Clinocottus analis (woolly sculpin): 137791306
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Entry
137791306 CDS
T10471
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cana03009
]
137791306 (utp20)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137791306 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
137791306
NCBI-ProteinID:
XP_068442228
LinkDB
All DBs
Position
Unknown
AA seq
2845 aa
AA seq
DB search
MKIKSKSSYHKSENTYKFLTFAERLAKVNINVIHRIDRTGAYEEEVETYFSEGLTKWRDL
NLTEHFTTFLKEVSNPSQSFNMLVFHQKSIVASLKTHLAVKDSLAFQPLLDLVVQLARDL
QTDFYPHFPDFFILITSLLETKDTEVLEWAFTCLSYLYKYLWRVMVKDMTNIYSLNSTLL
EHKKEHIRNFAAESFSFLMRKVPDLDALLNHVFSDLQQHPDKAEGAGQLLFEMCKGVRKM
FHSCAAKALPVALRKLGPTTNTGVSLPWDTVKEALDHMAQAAANHVDREHFLVLWESLQD
SVVEVLAVVEAKGEEAEPATEQLERLLFILHTLVSHKDGAKVTKSEAVCQTVLRLIQSSS
LSASCSRLVLQITSSLLLGENINLTKALTQETVQKVFGSTMGQDLILEFSKEMFTMKQFE
QLFLPSLLRFTAGLFGSGDPLSRHCGLDALVSLILAKAPPPTDGSMAFETYPLLFTGQTT
GRVFATKDDGQASRSPSEQPAVPEMVLSLIQLPEEQNQSITDLSLPWAALMLLPHLRPIA
PASVVPAVTAFLNHILCEIEAEKLGKAGLFVAGQALSCLLTLDGSAQLLSLVTVDKINSI
LQKFPTDLSALLLGDLYYSRLSLSGVSEHLSHNALLELHQMLHANLSSNISKIRLLTLRI
LSQFEAELHPQTEGEENVEVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLP
LGPPGAIQQVPLRYLIAMLFVNFSPLWDTVIELLVSHARGMDNKDFWRVYHEHLEMVAGK
AEKELRESDDDDDDDDDDDEEESRLEGEPGCDVIESGDVGVLFLEQLKSTSSPDERTDFP
NFRGLLWRCMTQFPDRVEPRSRELSPLLLRFIRNEFYRTDLLVAPTQDLRKVKDAALEES
GMAVEEDGERGDGDEEEEAEEGGRQQKKAPPKRAAAKQLIAHLKVFAKFTSPRSLYMESS
LSELYNQLLCHQDQQIQRMALECVLTYKDPHIVPYKENLERLLDDKHFKDEIIHFNISET
GVIDASHRTRLIPLLMRLLFGRLRSKAGSKFQGKASASARSSIILRFLAGCQSEELGIFI
DLLLEPVCHHSEGSCLAAVEKAIAETDVGAVLPLGRQHSLLNIIHVVLQKLGHLIHSYLP
KVLQILLCVTASVSIVLNKRDQLRPGCIGPLKNLRRLGVLRIQDFFDGFDSYSFSADELD
AVFQAVVWPQVCRLPTESPYSPTPLLKLIHVWCKNARYFPLLAKQRPDQPECDVLLNVFA
LLSAKKASPVTIGVVMDIAEFLATAEDFVASETETALSVNGCVFPQPKEGSLVTADSLRQ
GSSVLLPHISTMLRYLSGVVRNTDRLKKKKYRKQVAKELNILSKVSRFVSDKEQSSVLIS
LLLPYLQKSFNPQETEIDILATVQNLLRQCVQPSAFLRPLGKLFAVIHHKLPRQALTNVF
QTLSDLEPSLAYITDLASKLNAFDSRHLDEVHFDVRLAAFQDASRRVRDMTTLDMDYIYT
IIHNCFHTFEIGDMSLGDNATLCLSAVITQLAAVGPGEQLYKDVVQHTILDAVHKGLRSK
TDSVQHEYTTVLACLVKTFPAKREFRDLVQLTNYNDLESDFFEHMKHIQIHRRGRALRKL
AKHLTEGQVALTPRSLQNYIMPYAMTALLDEKMLKHEGMISASVEIVGAVCRKLTWSKYL
SYLKHFIHVLQTGQAEQKLAVSLLITVLEAFHFDHETLSREMEAAKAREAGTVAVDAEDE
EQAAAEEQAAAEELAASDDEEAMEVDGKTAPADVPMEADTTGGEEHVASKAGATSEAKRP
ADPKPFAVSSGLPQSTEELETLIRGIHQTVQTSVLPRLHKCLTAKIKRDDEHKAVKSKDV
KEEEVARIPIAFAMVKLMQTLPPHIMEVNLPGILMKVCVVLRNRFQEVRDVARGTLVKII
ETLGYRYLQFLLKEMQGLLVKGYQVHVLTFTVHQLLSVLTPTLKSGDLDSCMNMLIDIFN
NELFGPVAEEKEVKGIVSKLMEARHSKSMDSYELLGHFCSKESVTKFLLPLKELLENSSS
LKVCNRVGAVLRRLVLGLLVNEGMTAQDILLLCHSLVSQSLPLLTKRDREKASVKPPPDP
RLPPPSCLLLPPTPKRGGQKAPVSSRTNMHILVDAGLKLLHLSLKKSKVTSSDHTALEML
DPFVLLLLECLNSMHVKVITEALVAFTWLLKFPLPAVEQNANELTKHLFVLLKDYSKAGA
ARGENFVLVQNCFKAITILVKNVKHAQISETQLQVLLGYAEEDIYDQSRQATAFGLLKAI
LSKKLIVPEMEQVMTKVASLSVNGSNGMIRIHCRQIYLKYLLDYPLGQKMRWHLDFVVAQ
LDYEHDTGRESVLEMLAYIFQTFPKNMLAKRSGLFFAPLALVVVNDDSARCKKMAAMAIK
ALLAKLDLNHQNKLFSLVTNWLKAEKASLRRLGAQVCGLFVELEEENFARRLNDLLPLLE
KEINPDKYEDIEEEEDERGADRLLFSYLTLFTKLSKHCGLLDLRKPHDTLCSIWGHIEAH
LRYPHCWVWLTASQLFGQLFAAHPAEQLVAAWRGEGDASSQSPATAFLSSNLDKKIRELA
LSFCHQLQSKFLDVPSGEQVIKNLLFVGKVIYLISPESDVTPPQEEPRKEEEEQNADGEK
EEEKEAEGEVEDEDEGREKDNEEEEEEDGNDKDDRLPSLLWLIKKLSLMAKREAAFTPKV
PLRRTCVFKFMGAIAMDLGKERLGPYLTTLITPLYRELDSTYADQDPTLKNLAQELIELM
KRSVGLEKFSLAFSAVQKEFSQRRAARKRHRAMQAVANPEIAAKKKLKKHKNKIEAKKRK
IEFLRPGYKAKRQRGQALKDLAMVQ
NT seq
8538 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaatccaagtcttcgtaccacaaatctgagaatacctacaagtttctcact
tttgctgaaagacttgccaaagtcaacattaatgtcatccatcgtattgacaggactgga
gcttacgaagaggaagtagaaacctacttctctgaaggactgacaaaatggagagacctc
aacttgacagagcatttcacgacttttttgaaagaggtttccaacccgagccagtcgttc
aacatgctggttttccatcagaagtcgatagtggcgagtctgaaaacgcacctggccgtc
aaggacagtttggccttccagccgctgttggacctggtggtgcagctggccagagacctg
cagacggacttctaccctcacttccctgacttcttcattctgatcacctcgctgctggaa
accaaggacacagaggtcctggagtgggctttcacctgtctctcctacctctacaagtac
ctgtggagggtcatggtgaaggacatgaccaacatctacagtttaaacagcacgttgttg
gagcacaagaaggagcacattcgcaattttgcagcagagagcttctcttttttgatgaga
aaggtcccggatctcgatgccctgctgaatcatgtgttctcagacctgcagcagcacccc
gacaaggcggagggagcaggtcagctgctgttcgaaatgtgcaagggagtccgaaaaatg
ttccactcctgcgctgcaaaagctctccctgtagctttgcgtaagctcggacccacaacc
aacacaggagtgtctctgccgtgggacaccgttaaagaggctctggatcacatggcccag
gctgcggccaatcacgttgaccgagaacacttcctggttctgtgggagtccttacaggac
agtgtggtggaggtcttggctgttgtggaggcgaaaggtgaagaggcggagccggcaaca
gagcagctggagaggctgctgttcattctccacaccctggtgtcccacaaggatggagcc
aaggtcaccaagtcagaggctgtctgccagacggtgttgaggctgattcagagctcgtct
ctgtcggcttcttgttcccgtctcgtcctccagatcacctcctccctgctcctcggcgag
aacatcaacctgacaaaagcactcacccaggagacggttcaaaaggtgttcggcagcaca
atggggcaagatctgatactggagttcagcaaggagatgttcaccatgaagcaatttgaa
cagctcttcctcccaagcctgttgcgtttcacagcggggttgtttggcagcggcgacccc
ctgtctcgccactgtggcctggacgcgctggtcagtctgatcctcgccaaagccccgccc
cccacagacggctccatggcctttgaaacctacccactgctgttcaccggacagaccaca
ggcagagtgttcgccactaaagacgacggtcaggccagccgttcaccatcggagcagccg
gcggtgccggagatggtgctctccctgatccaacttcctgaggagcagaaccagtccatc
accgacctgtccctgccctgggctgctctgatgcttctgccacacctcaggcccatcgct
ccagctagtgttgtcccagctgtgaccgctttcttaaaccacatcctgtgtgagattgag
gcagagaaacttggaaaagctggtctgtttgtagccggacaggctctgagctgcctcctc
actctggacggctctgcccagcttctctcactggtcactgtggacaagatcaactccatc
ctgcagaagttccccacagacctgtccgccctgctgctcggagacctgtactactctcgc
ctgtcgctcagcggcgtttcagagcacctgtcccacaatgcactgctggagctccaccag
atgctgcacgccaacctctcctccaacatctctaagattcggctgctgactctgaggatt
ctctctcagtttgaggcggagctccatccacagaccgagggcgaggagaatgtggaggtg
cagccggtgttcgcagtgtgcctgcaggctgagctggtgccggcctcggtgcaggactac
agggacaagctgcttcacctccgcaagctgagacacgacctggtgcagcgcagtctgcct
ctggggccgcccggcgccatccagcaggtgcctctgcgatacctcatcgcaatgctgttc
gtcaacttcagcccgctgtgggacacagtcattgaacttctcgtgagccatgccagaggg
atggacaacaaggacttctggagggtctaccatgaacatctggaaatggtggcagggaaa
gctgaaaaagaattgcgggagagcgatgatgatgatgatgatgatgatgatgatgacgag
gaggagtctcgtctcgagggcgagccgggctgtgatgtcatcgaaagcggggacgtgggg
gtgctgttcctggagcagctgaagtcgacctccagccccgacgagaggacggacttcccc
aacttccgcgggctgctgtggcgctgcatgacgcagttccccgaccgagtggaaccacgc
agccgggagctgagcccgctgctgctccgcttcatcaggaatgagttttaccgcaccgac
ctgctggtggcgcccactcaggacctgaggaaggtgaaggacgcggccctagaggagtct
gggatggcggtggaggaagacggggagagaggggacggcgatgaggaggaggaggcagag
gagggaggcagacagcagaagaaggctcctcccaagagagctgctgccaagcagctgatc
gcccatctgaaggtattcgccaaattcaccagccctcgctctctgtacatggagagcagc
ctcagtgagctgtataaccagttgctctgccatcaggaccagcagatccagcggatggcg
ctggaatgtgttctcacatacaaagacccccacatagtaccctacaaagagaatcttgag
aggctacttgacgacaagcacttcaaagacgagattatccatttcaacatttctgagacg
ggagtgattgatgcgtcacaccgaaccagactcatccctttactcatgaggctcctgttc
ggccgtctgcgcagtaaagcaggaagtaagtttcagggcaaggcgagcgcctccgcccgg
tcctccatcatcctgcgttttctggcaggatgccaatctgaggagctgggaatattcatc
gacctgctgctggagcccgtctgccatcacagtgaaggttcctgcctggcagccgtggag
aaggcgatagctgagaccgacgtgggggctgtcctgccgctgggccggcagcacagcctg
ctgaacatcatccatgtggtgctccagaagctgggccacctcatccacagctacctgccc
aaggtgctgcagatcctgctgtgtgtcaccgcctccgtgtccatcgtcctgaacaagagg
gaccagctgcgtccaggttgcatcggtcctctgaagaacctgaggcgactcggcgtcctg
aggatccaagactttttcgacggcttcgactcctacagcttcagtgcagacgagctggat
gctgtcttccaggctgtggtctggcctcaggtgtgtcgtctccctacagagagcccttac
tccccaacccctctgctgaaactcatccatgtgtggtgcaaaaatgccaggtacttcccc
ctcttggccaagcagaggcccgaccagccggagtgtgacgtcctccttaacgtcttcgcc
ctcctctcggctaagaaagcttcccccgtgaccatcggcgtggtaatggacatcgccgag
ttcctcgccaccgctgaagactttgtcgcctcagagactgagacggcgctgagcgtcaac
ggctgtgtgttcccgcagcctaaagagggctctcttgtcactgccgactccctgcgtcag
ggctccagtgtgctgctgccccacatatccaccatgctgcggtacctcagcggagtggtg
cgcaacacagaccgactcaagaagaagaagtacaggaaacaggtggcgaaagagctcaac
atcctctccaaggtcagtcgattcgtgagcgacaaggagcagagctcggtgctcatcagc
ttgctgctgccctacctccagaaaagcttcaaccctcaagagacagaaatcgacatcctg
gccacggtgcagaacctgctgcggcagtgcgtgcagccgtctgctttcctgcggcctctg
ggcaaactcttcgccgtcattcaccacaagctgcccaggcaggccctcaccaatgtcttc
cagactctgtcagatctggagccttccctcgcctacatcactgatttagcatcaaagctc
aacgcattcgatagtcgccacttggacgaggttcactttgacgtgcgcctcgcggctttc
caagacgcctccaggcgggtcagggacatgacgactctggacatggactacatctacacc
atcattcacaactgctttcacacctttgagattggcgacatgtcgctgggagacaacgcc
accttgtgtctgtctgcagtgatcacccagctggcggcggtcggccccggagagcagctc
tacaaggacgtcgtacaacacaccatcctggacgctgtacacaaggggctgcgcagcaag
acagatagtgtgcagcatgagtacaccacagtgctggcctgcctggtgaagacctttccc
gccaagagagagtttagagacctggtacagctcaccaactacaacgacctggagtctgac
ttctttgagcacatgaagcacatccagatccaccgtcgtgggcgtgccctgaggaagctg
gccaagcacctgaccgagggccaggtggcgttgacgcctcgttctctccagaattacatc
atgccgtacgccatgaccgccctgctagacgagaagatgctgaagcatgagggcatgata
tcggcgtcggtggagattgtgggcgctgtgtgccgcaagctgacctggtccaagtacctc
tcctacctcaaacatttcatccacgtcctgcagacggggcaggccgagcagaaactggct
gtcagtttgctgatcacagtcctggaggcttttcattttgaccacgagaccctcagcaga
gaaatggaagcagccaaggccagagaggctggtacagttgcagtcgacgctgaggatgag
gagcaagctgcagctgaggagcaagctgcagccgaagaactggccgcgagcgacgacgag
gaggcaatggaggtagacggcaagaccgctccagctgacgtccccatggaagcggacacc
accggcggagaagagcacgtcgcctctaaagctggagccacctctgaagccaagaggcca
gcggatccaaagcccttcgcggtatccagcgggctgccgcagagcacagaggagctggag
actctgatccgcggcatccaccagacggtgcagaccagcgtgctgccgcgcctgcacaag
tgcctcactgcaaagataaagcgggacgatgagcacaaggcagtgaagtcgaaggacgtg
aaggaggaggaggtggcgaggataccgatcgccttcgccatggtcaaactgatgcagacg
ctgcctcctcacatcatggaggtcaacctgcctgggatcctgatgaaggtgtgtgtggtg
ctgaggaaccgcttccaggaggtccgcgacgtggcgaggggaactctggtgaagatcatc
gagactttaggctacaggtacctgcagttcctgctcaaggagatgcaggggctgctggtc
aagggctaccaggtccacgtgctaacattcacagtccaccagctgctgtcagtcctcact
ccaaccctgaagagcggagacctggactcgtgcatgaacatgctgatcgatatcttcaac
aacgagctgttcgggcccgtggccgaggagaaggaggtgaaggggatcgtctccaagctg
atggaggctcggcacagcaagagcatggactcctacgagctgcttggccacttttgcagc
aaggagagcgtaaccaagttcctattgccactgaaggagctcctggagaactcctcgagc
ctgaaggtgtgtaacagggtgggtgccgtgctgaggcggctggtcctgggtctgctcgtc
aatgagggcatgactgctcaagatatcttgctgctgtgccacagcctggtcagccaaagt
ctgccgctgcttaccaagagagaccgagagaaagcctcggttaagcctcccccagacccc
agactgccccctcccagctgcctgctcctgcctccaactcccaagagaggcggtcagaaa
gctccggtcagcagccgaaccaacatgcacatcctggtggacgctggcctcaagctgctc
cacctgagtctaaagaaatccaaagtgacgtcgtccgatcacacggctctggagatgctg
gatcctttcgtgctgctgctgctcgaatgcctcaactccatgcacgtcaaggtgatcaca
gaggccctggtcgcgttcacttggctgttgaagttccctctgccagcagtggagcagaac
gccaacgagctgaccaagcatctctttgtcctgctgaaggattactccaaggccggagcc
gcccgcggggagaacttcgtcctcgtccagaactgcttcaaggccatcaccatactggtg
aagaatgtcaaacacgcccagatttcagagacgcaactacaagtgctgctgggatatgca
gaggaagacatctacgaccagtctcgccaggccacggccttcggcctgctgaaggcgatt
ctgtccaagaagctcattgttccagagatggagcaggtgatgacaaaagtcgcctcgctt
tccgtaaacggcagcaacggaatgatcagaatccactgccgacagatctatctgaagtac
ctgctggactaccccctggggcagaagatgagatggcacctggacttcgtggtggcccag
ctggactacgagcacgacaccggcagggagtctgtgctggagatgctggcctacatcttc
cagacgttccctaagaacatgctggccaaacgcagcggcttgttcttcgccccgctggct
ctggtcgtggtcaacgatgactcggcacgctgtaagaaaatggccgccatggccatcaag
gctctgctggccaagctggacttgaaccaccagaacaaactgttctccctcgtcaccaac
tggctgaaagcagaaaaggccagcctgcggcgtctcggggctcaggtctgtggtctgttc
gtggagctggaggaggagaactttgcccgtcgcttgaacgacctgctgcccctgctggag
aaggagataaacccggacaaatacgaagatatcgaggaggaggaggacgagcgaggagca
gacaggctgctgttcagttatctgacgctcttcaccaaactgagcaaacactgcggcctg
ctggatctcaggaagcctcacgacaccctgtgtagtatctggggtcacattgaagcccac
ctgcggtaccctcactgctgggtgtggctgaccgcctcgcagctctttggtcagctgttc
gcagcccatccggcagagcagctggtcgctgcatggagaggagaaggagatgcttcctct
cagtctccagccacggcctttctctccagcaacctggataaaaagataagagagttggcg
ttatctttctgccatcaactccagtccaagttcctagacgttccgtcaggagagcaggtg
atcaagaacctgctgttcgtcggcaaggtgatctacctcatttctcccgagtctgacgtc
accccacctcaggaagaaccaagaaaagaggaggaggagcagaatgctgatggggagaag
gaggaagagaaagaagcagagggggaagttgaagatgaagatgaggggagagaaaaagac
aacgaggaggaagaagaagaggacggcaatgacaaggatgatcggcttccttctctgctg
tggctgataaagaaattgtctctgatggccaagagagaggcagcattcactcctaaagtt
cccctgaggagaacgtgtgtgttcaagttcatgggagcgatcgccatggacctggggaag
gagcgcctgggcccctacctgaccaccctcatcacgccgctctacagggagctggacagc
acctatgcagaccaagatcccaccctgaagaacctggctcaggagctgatcgagctgatg
aagaggagcgtggggctggagaagttctctctggccttctctgcggtccagaaggagttt
tcacagaggagagctgcacgcaaacgacacagagccatgcaggcggtggcgaacccagaa
atcgcagccaagaagaaactcaagaagcacaagaacaaaatagaggccaagaagaggaag
atcgagttcctccggcccggatataaagccaagaggcaacggggccaagcgctcaaagac
ctggccatggtgcagtga
DBGET
integrated database retrieval system
