Clinocottus analis (woolly sculpin): 137791371
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Entry
137791371 CDS
T10471
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04150
mTOR signaling pathway
cana04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
137791371 (lrp6)
04150 mTOR signaling pathway
137791371 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137791371 (lrp6)
Membrane trafficking [BR:
cana04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
137791371 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
137791371
NCBI-ProteinID:
XP_068442367
LinkDB
All DBs
Position
Unknown
AA seq
1619 aa
AA seq
DB search
MGVALGSLLLCSLWLLARGVPLLLYANRRDLRLVDAGQLKANATVLVGGLEDAAAVDYVY
SQGLVYWSDVSEEAIKRTVFNRSGPAGAAAVQTVVPGLASPDGLACDWLGSKLYWTDSET
NRIEVAELDGSLRKVLFWQELDQPRAIALDPERGYMYWTDWGEIPKIERAGMDGTNRSMI
IDKEIYWPNGLTLDYSLEKLYWADAKHNFIHRSNLDGSSREVVVKGELPHPFALTLYEDT
LFWTDWNTHSIHSCRKQTGGEQRVVHSDIFSPMDIHVFSAKRQDILVPCPCSVDNGGCSH
LCLLSPMKPFYQCACPTGVQLLEDGRTCRDGATQMLLLARRTDLRRISLDMPDFTDVVLQ
LDDVRHAIAIDYDPVDGFVYWTDDDVKAVRRARLDGSEAEFLVTLQVNHPDGVAVDWIAR
NLYWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEEPKIERAD
LDGLERLVLVNTSLGWPNGLALDYEDRRLYWGDAKTDKIEVMDMDGTGRRVLVEDKLPHI
FGFTLLGDFIYWTDWQRRSIERVHKRTAERQFIIDQLPDLMGLKAAYVHQAVGTNPCADS
NGGCSHLCLYKPRGVQCGCPIGLELVADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVA
IPLTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL
GKNLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDR
AAMDGTGRITLVADVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGQDREVIADDLPHP
FGLTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQAGWNACAA
TNGHCSHLCLAVPVSSFVCGCPAHFSLNYDNKTCSAPTSFLLFSQKSAINRMVMDEQQSP
DITLPIHSLRSVRALDYDPLDRQLYWIDSKQNLIRRAQEDGNQSMTVVSGLLGGPGQGLQ
LYDLSIDIYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGDHDKPRAIVVNPERGYMYFTN
LLERSPKIERAALDGTEREVLFFSGLGKPVALAIDNALGKLFWVDSDLRRIESSDLSGAN
RIVMADSNILQPVGLTVFGSHLYWIDKQQQMIERIDKTTREGRTKIQARIAYLSDIHAVH
ELDMREYGKHPCTWDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFS
CSSGEVDCIPQAWRCDGFAECDDSSDEEACPVCSPEEFQCDSRQCVSLSMRCNGEVNCQD
RSDESKCEVRCPPDQFSCSNGQCIGKHKKCDHNTDCTDNSDELGCYPTEEPPPPSNNTIG
SIVGVVMALFVVGAVYFVCQRVLCPQMKDDGETVANDFVVHGPSSVPLGYVPHPSSLSSS
LPGMSRGKSVIGSLSIVGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVR
SQYTAEFGYSSNSPSTHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKSGAAK
GYASDLNYDSEPFPPPPTPRSQYLSAEENCESCPPSPYTERSYAHHLYPPPPSPCTDSS
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcgcgctcgggagcctgttgttgtgctcgctgtggctgctggcgcgaggcgtg
cccctgctgctctatgctaaccggcgggacctgcgcctggtggacgccggtcagctgaag
gccaacgccacggtgctggtgggcgggctggaggacgcggcggcggtggactacgtgtac
tcgcagggcctggtgtactggagcgacgtgagcgaggaggccatcaagcgcactgtcttc
aaccggtcggggcccgccggcgccgctgcggtccagaccgtggtcccgggtctggcctcc
ccggacggactggcctgcgactggctggggagcaaactgtactggacggactcagagacc
aaccggatcgaggtggccgagctagacgggtccttgaggaaggttctgttctggcaggag
ctggaccagcccagggctatcgctctggacccggagcgagggtacatgtactggaccgac
tggggcgagatcccaaagatcgagcgtgcggggatggacgggacgaaccgctccatgatc
atcgacaaagagatctactggcccaacggcctgaccctggactacagcctggagaagctg
tactgggccgacgccaagcacaacttcatccaccgctccaacctggacggctcctccagg
gaggtggtggtcaaaggggagctgcctcacccattcgcgctcacgctgtacgaggacacg
ctgttctggaccgactggaacacgcactccatccactcctgcaggaagcagaccggcggc
gagcagcgcgtcgtccactcggacatcttctccccgatggacatccacgtgttcagcgct
aagagacaagacatattggtcccatgtccctgctccgtggacaatggcggctgctcccac
ctgtgcctgctgtcccccatgaagcccttctaccagtgtgcctgccccaccggagtccag
ctgctggaggacgggaggacctgcagagacggtgcgacccagatgctgctgctggcccgg
cggaccgacctgcgccgcatctctctggacatgccggacttcacagatgtggtcctgcag
ctagacgacgtgcggcacgccatcgccatcgactacgacccggtggacgggttcgtgtac
tggacggacgacgacgtgaaggcggtgcggcgcgcgcgcctggacggcagcgaggccgag
ttcctggtcacgttgcaggtcaaccaccccgacggcgtggccgtggactggatcgcccgg
aacctgtactggaccgacactggcactgaccgcatcgaggtgacccggctcaacggcacc
atgaggaagatcctgatctctgaagacctggacgagcccagggccattgtgctggacccc
gtggccggttacatgtactggaccgactggggggaggagcctaagatcgagcgggccgac
ctggacggactggagcggctggttctggtcaacacatctctgggctggcctaacggactc
gccctggactatgaggaccgccggctgtactggggggacgccaagaccgacaagatcgag
gtgatggacatggacgggacgggccgccgcgtgctggtggaggacaagctgcctcacatc
ttcgggttcacgctgctgggagacttcatctactggacggactggcagcgccgcagcatc
gagcgcgtgcacaagcgcacggcggagcgccagttcatcatcgaccagctgcccgacctc
atgggcctcaaggccgcctacgtgcaccaggccgtcggtacaaacccgtgtgccgacagc
aacggcggctgcagccacctgtgcctgtacaagccgcgcggcgtgcagtgcggctgcccc
atcggcctggagctggtggccgacatgcgcacctgcatcgtgcccgaggcctttctgctc
ttctcccggcacaccgacatccgccgcatctccctggagaccaacaacaacaacgtggcc
atcccgctcaccggcgtcaaggaggcctcggcgctcgacttcgacgtcacagacaaccgg
atctactggaccgacatcaccctgaagaccatcagccgggccttcatgaacggcagcgcc
ctggagcacgtggtggagttcggtctggactacccggagggcatggcggtggactggctg
ggcaagaacctgtactgggccgacaccggcaccaaccgcatcgaggtggccaagctggac
gggcagcaccggcaggtcctggtctggaaggacctggacagcccgcgagcgctggctctg
gacccggctgaagggtacatgtactggaccgagtggggcgggaagccaaagatcgaccgc
gcggcgatggacgggacgggtcgcatcacgctggtagccgacgtgggccgagccaacggc
ctcaccatcgactacgcggagcggcgcctctactggaccgacctggacaccacgctcatc
gagtcctccaacatgctgggtcaggaccgcgaggtgatagcggacgacctgccgcacccc
ttcggcctcacccagtaccaggactacatctactggaccgactggagccagcgcagcatc
gagcgcgccaacaagaccagcggccagaaccgcactgtgatccagggccacctggactac
gtcatggacatcttagtgttccactcgtcccggcaggccggctggaacgcctgcgccgcc
accaacgggcactgctcgcacctgtgcctcgccgtgcccgtcagcagcttcgtgtgcgga
tgccccgcccacttctccctgaactacgacaacaagacctgcagcgctccaacctccttt
ctgctgttcagccagaagtcggccattaaccgcatggtgatggacgagcagcagagcccc
gacatcacgctgcccatccacagcctgcgcagcgtgcgggcgctggactacgacccgctg
gaccgccagctgtactggatcgactccaagcagaacctcatccgccgcgcgcaggaggac
gggaaccagagcatgacggtggtctcgggcttgctgggcgggccgggtcagggcctgcag
ctgtacgacctgagcatcgacatctacagccgcttcatctactggaccagcgaggtcacc
aacgtcatcaacgtcaccagaaccgacggcagccgggtcggcgtggtgctgaggggcgac
cacgacaagccccgcgccattgtggtcaacccggagagagggtacatgtacttcaccaac
ctgctggagcgctccccgaagattgagcgcgcggcgctggacgggacggagcgggaggtt
ctgttcttcagcgggctggggaagcccgtggcgctggccatcgacaacgcgctggggaag
ctgttctgggtggactcggacctgcggcgcatcgagagcagcgacctgtccggagccaac
cgcatcgtcatggccgactccaacatcctgcagcccgtgggcctcaccgtgttcggcagc
cacctgtactggatcgacaagcagcagcagatgatcgagcgcatcgacaagaccaccagg
gagggacgcaccaagatccaggcccgcatcgcctacctgagcgacatccacgccgtgcac
gagctcgacatgagggagtacggtaaacatccgtgtacctgggataacggcggctgctct
cacatctgcatcgtgaaaggcgacggaacgactcgctgctcgtgtcccgtccacctggtg
ctgctgcaggacgagctgtcctgtggagagccgcccacctgctccccggagcagttctcg
tgcagctcaggtgaggtggactgcatccctcaggcctggagatgcgacggcttcgccgag
tgcgacgacagcagcgacgaggaggcgtgtcctgtgtgctcgccggaggagttccagtgc
gacagccggcagtgtgtgagcctcagcatgcgctgcaacggggaggtcaactgccaggac
cggtccgacgagagcaagtgtgaagtgcgctgccctccggaccagttcagctgctctaat
ggtcagtgcatcgggaagcacaagaagtgcgaccacaacacggactgcacggacaactct
gacgagctcggctgctacccgacggaggagccgccgcccccctccaacaacaccatcggg
tccatcgtgggcgtggtcatggctctgttcgtggtgggcgccgtgtacttcgtgtgccag
cgcgtcctctgccctcagatgaaggacgacggcgagacggtggccaacgacttcgtggtc
cacgggccgtcctcggtgccgctcggctacgtgccgcatccgagctcgctgtccagctcg
ctgccgggcatgtccaggggcaagtccgtgattggctccctcagcatcgtgggcgggagc
agcgggccgccgtacgaccgcgcccacgtgaccggggcgtcgtccagcagctcgtccagc
accaaagggacctacttccccccgatcctgaaccctcctccgtctccggctacagttcgc
tctcagtacaccgccgagttcggttattcctccaacagcccctcaacgcaccgctcctac
agctaccggccctacacctaccgccactttgccccgcccaccaccccctgcagcaccgac
gtgtgcgacagcgactacacgccgggccgccgggcgccgctgaagtccggcgccgctaag
ggctacgccagcgacctcaactacgactcggagccgttcccgccgccgccgacgccgcgc
agccagtacctgtcggcggaggagaactgcgagagctgcccgccgtcgccgtacaccgag
cgcagctacgcccaccacctgtacccgccgccgccctcgccctgcacggactcctcctga
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