Clinocottus analis (woolly sculpin): 137791610
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Entry
137791610 CDS
T10471
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137791610 (ppfibp1a)
Membrane trafficking [BR:
cana04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
137791610 (ppfibp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
137791610
NCBI-ProteinID:
XP_068442788
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKAMDYSNGLFDCQSPTSPFLGGLRVLHLLEDLRGVLE
LMDIEERDNLRCQIPDSTADGLAEWLQGRLTNGHGPEAVYQERLSRLESDKECLVLQVSV
LTDQVEVQGEKIRDLDNCLDLHQQKLNATEELLQQELLNRSTLETQKLELLAEVSSLRLK
LTAVDRDHRDSEGLHQEVTDLRFRVTDIENERLQCEKKLKATKEELQLLQRQLEEREEDL
RRLKDDSRLRVESHSRAEGGERDTEVLKMKMVLESLASANDVKERRIKELEESLTKCKKG
PEQVKEKFNEDDYEDIPDDPSVSVSMEVDPVTPALEGEAGRSSGESIPCIAVLSEMNELD
REQQLQAAGSSFDVPQPGSTDQSNNKAGPGSLSPSRANEGSFGTKKARSSFGRGFFKLRG
GKQTTSSPNLDRTRSTSAPALAEMERKGTDHLDLAGAPPRKSHDGSLLPSSPETKKKSKG
FRKFFGRLKRSHSSSFNDEADVEFRRGGVRATAGPRLGWSRESKHNVVEVPFSRWSRDEV
CAWLHQQGLGLYIPQGQSWIKSGQTLLRASQHDLEKELCMKHPLHRKKLQLALQALGSDE
DDLKGRLDHNWVTRWLDDIGLPQYKSHFDEARVDGCMLHYMTVEDLLSLKVGSVLHHLSI
KRAIQVLRLNCYEPNCLRRRPSDENNMTPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSG
VHGGLMVLEPRFNVEALALLLNIPPSKTLLRRHLATHFHLLIGSEAQRLKQDCLENPDYI
VLSATAKVKPRRLSFGGFGTLRKKRHDDGDEYVCPMNVEMPKSSSFQTGARIYEEHLDHL
EQMEDSEGTVRQIGAFSEEINNLTSMLTEDESFQEISVDAAETDHNSGV
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgacgccagcgatatgttagcagcagccttggagcaaatggatggcatcata
gcaggctccaaggccatggactactccaacgggctgtttgactgccagtcgcccacctct
cctttcttggggggcctccgggtgctgcacctgctggaggaccttcggggcgtgctggag
ctcatggacatcgaggagagggacaacctgcggtgccagatccccgattccactgcagac
gggctggcagagtggctgcaggggcgattgactaacggccacggcccagaagcagtctac
caagaacgcctgtcgcggctggagagcgacaaagagtgtcttgttctgcaggtaagcgtt
ctcacagaccaggtagaggtgcaaggtgaaaagattcgggacctggacaactgcctggat
ctccatcagcagaaactaaatgctactgaggagttgctgcaacaggagctgttgaaccgg
agcacactggagacccagaagctggagctgctggccgaggtgtccagtctgaggctgaag
ctgacggccgtggacagagaccaccgagacagtgagggcttgcaccaggaagtaacagac
ctgcggttcagggtgactgacatagagaatgaaagactgcagtgtgagaagaaactcaaa
gctaccaaagaggagctgcagcttctgcagaggcagctggaggagcgggaggaggacctg
aggaggctgaaggacgacagcaggctgagggtggagagccacagcagagccgagggagga
gagagagatacagaagtgttgaagatgaagatggtgttggagtcactggcgtcggccaac
gacgtgaaggaacgacggataaaggagctggaggagtcgctcactaagtgcaagaaaggg
ccggagcaggtcaaagagaagtttaacgaagacgactatgaagacatcccagatgatccc
tcggtctccgtgtccatggaggtggatccggtcacaccggcgctggaaggggaggcagga
agaagctctggcgagtctattccatgtatagcggtgctctctgaaatgaacgagctggac
agagaacagcagttacaggcggccggaagttcgtttgacgtcccacagccgggcagcacc
gaccagtccaacaataaagcaggacccggatcattgtctccttccagagcaaatgaaggg
agctttgggaccaagaaggcccgttcctccttcggccgaggcttcttcaagctgcgtgga
ggcaagcagacaaccagctctccgaacctggaccgcacccggagtaccagtgcacctgcg
ttagctgagatggaacgtaaaggcacagatcacctggacttggccggtgctcctccgcga
aaatctcacgacggatctcttctgccgtcctcgcccgaaaccaaaaagaagtccaaaggc
ttcaggaaattctttggcagactcaagaggagccactccagctccttcaacgatgaagcg
gacgtggagttcaggaggggaggagtcagagccacggccgggccgcgcctcggctggtcg
cgggaatccaaacacaacgtggtcgaagttcccttctcgcggtggagtagagatgaagtc
tgcgcgtggctgcaccagcagggcctcgggctgtacatccctcaggggcagagctggatc
aaatcggggcagacgctactgagggcatcgcagcatgatctggagaaggagttgtgcatg
aagcaccctctccacaggaagaagctgcagctggctctgcaggctctcggctcggatgag
gacgacctgaagggcagactggaccacaactgggtgacccggtggctggatgacatcggc
ctcccgcagtacaaaagccactttgacgaggctcgtgttgatggatgcatgctgcactac
atgacggtggaggacttgctctctctgaaggtgggcagtgttctccatcacctcagcatc
aagagggccattcaggtcctccgcctcaactgctacgaacccaactgcctccgacgacga
ccctctgatgagaacaacatgacaccagcggagatctcccagtggaccaaccaccgagtg
atggagtggctgcgctctgtggatttggcagaatacgctcccaatctgaggggcagcggc
gttcacggagggctgatggtgttggagccgcgcttcaacgtggaagcgctcgccctcctg
ctcaacatccctcccagcaaaaccctgctgaggcgccacctggccacacacttccacctg
ctcatcggctccgaggcgcagcggctcaagcaggactgtctggaaaaccccgactacatc
gtgctcagcgccaccgccaaggtcaagccgaggcgcctgtcattcgggggttttggcact
ttgaggaagaaacgccacgacgacggcgacgagtacgtctgccccatgaacgtggaaatg
cccaagagcagcagcttccagacgggcgcccggatctacgaggagcacctcgaccacctg
gagcagatggaagactccgaagggaccgtgagacagatcggagcgttttcggaggaaatc
aacaatctaacgagcatgctgacggaagatgagtcttttcaggagatttccgtcgacgcg
gcagaaaccgaccacaactctggtgtttga
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