgggagtcactggaagatgccatcgccaga
ctgtggaaggagaacccggcactcacagagactcaggtccagtctatggctctaggtcaa
caggccaatctggagctggagatcaagcgcagggaagctgtgtaccgggacgtcctcacc
aggcagcagacgctgatgatgtacgtgcagaagctgatcaccaacaggaaggtgcaggag
cagcagatggccatggctaaccaggccagctacctgaaccagctggccatgcagaatggc
atgatgggaggtggcgggctcagtcaaatggacctggtggggctttaccagcagctccac
ggcctgggctctcatccaggcatgggcaagaatcctgggccctcaaagggcctgtag
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integrated database retrieval system
