Clinocottus analis (woolly sculpin): 137791151
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Entry
137791151 CDS
T10471
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03030
DNA replication
cana03420
Nucleotide excision repair
cana03430
Mismatch repair
cana03440
Homologous recombination
cana03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137791151 (rpa1)
DNA replication proteins [BR:
cana03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137791151 (rpa1)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137791151 (rpa1)
MMR (mismatch excision repair)
137791151 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
137791151 (rpa1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137791151
NCBI-ProteinID:
XP_068441991
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Position
Unknown
AA seq
600 aa
AA seq
DB search
MTSLSEGAIEALSNGIGGNDAVLQLVNLRKIDSGNGPTRFRVMMSDGVHTLSSFMLSTQL
NYMAEENLLAPNCICILKKHVTNILKDKRRVVIILEIEVIKSAADVAGKIGDPTPFVEGQ
VKGPQSAPNPETRQPLQQQVRNEGQKGFNRDFGKKTLTPSAMPGTPGGSAKVVPIASLNP
YQSKWTIRARVTNKGSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFFSLVEVG
KVYYVSKGSLKIANKQYTAVKNDYEMTLNGESSIIPCEDSSDVPVMQCDFVSIGDLENRE
KDAIIDVIGVCKSVDEVTRLTTKANKEVSKRTLNLMDMSGKLVTVTLWGEEAEKFDGSGQ
PIVAIKGAKLSDYGGRSISASFSSTLMINPDIPEAYKLRGWYDKEGHAVDGQSLTEARGS
GGGLTNWKTLSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQN
GMFRCEKCDKEFPNFKYRLILSANIADYADNQWVTCFQESAEAILGQNAAYLGQLKDSNE
LAFDEVFQQANFNTFVFRSRVKLETYNDESRIKATVMDVKPVDHKDYSKRLILNIRKLAA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcctctcagagggtgcgatagaggctctatcaaatggcattggtggtaatgac
gcggttcttcagttggtgaaccttcgcaagattgacagtggaaatggtccaacacgcttt
cgagtgatgatgagtgatggagtgcacactctgtcctccttcatgctttcaacgcagctg
aattacatggctgaggagaacctcctggccccgaactgcatctgcattctgaagaagcat
gtgaccaatatactgaaggacaaacgacgggtagtgatcattttagaaattgaagtcatc
aagtctgctgcagatgttgctggaaaaatcggtgaccctactccttttgtcgagggtcag
gtcaaaggccctcagtcagcaccaaaccctgaaacccgccaaccgctacagcagcaagtt
agaaatgaagggcaaaaaggtttcaatagagactttgggaaaaagaccctaaccccatct
gctatgcccggtactccaggaggcagcgctaaagttgtgcccatcgccagcctcaacccc
tatcagtccaagtggaccattcgtgctcgtgtaaccaacaagggcagcatccgtacctgg
agcaactctcgtggtgacggcaaactcttctccatggagattgtggatgagagtggagag
ataagagtgactggttttaaccaagaggtggacaaattcttcagcctggttgaggttggc
aaggtctactacgtctccaagggctccctgaagatcgccaacaagcagtacacagcggtg
aagaatgactatgagatgactctcaatggagagtccagcatcatcccctgtgaagacagc
agtgacgtccccgtgatgcagtgtgactttgtctccatcggtgacctggaaaacagagaa
aaagatgccatcattgatgtgattggagtgtgtaagagtgtggatgaagtgacccgcctc
accaccaaggcaaacaaggaagtatccaagaggacactcaacttgatggacatgtctggg
aagctggtgacggtcacgctgtggggagaggaagcagaaaagtttgacggctctggacag
cccattgtagccataaagggggcaaagctttcggactatggtggccggtcgatctcggca
tccttcagcagcaccctgatgatcaacccagacatccccgaggcttataagctcagaggc
tggtatgacaaggagggccatgccgtggatggacagtcgctgacggaggcgagaggcagc
gggggaggactcaccaactggaagactctatctgacgttaagacggagcacttaggacac
ggagacaaggcagactactacacctgcatagcaaccatagtatacctgcgcaaggaaaac
tgcctctaccaggcctgccccagccaggactgcaacaaaaaagtggttgaccagcaaaat
ggcatgttccgctgtgaaaagtgtgacaaagagttccccaacttcaagtaccgcctcatc
ctttctgccaacattgcagattacgcggacaaccagtgggtgacttgcttccaggagagt
gcagaggccatccttggccagaatgcagcttacctggggcagctcaaggactcgaatgaa
cttgcctttgacgaggtcttccaacaagccaatttcaacacttttgtcttccgcagcaga
gtgaagctcgaaacatataacgatgagtccaggatcaaggctaccgtgatggatgtgaag
cccgtggaccataaggactacagcaagcggttgatcctcaacataaggaaactggctgct
tag
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