Clinocottus analis (woolly sculpin): 137792151
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Entry
137792151 CDS
T10471
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137792151 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137792151 (sf1)
Spliceosome [BR:
cana03041
]
Complex A
Other components
Complex A specific factors
137792151 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
137792151
NCBI-ProteinID:
XP_068443757
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMAAPAPPAAFPSIQAFQPPMPSASFAQ
PLQFNPGAAFPTQAPQQPVVGGGLAKPDFGQKKSRKKSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHS
SSHGGGQRSSGLNNHQQQNRPPWMNSSQNESRNYHSIHGAPSGHGGHHSYPPPMPSMGGP
PMPPNPNGLPPPWMQPPPPPMNQGQGPHGHPMGKSWRFGGGETDGHVAPRGAWTVEEEAM
RETCLLPPPMSMMPPPPPPPSNQPPPPPSGPLPPWQQQAPPPPPTSSMATSTPLPWQQNT
TTTSSPGTGTLPPWQQTQQPAASGAQPPPPMGSPSMVPPPPGVQPPLPPGAPPPPPPPPP
GSTGMMYAPPPPPPPMDPSNFVTMMGMGVPGMPPFGMPPAPPPPPPQN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcgcaaatgcaactcctttagggaagttgcaccctagcattggcgctaaa
cgaggatttgacgctgggcctggtgcggggaacgggttgatggcagcaccagcgccgccc
gcagcctttccgtctatacaagctttccagccaccgatgccaagcgcatcttttgcgcaa
cctcttcagttcaatcctggggcagcttttccgacccaggctccacaacaaccagttgtg
ggcggcggactggccaaaccagatttcggtcagaagaaatcaaggaagaagagtcgctgg
agcagcgagacgcctgatcagaagactgtcataccgggcatgcccactgttattccccct
ggattgacccgggatcaagagagagcctatatagtccaactgcagattgaagacctgact
cgtaaactacgtacaggagacctgggaatccctgttaaccctgaggacagatctccttct
ccggagcccatctacaacagcgagggcaagaggttgaacacacgcgagtatcgcacgcga
aagaagatcgaggaggagcgccactccctcatcacagagatggttggtctcaacccggac
ttcaagcctcctgctgactacaaacctccagccaccagagtcaatgacaaagttatgatc
ccccaagacgaatacccggaaatcaactttgttggtctgctaatcgggccacgtggtaat
acgctgaagaacatagagaaagagtgctgcgccaagatcatgatccgaggtaaaggttct
gtgaaggaggggaaggtaggccgaaaggacggtcagatgctgccgggggaagacgagcct
ctgcatgcgctagtcaccgccaacacaatggagaacgtcaagaaagctgtggagcagatt
cgcaacattctgaagcaaggcattgagacgcccgaggatcagaacgaccttcgaaagatg
cagctgagggagcttgctagactcaacggcacgttgagggaagatgacaacagaatcctc
cgtccatggcagaattctgagccgcgcagcatcactaacaccaccctctgtaccaagtgc
ggtggagctggccacatctcctctgactgcaagtacaccagctcattcgctgcccacaga
gcaacgggcggcgagcctcctcagtcagcccaggacaaggctcggatggacaaggagtat
ctgtccctgatggctgagctaggggaggctccggtccccacatctggtggaggacactcc
agcagccatggaggaggacagcggtcttcaggactcaacaatcaccagcaacagaaccgg
cctccctggatgaactcgagtcagaatgagagcaggaactaccatagcatacacggcgcc
cctagtggccatggaggacaccacagttaccctcccccaatgcccagcatgggaggcccc
ccaatgccccccaaccccaatggcctgccgcccccctggatgcagccccctcctcctccc
atgaaccagggacaaggacctcatggacaccccatgggtaagagctggcgttttggaggt
ggggaaaccgatggtcacgttgctcctcggggggcctggacagttgaagaggaagccatg
agagagacatgtctgttgccacctccaatgagcatgatgccgcctccacctcctcccccc
agcaaccagccccctcctcccccttctggacccctgccaccatggcaacagcaggctcca
ccacctcctccaaccagcagcatggcaaccagtacgccgcttccctggcaacagaatacc
accaccacgtccagccctggcaccggcaccctgccgccatggcagcagacccagcagcct
gcagcctccggagcccagccaccaccccccatggggagcccatctatggtgccgcctccc
cctggcgtccagcccccgttacccccgggtgcccctcctcctccccctccaccgcctcca
ggctcaactggcatgatgtatgccccgccgccgcccccaccacccatggacccttccaac
tttgtcaccatgatggggatgggggtaccaggcatgccccccttcggcatgccccccgca
cctccaccccctccaccccagaattaa
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