KEGG   Clinocottus analis (woolly sculpin): 137791404
Entry
137791404         CDS       T10471                                 
Name
(RefSeq) synaptopodin
  KO
K21112  synaptopodin
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cana00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    137791404
SSDB
Motif
Pfam: Calsarcin
Other DBs
NCBI-GeneID: 137791404
NCBI-ProteinID: XP_068442430
LinkDB
Position
Unknown
AA seq 1111 aa
MEMEKGHTSIRRGVSWSPGGLRKPLQATHNTHTPGTECNASWETTGFNKEQMSRKTNLTR
SASLSEKELKEARVRSQIIAAQLTVPSNSSSRGVQLFNRRKQRVSAFTLESCGEGSGTDR
AKNVKTDPSSNKLTWAERSTEEKDRDLNFKNSSTKPLSSSPGRVHSGGDIIEESGQDFQR
GDYMEDIVIQERHFLPVKEEQEEEEEAGDKIHEDKVKDEIPPGSNNSDPVLMRHDEEEAD
THMGHTGSAPPGKLHNGCQSTSGTERVSVPTSKQTNTIINRTARPFFSPLTVQSPEAASP
VMEIPPPPSYATPPLPAISAPQPLAFSPPPPPPSYPTPPLPAFTNQPPQTYYSSPPPMSP
FMPPSFNTPPQFPMSSVSQYPPMPHYGPPTAPRPSTFVPQPAGERKPITQIKTGILEEGA
ARRGNRKSMFTFKEKTVVAPNPELLSLVQGVDERKKHGHRSVPEPASEEELLALGAEASN
FLAKEEDRAEDARAPEWASCLKTSRTRPKEEHQPEQTLTNVSGKGAELFAKRQSRMEKYV
VEKQNAGQIRSPSPTMSLPPSWVYPSNMPGRVKAIAKNSDMSAQLSQNLKAQQAVKQKPR
QKAAAPEPIPEAPPLENGCTQIEMDLSRHKPYQLSSSLFVLNPVKDPISTLPRAAPLSKN
LISSQSFSRKASLPSNPPHFSGQPMSPQLPLSPRRGAEYRPDSACVEPRTSSSMAAFSPE
RVSSPRSGVQAPRPTFSAKKAGIAPQTPKDSFPVETPSETATPTRTPSLTRRFSSPEGPA
AGTWTPSLQTNRPSTTIFSRSVTSPVSSSRGTRCQSPKASQNIHLSTVTSTTTSRPSHTS
TATSPRSPPWGSRCQSPMVSQNTQPSSISSNPGFRPSQTSTTTSPRSPPWGSRCQSPMVS
QHTQSSTISFVPTSRPTQTSTATSPVSPPWGSRSQSPAFSQTSLSFQATKPLYTSSVTSP
VPPPKDSRCMSPIGNNPDSKANHRLLAKNIINAAKRKNSPSPGALSGHSFPISPLGNSHQ
GYDCHKPPISPFQSRAFGAQSPTFTSPPPTPTQRICSPVRLYNTRSLTDSDASVESEDSG
LRSPGSHSYNTCPRGWGSSLRVKRSTVSTDL
NT seq 3336 nt   +upstreamnt  +downstreamnt
atggaaatggagaagggacatacgtctatcaggaggggcgtgagctggagtccgggagga
ttgagaaaaccacttcaggcaacacacaacacacacactcctgggacagagtgcaatgca
tcatgggaaacgacaggattcaacaaagaacagatgagccgaaaaacaaatctgaccagg
agtgccagtttatcagagaaggagctgaaggaggctcgtgtcaggagtcagatcatcgct
gctcagctcaccgtcccgtccaactccagctccagaggcgtgcagctcttcaaccggcga
aaacagagggtcagcgccttcacgctcgaaagctgtggagaggggtcagggacggacaga
gctaagaatgtaaaaacagacccttcatctaacaaactaacatgggcagagaggagcact
gaggaaaaggacagagacctgaactttaagaacagctctactaagccactctcgtcgtca
cctgggagggtccactcaggaggtgatatcatagaagaatcaggtcaggattttcagagg
ggagactacatggaagacattgttatccaagagagacatttcctccctgtcaaggaggag
caggaggaagaggaagaggcaggagataaaatccatgaggacaaagtcaaggatgagatt
ccccctggaagtaataatagtgatccagttctgatgaggcatgatgaagaggaggcagac
actcatatgggccacacagggtcagctccccctggaaagcttcataatggctgccagagt
acctctggaactgagagggtgtctgtgcccacatccaagcagacaaacaccatcatcaat
cgaactgccaggccctttttctcgccgctgacagtgcagtccccagaggcggccagccct
gtcatggaaattccccctcctccatcctatgccactcctcctctccctgctatctctgcc
cctcaaccattggcattctcacctccacctccgcctccgtcatatcccacacctcctcta
ccggcctttacaaaccaacctccgcagacctactactccagtccacctccgatgtcccct
tttatgcctccttcctttaatacaccaccccagttcccgatgtcttctgtgtctcagtac
ccacccatgccccattatggccctcccacagccccaaggccttccacttttgttcctcag
cctgctggagagaggaagccgataacacaaatcaaaacaggaatacttgaggagggtgct
gcgagaagggggaataggaagtcaatgttcacattcaaagagaagacagttgtcgcgccg
aaccctgagctgctctctctggtgcaaggggtggatgaaaggaagaaacatggacataga
tctgtgcccgagccggcatcggaagaggagttgctggcgctgggggcagaggcctccaac
ttcctcgccaaggaagaggacagagccgaggatgcaagagctccagagtgggcttcttgc
ctgaagacctccaggacccgtccaaaggaagagcaccagccagagcagaccctcaccaat
gtatcaggaaagggggctgagctatttgccaagcgtcagtccaggatggagaaatacgtc
gttgagaagcaaaatgcaggacaaattaggtctccttctcccacgatgtctctgccacca
tcttgggtgtacccatcaaacatgcccggcagggtcaaggctattgctaaaaactctgac
atgagtgctcagctttcacaaaacctaaaggcccaacaagcagtcaagcaaaaaccaaga
caaaaagctgcagcaccagagccaattccagaggcccctcctttagaaaatggttgcacc
cagatagagatggatctgtcaaggcacaagccctaccagctttcctcttctctctttgtc
ctcaacccagtcaaggaccccattagtaccctacccagagcagcacccctgtccaagaac
ctgatatcttcccagtctttctctcgaaaggcttctttacccagtaaccctcctcacttc
agtggccaacctatgtcgccacagctgcctctcagccccagaagaggagcggaatatcgg
ccagattcagcctgcgtggagccgagaaccagctcttctatggcggctttttctccagag
cgagtgtcctctcctcggtcaggggtccaggcgccaaggccaacgttttctgccaagaag
gcagggattgcgccacagacaccaaaagattccttcccagtggaaacgcccagtgagacg
gccacgccaaccaggacgcccagcctcaccagacgtttcagcagcccggagggccccgcc
gccgggacctggactcccagcctccaaactaatcggccctccaccaccatctttagccgc
tcagttacttcccctgtatcctcttccaggggtacaagatgccaatcccctaaggccagt
cagaatatccatttatccacagttacctccactacaacatctagaccctctcacacatct
acagccacctctccacgctctcctccctggggttcaagatgtcaatccccgatggtgagc
cagaatacccagccctccagcatctcctccaatcctggttttagaccatcccaaacgtct
acgactacttccccgcgttctcctccttggggttcaagatgccagtccccaatggtaagc
caacatacccagtcttccaccatttcttttgttcctacttccagaccaacccaaacatct
acagccacatctcctgtctctcctccttggggctcacgttcccagtctcctgccttctct
cagaccagtttatccttccaggctactaaacctctgtacacatcctctgtcacctctcct
gttcccccacccaaagacagtcgctgcatgtcccctattggtaataacccagactctaaa
gccaaccaccgcctcctggctaagaacatcatcaatgcagccaaacgtaaaaacagcccc
tcccctggcgcactgagcggtcacagcttccccatctcacctttgggaaattcccaccaa
ggctacgactgtcacaaaccacccattagcccgttccagtcgcgggcatttggtgcccag
tcccctacattcaccagccctcctccaaccccaacgcagaggatctgctcccctgtgagg
ctctacaacactcgctccctcacagactctgatgcctctgttgagtcggaagactcaggc
cttcgatcgcctggctcgcactcctacaacacctgtccccgcggctggggcagtagcctg
agggtgaagagaagcaccgtctccacagacctgtga

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