Clinocottus analis (woolly sculpin): 137791238
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Entry
137791238 CDS
T10471
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137791238 (rlim)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137791238 (rlim)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137791238 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
137791238
NCBI-ProteinID:
XP_068442053
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MEGSDSLEQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDDDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPEQQNNSTSIPSTESVEDPVEPPENSEDPANGDSLLDWLNTVRRTG
NTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQATAEGEQESPEGQEVGAN
ADPLVVNTDPLVVNADPLVVNADPLVANADPLVANADPLVANADPLVANADPLVANADPL
VSTGEPLVSTGEPLVSIGEPLVSIGEPLVSIGEPLVSIGEPLVSIGEPLVSIAEPEVSIA
EPEVSIAEPEVSIAEPEVSIAEPEVSIAEPEVSIAEPEVSIAEPEVSIAEPEVSIAEPEV
SIAEPEVSIAEPEVSMAEPEVSMAEPQVSMAEPQVSLAEPQVSLAEPQVPMETEVMEEPV
VEELAIIVEPQPELEEVVSQEIFGQPRSPSALSVQPPLSPSPRRGQRRARSRSPEPRRTR
ARTARSRSPLNLDQQDGFRNPNNAHSAQGLNAVPNTPLVPQVEGSSRTRQHVLSRQSTAD
SDVQLSRAGAETVPEAQNMGSQEGEAAGGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDS
IASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEAT
SMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGASTPADLAEALNNPDAAAVAAPVADV
DEPPVAAGVRTRTAESDIDEGLATAPPPSGGRARPRPPISLEEPSSLPFLRLAHFFLLND
DDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDR
WLSENSTCPICRRAVLVSANRESVV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcaaagtggcagtgaccagcctgagtcacaacgcagg
aggcagctggaccgcctggacagggaggaggccttctaccagtttgtcaacaatctaagt
gatgatgactatcgtctcatgagggacaacaatcttttgggcaccccaggagaggtgaca
gaggatgagctgtttagtagacttcagcaaataaaggatggtccagaacagcagaataac
agtactagtatccccagcactgaaagtgtagaagatccagttgaaccaccagaaaactct
gaggatcctgccaatggggatagtcttttagactggctgaacacagtaaggcgcacaggc
aacacaaccagaactggtcatcgtggaaaccagtcatggcgggccgtaagccagaccaac
ccaaacagtggtgattttcgcttcagcctggaaatcagtgtgaatcgcaacctggctgaa
cagcaagcaactgctgaaggggagcaggagtctccagagggtcaagaagtgggggcgaat
gctgatccactggttgtgaatactgatccactggttgtgaatgctgatccactggttgtg
aatgctgatccactggtggcgaatgctgatccactggtggcgaatgctgatccactggtg
gcgaatgctgatccactggtggcgaatgctgatccactggtggcgaatgctgatcctctg
gtgtccactggtgaacctctggtgtccactggtgaacctctggtgtccattggtgaacct
ctggtgtccattggtgaacctctggtgtccattggtgaacctctggtgtccattggtgaa
cctctggtttccattggtgaacctctcgtgtccatcgctgagccagaggtgtccatcgct
gagccagaggtgtccatcgctgagccagaggtgtccatcgctgagccagaggtgtccatc
gctgagccagaggtgtccatcgctgagccagaggtgtccatcgctgagccagaggtgtcc
atcgctgagccagaagtgtccatcgctgagccagaagtgtccatcgctgagccagaagtg
tccatcgctgagccagaagtgtccatcgctgagccagaagtgtccatggctgagccagaa
gtgtccatggctgaaccacaggtgtccatggctgaaccacaggtgtccttggctgaacca
caggtgtccttggctgaaccacaagtgcccatggagacggaagtgatggaagaaccagtt
gtagaggaattggctatcatagtggaaccacagcctgaattagaagaagttgtttcacaa
gagattttcggacaacccaggtcaccttccgccctatcggtacaaccaccactttctcct
tctccacgcagaggacaaaggagagctcgcagccgtagtccagaaccacgcaggactaga
gcccgtactgccaggagccgctcacctctcaacctggatcagcaggatggttttcgtaat
ccaaataatgctcacagcgctcaaggcctcaacgctgtcccaaatacaccccttgtgcct
caagtggagggcagttctcggactcgacaacatgttctttctaggcaaagcacagctgac
agtgatgttcagctgtctagggctggtgcagaaacggtcccagaggcccaaaatatggga
tctcaggaaggagaagctgctgggggagaagggggcgcagctggccgccgtccccctact
attatgcttgatcttcaggtgcgccgtgtgcgtccaggcgaatatcgtcagagagacagc
attgctagccgaacccgctcgcgctctcagaactcaaacaacacatttctttatgagagt
gagcgtggtggatttcgtaggactttctctcgctctgaacgtgctggtgtgaggacctac
gtcagcactattcgcatccctatccgaagaatctctgatgcaggtttgggagaggcaacc
tcaatggctctccaatctatgattaggcagataatgactggttttggtgaacttggctac
ctcatggattcagactctgattcttcagattcaaaccgtggagccagcacacctgcagat
ctggctgaagccctgaacaacccagatgctgctgcagttgctgctcctgttgctgatgtt
gatgaaccacctgtggctgcaggagtcaggacaaggacagctgaatctgatattgatgag
ggccttgccactgcaccacctccctctgggggtagggctcgacctagaccacctatcagc
ctcgaggagcccagctcactgccctttctgcggcttgcccactttttccttctaaatgat
gatgacgaggaccagccccaagggctgaccaaggagcagattgacaacctctcaatgcgc
aactttggtgaaagtgatgccctgaagacttgcagtgtatgcataacagaatatgcagaa
ggtaacaagctacgtaagctgccctgctctcacgagtatcatgtgcactgcattgatcgc
tggctctccgaaaactcaacttgtcccatctgccgcagggctgtcttggtatcggccaac
cgggagagtgtggtgtag
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