KEGG   Clinocottus analis (woolly sculpin): 137791367
Entry
137791367         CDS       T10471                                 
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137791367 (rbm22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cana03041]
    137791367 (rbm22)
Spliceosome [BR:cana03041]
 Complex B
  Other components
   Prp19-related factors
    137791367 (rbm22)
 Complex C
    137791367 (rbm22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded Nup35_RRM_2 zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_12 zf-CCCH_PARP12 zf-CCCH_10
Other DBs
NCBI-GeneID: 137791367
NCBI-ProteinID: XP_068442361
LinkDB
Position
Unknown
AA seq 427 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGELKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKEGTSEMGTRLDPVPGLPGALPPPPTLDEEAPANYFNLDPSSSPAV
LNIALPPPPGINPPPPGFGPPMFHPMGHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggcgacgtccctaggatccaacacctacaatagacagaactgggaagacgcggatttc
ccaattctgtgtcagacatgtttaggagaaaacccttacatccgcatgaccaaagagaag
tatggtaaagaatgcaagatttgtgcgcgaccgtttactgtgttccgatggtgtcctggg
acacgaatgcgtttcaagaaaacagaggtctgtcagacttgcagtaaaatgaagaatgtt
tgtcagacatgtctgctggacttggagtatggtttgcctattcaggttagagatactggg
ctatcagtaaaagatgaggttcctaagtcagatgtgaacaaggagtactacacacagaac
atggagagagagatagcaaatactgatggtactcggccagtcggccagttgggtaaagca
cccagctctagtgatatgttgcttaaactggcgaggaccactccatactacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tataggcacgagaagcccacagatcccgatgaccctcttgccgaccagaacattaaagac
cgttactacggcatcaatgacccggttgcagacaagctgctgaaacgggcctcaaccatg
ccccggctggacccaccagacgacaagtccatctccaccctctacatagggggtctagga
gatactgtcactgatggagagctcaagagtcacttttaccagtttggtgaaattcgcacc
attaccatcgtccagaggcagcagtgtgccttcatccagtttgctactcggcagtcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacgcaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggcatcaaagaaggcactagtgag
atgggcaccagactggatcctgttcctggattgcctggagctcttcctccaccaccaact
ttagatgaagaagctcctgcaaactactttaacctggaccctagctcctctcctgcagtc
ctgaatattgctctgcctccacctccaggcatcaaccctcctcctccagggtttggccct
ccaatgtttcaccccatgggtcacatggctccacctatgccccctccaatgagcatgaga
ccacctggtcaaatccactacccctctcaggatcctcagcgcatgggtgcccatgctgca
catggctctcgtcatggtgattag

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