Clinocottus analis (woolly sculpin): 137791315
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Entry
137791315 CDS
T10471
Symbol
ccdc88b
Name
(RefSeq) coiled-coil domain containing 88A
Organism
cana Clinocottus analis (woolly sculpin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
BRE1
Motif
Other DBs
NCBI-GeneID:
137791315
NCBI-ProteinID:
XP_068442244
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MDSNIMKIIEEFMESALAQWVQLFEKMVEREDGVPLYSQYMEVNSIPQSARDRYVRLTNG
IFLNEIMRIIDPNPKVERLYDSERDDHMQRVQNFSILNRHIRAFYQEDLQQLILMPLPNV
AILGQDPITEAAVEELRRLLLLLLGCAVQCEEKEAFIQQIQSLNIQTQAAIASCIQQVTQ
DPRMVLPLRWEELVEVEGADFQLVFTSMAKQIQNLLAQRDSHLERIAEVCREREVRSDSP
TAPLGGHSKESPQGLALQLADSKAKLRRLKQQLEDKGDQILDYNLEIQTMEDQLKKLQKE
NRSLQGDVRGMRALRDELDCARERAARTEQLQTELQSCKHRLRSLELTRTQLKEQQQLCA
ALQETKVLLEEQLADARARCSSIRELERDNLLLRHKIIDVEAERDTERQRVDELLEMNMS
LEADLRHSSSSSVPASVAAVHRRFLQSELDSDEELSDLIDQKSLSVEVGEASTLMLLGAE
QENAELRRRLEELQEADYPDTKDELACLETAHQNTLGEFQNLKNENATLMQRLEQLVTKL
QQVEDERKEEGVKKLDRKEDEKVERGVQGSESCRGEGEGRVRLMGVRERSGENIVTQREA
GVGEEILHIEGEAEEPCDEEVKSVRRGEAEGGQKEKEKDMKKEQTAMASSSEIQNHPKGL
EDDTESTAADQAVCSLSGADVELLTNRLQEAHEEADRQAIVAQDLRSKLGEQSKKSWEAE
QRLVVLEAELQRLKKAAESLGDARRQIEGLQSESLIMEEELCRLRSQAALHGMQTTVIAT
LEGERAALERDRDTLRSTTDALRSAQRKSDHLELSSQTLRAEVERQGRSLETSRRREEEL
EAELREATVEAESLARAREQALLEASRLEQEKELCQSELDSQRKEGRQREREAARLRQQL
ESTTLALEHSNQRARALDAEHRRVCQQLSESKELCSRLQDLEKEFSTRLTSMEEGKQQLQ
EQHADAQAKIHSLSQDLSNEQERSQKLSTEVERQCQKLQKAEADLKTTTSSLNQSEERIE
LLCQSLMKSESLLQFEKRRGSVEVETTSNSNSDSSDKAHISQKATQETSHLDQSPAAGKG
RDLSLIHNHATGEAERQLSERLIELEREKAVAFAEQEALLSRLTQSQEACEHLKEQLEAL
RRHSLSLQDSCTRLQTLNTQLQVEHASLSSQHAAVLVRCSESEARCAALEAESKVWARER
EESVARMEALRRDHDRMTGLQQRQEVELEELLDKHSQMRSNNRSLEAQHRELEARYKELL
DGKSQLDERELEMKMERKEMEAEAQRRLERERELERLKEDNERLQAQQKEGLASQAELLA
QGSVLRAELSNSQLERTRLEGELSGLRETNQSLDLSSARLTSQYQLLTQLKGNMEEENRH
LAEQNQSLLKENRALLEQSLERRDQHYSQQREYQEKLSELRREKQKLVEKIMDQYRVLEP
SMQPPASKAKKSNWIADRMKKLIKPRGGGRDGRALFTAMGSVENLADSTEFTSDTHTPQP
DPRSAPVSPCPTRKAPSQTELDISAPGTPTTRSSMRRKLGSRHGWGLGLARGGSGVSQSF
SPGDHKTPPRLRLRSGQNNSAVLWEGQRSETNTPQAADAVLSSQESVEEDEGRDNQHTTT
VTTPQRPEPEQSTLN
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggactctaacattatgaagataatagaagagttcatggaaagtgcgctggcgcaatgg
gttcagctgtttgagaagatggtggagagggaggacggtgtaccgctctacagccagtac
atggaagtaaactcaattccccaaagtgcccgggatcgttacgtgaggctgaccaatggg
atattcctcaatgagatcatgagaatcatagaccccaaccccaaggtggagcggctgtac
gacagcgagagagatgatcacatgcagagagtccagaacttttctattttaaatcgacac
atcagagctttctaccaggaggacctgcagcagttgatattgatgcctctcccaaatgtt
gccattctggggcaggaccccataacagaggcggcagtggaagagctcaggcgactgctt
ctgctcctactcggatgtgctgtgcagtgtgaggagaaggaggcgttcattcagcagatc
cagtctctgaacattcagacccaggcagccattgccagctgcatacagcaggtgactcag
gatcctcgcatggtgctgccgctgagatgggaggagctggtcgaggttgaaggtgcagac
tttcagctggtgttcacctctatggccaaacagatccaaaacctgctggcacagagagac
tcacacctggagaggatagcggaggtgtgtcgtgagcgagaggtccggtctgactcgccc
acggcgcccctgggtggtcacagcaaggagtcaccccaaggtctggctctccagctggca
gacagcaaggccaaactccgccgtcttaaacaacaactggaagataaaggtgatcagata
ttggattacaacctggagattcaaaccatggaggaccagctcaagaaacttcagaaagag
aaccgctctctgcagggtgatgtgaggggcatgcgcgcactgcgggatgagctggactgc
gcccgagagcgagctgcacggacagagcagctccagactgagctccagagctgtaaacac
agattgcgcagcctggagctcacacgcactcagctgaaggagcagcagcagctgtgcgca
gcactgcaggagaccaaagttcttctggaagaacagctagccgacgctcgagcgcgctgc
tcctcaataagggagctggaaagggacaatcttctgctgcgtcataaaatcatagatgtg
gaagcggagcgggacactgagaggcagcgggttgatgagctgctggagatgaacatgagc
cttgaggcggacctgaggcacagcagcagcagcagcgttcctgcttcggtcgctgcggtt
cacagacgttttctccaatcagaactggactctgacgaagagctaagcgacctgattgat
cagaagtcgctgagcgtggaggtgggtgaggcctcgacgctgatgctgctgggagcagag
caggagaacgcagagctgaggagacgactggaggagctgcaggaggctgattatccagat
acaaaagatgagctggcttgcctggagacggcacatcagaacacactcggagagtttcaa
aacttgaagaatgaaaatgccactttgatgcagcgccttgaacaactcgtgaccaaactg
caacaagtagaagacgagaggaaagaggaaggagtgaagaagttagacagaaaggaagat
gagaaggtggagagaggagtccagggctctgaatcctgcagaggagagggtgaaggaagg
gtgagattgatgggggtgagagagaggagtggagaaaacattgtaacccaaagggaagca
ggagttggggaagagattctccatattgaaggggaagcagaagaaccatgcgatgaagag
gtcaagtccgtaaggagaggagaagcagagggaggacagaaggagaaggagaaagacatg
aagaaagaacagactgctatggcatcaagctcagagatccaaaatcaccccaaaggtcta
gaagatgatacagagagcacagctgcagaccaggctgtttgttccctgtctggtgctgat
gtggagctccttacaaaccggctccaggaggcccacgaggaggctgaccgacaggcgatt
gtggcacaggacctgcgctccaaactgggggagcagagcaagaaaagctgggaggctgag
cagaggctggtggtcctggaggccgagctacagcgtctaaagaaagctgccgagagtctg
ggagacgcccgccggcagatagagggtcttcagtcggagagtctgattatggaggaagag
ctgtgccgcctgcggagccaagcagcgcttcatgggatgcagaccacggtcatcgccacc
ctggagggagagcgggccgcgctggagagagacagggacacgctgcgcagcaccacggac
gccctgcgcagcgcccagcgcaagagtgaccatctagagctctcctctcagactctcagg
gcagaggtggaacggcaaggtcggagtttggagacttctcgtcgtcgggaagaggagctg
gaggcagagctccgcgaggcaactgtggaggccgagtctctggcccgggcgcgagagcag
gcgctgctggaggcgtcaaggctggagcaggagaaggagctgtgtcagtcggagctggac
agccaacggaaggagggcaggcagagagagagagaggctgcgaggctgaggcagcagctg
gagagcacgaccctggccctggagcacagcaaccagagagctcgggccctagacgctgaa
cacagacgtgtgtgtcagcagctgtctgaatccaaggagctctgctctcggctgcaggac
cttgagaaggagttcagcactcgattaaccagcatggaggagggtaaacagcagctgcag
gagcaacatgcagatgctcaggccaagattcattctctgtcgcaggacctaagcaatgag
caggaacgctcccagaaactgtccactgaagtcgaacgccagtgccagaagctacaaaaa
gccgaggctgatttaaagacgacaaccagttctctcaaccaatcagaggagaggatagag
ttgctctgccagagccttatgaaaagtgaatctcttctccagtttgaaaagagaagagga
agtgtggaggtggaaactacgtccaattcgaattcagactcctcagacaaagcacacatt
tctcagaaagcgacccaggagacgtcacatctggatcaatcccctgcagctggcaaaggt
cgtgacctttccttgatccataaccatgccacgggagaggcagagaggcagctgagtgag
cggttgatagaactagaaagagagaaagcggtggcatttgcggaacaggaggctttgctg
tcgcggctgacccagtcccaggaggcatgtgagcaccttaaggagcagctggaggctctg
cgccggcactccctcagcctgcaggactcctgcacccgactacagacactcaacacccag
ctacaggtggagcatgcatccctaagctcccagcatgcagcagtgctggtgcgctgcagt
gagagtgaggcccggtgtgcggctctggaggccgagtccaaggtgtgggcgcgggagcgt
gaggagtcggtggccaggatggaggctctgaggcgggaccacgatcgcatgactggtctg
cagcagcggcaggaggtggagctggaggagctgctggacaaacactctcagatgaggagc
aacaaccgcagcctggaggctcagcacagagagctggaggccagatacaaggagctcctg
gatggtaaatcccagctggatgagagagagctggagatgaagatggagagaaaggagatg
gaagcggaggcccagaggagacttgagagagaacgagagctggagaggctaaaagaagac
aacgagaggctgcaggctcagcagaaggaggggttggcgtcacaggcggagctgctggct
cagggctcagtgctgagggccgagctgagcaactcccagctggaacggacccgactggag
ggggaactcagcggcctgagggaaaccaaccagagcctcgacctcagcagcgcccgcctc
accagccagtaccagctgttgactcagctcaaggggaacatggaggaggagaaccgacac
ttagcagagcagaaccagagtctgctgaaggagaaccgggccttactggagcagagcctg
gagcgccgagaccagcactactcacagcagagggaataccaggagaagctgagcgagctc
cgtcgggagaagcagaaattggtggagaagattatggatcagtatagagtcctcgagccc
agcatgcaacctccagccagcaaagccaagaaatctaactggattgcggacaggatgaag
aagctaatcaaaccccggggaggcggaagagatggacgcgccctcttcaccgccatgggc
agcgtggaaaacctggccgacagcactgaatttacatcagacacacacacacctcagcct
gacccccgcagtgctccagtctctccctgtcccacgagaaaagctccctcccagacagag
ctggacatctcggctcccggcactccaacaacgcgctccagcatgcgccgtaagctggga
tcccgtcacggctgggggctcgggctggcaagaggaggctctggagtctcccaatccttc
agtcctggtgaccacaaaacaccacctcgcctgcggctgcgctccggccagaataactct
gctgtcctttgggagggacaaagaagcgaaacaaatacaccccaggcagcagacgcagtg
ttgagcagtcaggagagtgtcgaagaggatgaaggcagagacaatcaacacaccacaaca
gtgacgacgccacaacgacctgagccagaacagtccactctcaattaa
DBGET
integrated database retrieval system
