Clinocottus analis (woolly sculpin): 137791409
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Entry
137791409 CDS
T10471
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137791409 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137791409 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
SKA1
Motif
Other DBs
NCBI-GeneID:
137791409
NCBI-ProteinID:
XP_068442432
LinkDB
All DBs
Position
Unknown
AA seq
1781 aa
AA seq
DB search
MSLIILFVASLALWRPVGAQQLPGFPDVCTEGSCYPATGDLLIGRAHKLSVSSTCGLKQP
ERFCIVGHLEEEKKCFVCDSRRMFDDDLNQVSHSIDNLVTTFAPNRLKTWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKNWQVYRYFAYDCEASFPGVSSGP
MAKVDEIICDSHYSDIEPSTEGEVIFRVLDPVFSIDDPYSLRIQNMLKITNLRVKFLKLH
TLGDNLLDSREEVTEKYYYSLYDMVVRGNCFCYGHASECAPIDGAPSGAEGMVHGRCVCN
HNTKGLNCEHCQDFYHDLPWKPAEGRNSHACKKCECNQHSTSCHFDAAVYVTTGNMSGGV
CDDCRHNTMGRQCEQCAPFYHQHPNRDLRDPNVCEPCSCDPAGSLQGGLCDSHTNVAAGL
ISGQCRCKANVEGERCDHCRRGHHGLGQGPHGCLPCTCNPLGTLSGGSSCDSDTGRCFCK
RLVDGNNCDECLPQHWGLSNDMDGCRACDCDQGGAVDNNCDPHSGQCVCREHMFGRRCDR
VESGFYFITLDHYTYEAEDAKHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTIT
DVPESMDYDVLIRYEPQLPEQWEQVNIRVQRPVFNPPNYSAHCGNSVQSGDEQSISLPPG
SRHVLLVRPVCFEQGLNYTIRLTLPLYSSVSDVQSPYTLIDSLVLIPRVRELDMFHGVDG
EGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAMACQCDPQGSLSAVCEP
SGGQCRCRPNVVGRNCDHCAAGTFMFSPAGCRPCGCDPLGSVSAFCHEATGQCECVPGAA
GRQCSHCLPGFWGFPQCRPCQCNGHSEHCSPQTGECQGCRDFTAGHHCERCQGGYHGDPE
LGSGGHCRPCMCPDGPRSGRQFSDSCYLLAASNQMVCVCSPGYKGARCDACSPGYFGNPL
VPGGRCLPCQCNGNIDMQDPASCDAQTGACLKCLYHAEGYGCQHCKPGYYGDAATQSCRK
CMCDPVGTAPRACSSPDECRCDRRDGRCPCLPNVVGQNCDACAADTWNISGGNGCRRCDC
DPVHSFGSSCDAITGQCLCRPGFGGKTCRECRELFWGDPEVKCHACDCDSRGTSSDQCHR
ATGQCTCAEGVSGPRCDTCARGYQGEFPTCEPCHRCFAVWDAVVGELTNQTRRLDAQVTQ
LQTSGVTAPYKDVVGSLERNIKAVREILESNAAAVKLEQIQELMQQITGVMSFLNGKLNT
TEETLELLHGDANATDADLDALMDEANRLELSVQELRRQVHNAKNANIQGAMATIAAAHM
ESMTAELRANASTSVPGSVVEASAAVRKATEDKLSGGQKEFDRKHQRNSQKLDKLSSELD
AFDLSPLSEKTCGGAADGAGCSGSPCGGLGCVGEDAAPRCGGEGCGGLAATSQTALTSAK
DLDREISAASQEVDELSRKVWEAGNRANKAKVNALEVLVKSNRSKERVEQSNQQLRQLIK
DIRDLLTNDKAEVSVIEAVANEVLALEMPTSTQKLQLLTEEIREKVEALTSVESILSQSA
EDIQAAETLLEHAKAASVEATTLKEAADVVKTALEETERAQSIAIDAIQLAQNNTKGTLE
LLLSVESETAMSELKLGNTTGRLVQLEREVGLLRQNNLEVNRLAESADWITDQARLNAEE
AQQEFDTEVKDRLVDVEDLVEDKGESVLQARRRADQLQQEAKELLAQSGVKLQRLAELEG
SYEDNQRILEDKAAELAELERAVRRVLEEISYKVTLYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcataatcctcttcgtcgcatctctggccctgtggcggcccgtcggggcgcag
cagctgccggggttcccggacgtctgcaccgagggcagctgctacccggccacaggtgac
ctgctcatcggccgcgcacacaagctctccgtgtcctccacctgcggcctgaagcagccc
gagcgcttctgcatcgtcggacatctggaggaggagaagaaatgcttcgtgtgcgactcc
aggcggatgttcgacgatgacctcaaccaagtcagccacagcatcgacaacctggtcacc
accttcgcccccaaccgcctcaagacctggtggcagtcggagaacggcgtggagaatgtg
accatccagctcgacctggaggccgagttccacttcacacaccttatcatgacgtttaag
acgtttcgtccggctgccatggtgatcgagcggtccatggactttgggaagaattggcag
gtttatcgttacttcgcctacgactgcgaggcgtccttccccggcgtttcctccgggccg
atggccaaagtggacgagatcatctgcgactcccactactcggacatcgaaccgtccaca
gagggagaggtgatatttcgggtgctggaccccgtcttctcgattgacgacccctacagc
ctgaggatacagaacatgctgaagatcaccaacctgcgggtgaagttcttgaagctccac
acgttgggcgacaacctgctggactcgcgcgaggaggtgacggagaagtactactactcg
ctctacgacatggtggtgcgcggcaactgcttctgctacggccacgcctccgagtgcgcg
cccatcgacggggcgccgagtggcgccgagggcatggtccatggccgctgtgtgtgtaat
cacaacacaaagggactaaactgtgagcactgccaggacttctaccacgacttgccgtgg
aaacccgctgagggccgaaacagccacgcctgcaagaagtgcgagtgcaaccagcactcc
acgtcgtgccacttcgacgcggccgtgtacgtgacgaccggcaacatgagcggcggcgtg
tgcgacgactgtcgccacaacacgatgggccggcagtgcgagcagtgcgcgcccttctac
caccagcaccccaaccgcgacctgagggaccccaacgtctgcgagccgtgtagctgtgac
ccggccgggtctctgcagggcgggctgtgcgactcgcacaccaacgtggcggccggtctg
atctcgggtcagtgccgatgcaaagccaacgtggagggcgagcgctgcgaccactgcagg
cggggacaccacggcctgggacaggggccccacggctgcctgccttgcacttgcaacccg
ctgggcactctgtctggaggaagctcctgtgattcggacacaggaaggtgcttctgcaag
cgcctcgttgacggaaacaactgcgatgagtgtctgccgcagcactggggtctgtccaat
gacatggacggctgcagagcatgtgactgtgatcagggcggcgctgtcgacaataactgt
gaccctcactcgggtcagtgtgtgtgcagagagcacatgtttggaagacgctgcgatcga
gtggagtccggcttctacttcatcaccttggaccactacacctacgaggcagaggacgcc
aagcacggacctggcgtgaccgtggtgccgaggccgtaccctctggaccgcagccccacc
tggaccggcatgggctttgtgaatgtcccagaaggagcctacttagagttcaccatcacc
gacgtcccagagtccatggactacgacgtgcttattcgctatgagccgcagctgccagag
cagtgggagcaggtgaacatccgagtgcagcgtcccgtcttcaaccctccaaactactcc
gctcactgcggcaactccgtccagagcggagacgaacagtccatctctctgccacccggg
tccagacatgtgctgctggtgaggccggtgtgtttcgagcagggcctgaactacaccatc
cgcctcacgctgcctctctactcgtccgtcagtgacgtgcagagcccgtacacgctcatc
gactccttggtgctgatcccccgggtcagggagctggacatgttccatggggtcgacggg
gagggagcgtgggatacgttccagcgctaccggtgtctggagagcagccagagcgtcgtg
aaaagccccctgaccgacatctgcaacgactacatcttcagcgtctccgctctgctgcac
aaaggagccatggcatgccagtgtgaccctcagggttccctcagcgccgtgtgcgagccc
agcggcggtcagtgccggtgtcgccccaacgtcgtgggcaggaactgtgaccactgcgcc
gccggcaccttcatgttcagcccggccggctgcagaccgtgcggctgcgaccctctgggc
tccgtcagcgccttctgccacgaggcgacgggccagtgcgagtgcgtcccgggggccgcc
gggcgccagtgttcccactgcctgccgggcttctggggcttcccccagtgccggccgtgc
cagtgcaacgggcacagcgagcactgcagcccgcagaccggcgagtgccagggctgcagg
gacttcaccgccgggcaccactgtgagcggtgtcagggcggttaccacggggacccggag
ctgggctcagggggacactgccggccctgcatgtgtcctgacgggccgcgcagcgggagg
cagttctctgacagctgctacctgctggctgccagcaaccagatggtgtgtgtgtgcagc
ccgggctacaaaggtgccaggtgtgacgcgtgttctcccgggtacttcgggaaccccctg
gtgcccggcggccgctgcctgccctgccagtgcaacggcaacatcgacatgcaggacccg
gcgtcctgcgacgcgcagacgggcgcctgcctcaagtgcctgtaccacgccgaggggtac
gggtgtcagcactgcaaacccggttactacggcgacgcggccacgcagagctgcaggaag
tgcatgtgtgacccggtgggcacggcgccgcgggcctgctcgtccccggacgagtgccgc
tgtgaccggcgcgacggccgctgtccctgcctgcccaacgtggtcggccagaactgcgac
gcctgcgccgccgacacctggaacatctccggcgggaacggctgccggcgctgcgactgc
gaccccgtccactccttcggatcgtcctgcgacgcgatcacgggacagtgtttgtgcaga
cccggttttggcggcaagacgtgtcgggaatgcagagagctcttctggggggatccggag
gtcaaatgtcacgcttgtgactgcgactctcggggcacctccagcgaccagtgccaccgg
gccaccgggcagtgcacctgcgcggagggcgtgtccgggccgcgctgcgacacctgtgcg
aggggctaccagggggagttccccacctgcgagccctgccaccggtgcttcgccgtctgg
gacgcggtcgtcggcgagctgaccaatcagacgcgccgcctggacgcccaggtgacgcag
ctccagaccagcggggtgacggcgccctacaaagacgtggtcggcagcctggagaggaac
atcaaagcggtccgggaaatattagagagcaacgcggcggcggtgaagctggagcagatc
caggagctgatgcagcagatcaccggcgtgatgtccttcctgaacggaaagctgaacacc
acggaggagaccctggagcttctgcacggcgacgccaacgccaccgacgccgacttggac
gcgctgatggacgaggccaaccggctggagctgagcgtccaggagctgaggcggcaggtg
cacaacgccaagaacgccaacatccagggtgccatggccaccattgcagctgcacacatg
gagtccatgacggctgagctccgcgccaacgcctccaccagcgtccccgggagcgtcgtg
gaggcgtcggccgcggtacggaaagccacggaggacaaactgagcggcggccagaaggag
ttcgaccgcaagcaccaaagaaactctcagaagctggacaagctgtccagcgagctggac
gccttcgacctgtcgccacttagcgagaagacgtgtggcggcgccgccgatggcgccggc
tgctccggttccccctgcgggggtctgggttgcgtcggcgaggacgcggctccgcggtgc
ggcggagaaggatgcggaggcctcgccgcgacgtcccaaaccgctctcacatccgccaaa
gacctggaccgggagatcagcgcggcgagtcaggaagtggacgagctctccaggaaggtt
tgggaagccggcaaccgcgccaacaaggccaaggtgaacgctctagaggtgctggtcaag
tccaaccggagcaaagagagagtggagcagagcaaccagcaactccggcaactcatcaaa
gacatacgggacctgctcaccaacgacaaggcggaggtgtctgtgatcgaggccgtggcc
aacgaggtgctggccctggagatgccgacctccacccagaagctgcagctgctcaccgag
gagatccgggagaaggtggaggcgctcaccagcgtggagtccatcctcagccagagcgcc
gaggacatccaggctgcggagacgctgctggaacacgccaaggccgccagtgtggaggcg
accaccttgaaggaggcggcggacgtggtgaagaccgccctggaggagaccgagcgagct
cagagcatcgccatcgacgccatccagctggcccagaacaacacgaagggcacgctggag
ctgctgctctctgtggagtcggagacggccatgtcggagctgaagctcggcaacaccacg
ggccgcctggtgcagctggagcgggaggtcggcctgctgaggcagaacaacctggaggtc
aaccggctggcggagtcggccgactggatcaccgaccaggccaggctgaacgcagaggag
gcccagcaggagtttgacacggaggtgaaggacagattggtggatgtcgaggacctggtg
gaggacaaaggggagtcggtgctgcaggcgaggaggagagcggaccaactgcagcaggaa
gccaaagagctgctcgctcagagcggcgttaagctgcagaggctcgcagagttggaaggt
tcctacgaggacaaccagcgcatcctggaggacaaagctgcagagctggcggagctggag
cgagccgtccgccgggtcctggaggagatcagctacaaggtgacgctgtacagcacctgt
ctgtga
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integrated database retrieval system