Clinocottus analis (woolly sculpin): 137791367
Help
Entry
137791367 CDS
T10471
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137791367 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137791367 (rbm22)
Spliceosome [BR:
cana03041
]
Complex B
Other components
Prp19-related factors
137791367 (rbm22)
Complex C
137791367 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
137791367
NCBI-ProteinID:
XP_068442361
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGELKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKEGTSEMGTRLDPVPGLPGALPPPPTLDEEAPANYFNLDPSSSPAV
LNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctaggatccaacacctacaatagacagaactgggaagacgcggatttc
ccaattctgtgtcagacatgtttaggagaaaacccttacatccgcatgaccaaagagaag
tatggtaaagaatgcaagatttgtgcgcgaccgtttactgtgttccgatggtgtcctggg
acacgaatgcgtttcaagaaaacagaggtctgtcagacttgcagtaaaatgaagaatgtt
tgtcagacatgtctgctggacttggagtatggtttgcctattcaggttagagatactggg
ctatcagtaaaagatgaggttcctaagtcagatgtgaacaaggagtactacacacagaac
atggagagagagatagcaaatactgatggtactcggccagtcggccagttgggtaaagca
cccagctctagtgatatgttgcttaaactggcgaggaccactccatactacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tataggcacgagaagcccacagatcccgatgaccctcttgccgaccagaacattaaagac
cgttactacggcatcaatgacccggttgcagacaagctgctgaaacgggcctcaaccatg
ccccggctggacccaccagacgacaagtccatctccaccctctacatagggggtctagga
gatactgtcactgatggagagctcaagagtcacttttaccagtttggtgaaattcgcacc
attaccatcgtccagaggcagcagtgtgccttcatccagtttgctactcggcagtcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacgcaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggcatcaaagaaggcactagtgag
atgggcaccagactggatcctgttcctggattgcctggagctcttcctccaccaccaact
ttagatgaagaagctcctgcaaactactttaacctggaccctagctcctctcctgcagtc
ctgaatattgctctgcctccacctccaggcatcaaccctcctcctccagggtttggccct
ccaatgtttcaccccatgggtcacatggctccacctatgccccctccaatgagcatgaga
ccacctggtcaaatccactacccctctcaggatcctcagcgcatgggtgcccatgctgca
catggctctcgtcatggtgattag
DBGET
integrated database retrieval system