Clinocottus analis (woolly sculpin): 137791958
Help
Entry
137791958 CDS
T10471
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137791958
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137791958
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
SALM family
137791958
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
137791958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
fn3
Ig_2
LRR_9
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
137791958
NCBI-ProteinID:
XP_068443277
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MPVPPFFNPCRQKHLPHADLHPEQRAERSTSPSLFPPSILSLSLLPPLLVSSLPSSSHLV
HCACPRATKRTLPEPVPFPAFHWLTLVTCCLLPSLIGAGETWGMVSACPFHCVCRNLSEA
LSTLCADKGLLFVPSHVDRRTVELRLADNFITEVGGIDFVNMSGLVDLTLSRNTINLIRP
MTFGDLESLRSLHLDGNRLTILGPRDLAGLINLQHLIINNNQLVKVAVQAFDDFLDTLED
LDMSYNNLRRVPWESIQNMASLHTLNLDHNLIDHIAEGVFGELYKLARLDMTSNRLRTLP
PDPLFARSQTGAISPTPYNAVISLNFGGNPLHCNCELLWLRRLIRGDDMETCATPPHLAA
RYFWSIPEEEFTCEPPLITRHTHKLWVLEGQQATLKCRAIGDPEPVIHWVSPDDRIVANS
SRTSSFSNGTLDILVTVARDDGAYTCIAINAAGEATATVDLKIIPLPHRGGAGGNTGNNN
ANPKHNRNVTNGILRTDPGSSDISTGKNGGINNGAGRGGEAEDGRRAVEGEEDDSGRADE
GERADGGSMEDDEGDEEEARMVGVQSVTSTSAQVRWDLGLLSTAYVVWMYQIQYNCTADE
TLIYRILPSTSDRFLLKNLVAGVDYNLCVLAIFDDTITSLAATKVLGCATFSTKDVYPAC
RSLQAHFLGGTLTILVGGVVVVTLLVFTVALMVRHRVCNHGDHMICHNGNTEAGGGACCQ
SGGGGDKGGNGSGCYQSNGAGDMMMVVLPNGLSSKRGGEKETDKDKDKEKDEADPASSLP
PKLPPKPRPKPKVNLEQFLSAGGVVSTTTGAGCEMALVVRQRKLEKMFPYAPESDRTPLY
YTPSSTLPRQSHSRPRPRLERELTNRASFSLAAPLGDPELLDWRITSRGRDRWNSSQAYQ
RPLSPQSPASKTVSKRRHSLDMGSSVALATDAATTVAKRYGAVNYAKRLSVIWTRRSQSL
HGMLVQCASTTSTTSSTTSDEDSAFGPRCEFQRGYIHAYNTTNSNSNTGINTGKASSVKD
RGRQTGKDGRSAEELEESVV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccccccattcttcaatccctgcagacaaaaacacctgccccacgcagacctc
caccccgaacagagggcagaacgctccacttccccctccctcttccctccatccatcctc
tctctctctctcctcccccccctcctcgtctcatctttgccctcctcatcccacctcgtc
cactgcgcgtgcccgagggctacgaaaagaaccctccccgagcccgtccccttcccggcg
tttcactggctgactctggtcacatgctgcctgctgccgtctctgattggagctggggag
acgtggggcatggtgtcggcctgccccttccactgcgtgtgtcgaaacctctccgaggcg
ctcagcacgctttgcgccgacaagggcctcctgtttgtcccctcgcacgtcgaccgccgc
accgtggagctgcggctggccgacaacttcatcacggaagtgggcggcatcgactttgtc
aacatgagcggactggttgatctgaccctgtcgaggaacaccatcaacctgatccgaccg
atgaccttcggcgacctggagagtttgcgctcgctgcatctggatggtaatcgcttgaca
atacttggacccagggacctcgcaggtttgattaatctgcaacacctgatcatcaacaac
aaccagctggtcaaagtcgctgtccaggcgtttgacgacttcctggacacgctggaagac
ctcgacatgtcctacaacaacctccggagggtaccgtgggagtccattcagaacatggcc
agtctgcacactctcaacctggaccataacctgatcgaccacatagcagaaggagtcttt
ggagagctctacaagctcgcgaggctggacatgacctccaaccggctccggactctgcct
cctgatccactatttgcaaggtcccagacaggtgcaataagtcccaccccctacaacgct
gtcataagcctcaatttcggtgggaacccgctgcactgcaattgtgaactgctctggtta
cggaggcttatccgcggggacgacatggagacgtgtgccactccgcctcacttggctgca
agatatttctggtcgattcccgaggaggagttcacctgtgaaccgcctctcatcacacgt
cacactcacaagctgtgggtgctggagggccagcaggccacgctaaaatgccgtgccatt
ggcgaccctgagccagtcatccactgggtttccccagacgaccgcatcgttgcgaattcg
tcccgaaccagctccttcagcaatgggaccttggatatcttggtaacagtggcccgggat
gacggggcgtacacgtgtattgcaataaacgcagcgggtgaagcgacggctaccgtggac
ttgaaaataatccccctgcctcaccggggcggagcaggtggaaacacagggaataacaac
gcgaaccccaaacacaacaggaacgtgaccaatgggattttacggaccgatccgggctcc
tcggatatcagcacggggaaaaacggagggattaacaacggcgccggacgcgggggagag
gcggaggatgggagaagagcggtcgagggcgaggaggacgacagcggcagggccgacgaa
ggggagagggccgacggagggagcatggaggacgacgagggggacgaggaggaagcgagg
atggttggagtacaaagcgtcacgtcaacctcagctcaggtccggtgggatttggggctt
ttgtctacagcttacgtcgtctggatgtatcagatacagtacaactgcaccgccgacgag
acccttatctacagaattctaccgtcgaccagtgaccgcttcctgttgaagaacttggtt
gccggcgtggactataacctgtgtgtgctggccatttttgatgacaccatcacatcgttg
gcggcgacaaaggtgctgggctgcgccacgttctccaccaaggatgtttacccagcttgc
cgctctctccaggcccatttcctgggcgggaccctcaccatattggttggcggcgtcgtg
gtcgtcaccttactcgtgttcactgtggcgctcatggttcgccatcgtgtttgcaatcac
ggcgaccacatgatatgtcacaacggcaacactgaggcgggaggcggggcctgctgtcag
agtggagggggcggggataaagggggaaatggcagcgggtgctaccaatcaaatggcgct
ggggacatgatgatggtggtcctgcccaacggcctgtcgtccaagagaggaggggagaag
gaaacggacaaagacaaggacaaggagaaggatgaagccgatcctgcttcctctttgcct
ccgaaactccctccaaagcctaggcccaagcctaaagtcaacctggagcagtttctttca
gctgggggggtcgtttccacaacgacaggcgccggatgcgagatggcattagttgtgagg
caaagaaagttggagaagatgtttccatacgctcctgaaagtgacagaactcccctctac
tacaccccttcatccaccctaccccgccagtcacactcccgcccgagaccccgtctggag
cgagaactgaccaaccgcgccagtttctctctggcagcacccctgggtgacccggagctg
ctggactggagaatcacctcccgaggaagggacaggtggaactcctcgcaggcctatcag
agacctctatcccctcaaagccctgctagcaagaccgttagtaaacggcggcactcgctg
gatatgggctcctctgtcgccctcgcgaccgacgcagccaccactgtcgccaagcgctac
ggcgccgtcaattacgccaagcggctgagcgtgatctggacgaggcggagccagtccctc
cacgggatgctggtgcagtgcgcctcgacgacgagcacgacgtcttcgacgaccagcgac
gaggatagcgccttcgggccgcgctgcgagttccaacggggatacatccacgcctacaac
accaccaactccaactccaacaccgggatcaatactgggaaagcgagcagtgtcaaagac
agggggaggcaaacggggaaggacggaaggagtgctgaggaactggaggaaagtgttgtg
tag
DBGET
integrated database retrieval system
