Clinocottus analis (woolly sculpin): 137792237
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Entry
137792237 CDS
T10471
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04512
ECM-receptor interaction
Brite
Lectins [BR:
cana04091
]
C-Type lectins
Lecticans
137792237 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137792237
NCBI-ProteinID:
XP_068443909
LinkDB
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Position
Unknown
AA seq
2185 aa
AA seq
DB search
MGSKGQTLAWTWIPVLLLGMTCPSHGSLVKVNKGVKVKRGQTAYLQDSDLQFHIPRQKDA
CKVEVVLNEPITQRVGKVMPQVFDCHYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETY
MEVFSLHVDIMEPECSVIKLGPKSLYVPEFYSFSDVLDGNVVSFHYEQRSSLECTIHLNG
HDTHLPAHGQLVTGEPEKATIRGDEPESFIHLRQQLDNKARAMCKSEDCLKGLKLVKFTK
IPCDDFLLTGLRYQHIDPPSPDVDYITIRLDLKDTRSGSTYQSEQAWIPVHIVGALSNQP
PKPSFMSMFILEVDQFILTPLSTATVDAEDEETPKQLLVFNITKPPVDGFITHLSDHTRP
VSSFTWLDLNDMLIGYQPPNSSNTNRRNYEIEFEVHDFLFEKSPSMTVHMSVRNAETNAP
RVSWNMGLSLLEGQSRPIMWEQLQIVDNDNLNAVRIITVDGLQHGRLTVRGGKGFMFTVK
DIKAGMVRYHHDDSDSTKDFIIFRITDGHHQTRHKFSIKILPKDDSPPVLITNMLLEVSE
GQMALLRGSILQALDMDSSDDYILFNITRPPQAGEVMKMPTSGLTGYPVRHFLQKDLSQS
MVYYRHLGNKVFDDFFEVVLSDFHDPPNLSEPQVVVVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHITRQQLHFVDQESPDNELTYTVTTTPFYAGPHSHSPDAGRLFLVDSIPKFSKDS
NAPVLRLFTQNAVNFMKVAYMPPVMDIGPYPKYIQFVLSVTNLLGKSVTGICFNITLVPV
DNQPPQVITNPLTVEEGGQCQLGPEHLVLSDMDSVEEALHVALQREPQHGTLHLGGLPLK
PDQAFTVQDLKSLKVRYNHDSSETVEDHIEFIATDGSNSVSFILQVKVLAINDEVPVLVP
GLKPVLSCAEGQEIIITAEYIYATDADSNNSSLIFLIARQPYHGVVLRNSIVVDRFIQAD
ITARIISYKHTGLEIGLTPRHDTVTFVISDGETENSALCCGEENPTKTRDVTQLQHSLPV
YDLQITVFPVDSQPPSLTAGHIFTVNEGESAQITASHLKAFDVDTALDKLVVSLISSPQF
GYIENVLPSPGFEKSNTGISIASFSYKDIIDGHVNYVQSRHQRMEPTADQFVFCVSDGKH
SSAHVPFYIIINPINDEIPQFVARNITVREGEMKQLDSSVLHAGDLDVPKDSLLFSVVRA
PQHGSIVSQGSETSASKSQEASPLSPVVDFTMTDLSNGLDLMYMHDDSENMEDSFTIQLS
DGRHQLQRQVMVKVLPVNDEKPHIIRNNGLEVELGEARLISSVALFAQDGDTPSSEVMYI
FDSVPTQGLLQLKERQDWRTLTVGINCTQEMVDMNLLRYVNTRLHGAKTQDFFVFYLSDG
KNQSPPQHFHISVKDLEKGNIAMFVKPLNVSRGDRVVFTTDVLLATDGTEKLEELQYIIT
NPPAHGHVEYIKHTGLAISTFSQMDIAANLVAYVHNNRATTPTETFQFVVSNGKTSRNGS
FVIAVEIVDHILPSLSSNKGLSIPQGSSMILGPDCLVLSDPDTPPSALTFVLLQPPQYGR
LLLGGTTLTAGSNFTQKDIQELEVTYKHDGGASQIDRFAFTASDSTKRGFLLEGQLHTEP
VFFTIQIKPLDKSRPEVVKLLPLWKAEPLGDGRHGIFVSSRELKAQDSDSREEELIFCIV
RQPYFGYLEHMTTGDFVPQRFSQIELNKRTIAYIINPDRESLSDSLEFTVSDSLGNTGPP
HIIQFSWSSIELSQPEYSVCEEQAAISLDLVRKGNLAESSYVTVKVKEVTATAGKDFRTS
PSSLIQFDPGVSTRTWQSEIIQDHLEETVEMFEVLLVSPEGAVIGSINKACVTIRDSGSG
QPRLHQDQEAPLIVGKEVRSDTYPQHGSIQLEKLPLRTESVIWTRGDSISRSGAHVPKKK
LEVMSNPKSIAPSTVFHNGTDIVYTYHGITQMQVKDDTYPSRKSRKANIRVVNRGAQTQV
PAVLTESKSEPHRKISKPQKTALAKEHAKADNTIPKPCVPELMGLLHFNQTTNQLFYCNG
VSWKPWAPTDQMVSAQMCSLDWTFHGGYCYSLSTEHKVTWSAANRACRERYNGTLASVFS
KVDMDWLWDFSGRKPFWIGLNDREGRGRWEWAGGEPLSYTNWRKTPPRSKMKGNKKCVLV
WRRAKWQIRDCKTSKGHRFVCSIKT
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaagggtcaaacactggcctggacctggattcctgtgcttctcctgggaatg
acctgcccatcacacggttcccttgtgaaagtcaataagggtgtaaaggtgaaacggggt
cagacagcctacctccaggacagtgatctgcagttccatattccccgtcagaaggatgca
tgcaaggtggaggtggtgctaaatgagcccataactcaacgagtgggaaaagtcatgcct
caggtatttgattgccactatctggctgatgaggtaaaatatgtccataacggatgtcca
ttattaaaggaggacacagtcaagcttcgactatacaggttcacagagacagagacatat
atggaggtgttttctcttcatgtcgacattatggaacctgaatgcagcgtcataaagctg
gggccaaaatccctgtatgttcctgaattctacagcttctctgatgtcttggatggcaat
gtggtgtccttccattatgagcagcggtcaagtctggagtgtaccattcatttaaatggc
catgacacccacttgccagcccacggccagttggtcaccggagagccagagaaagctacg
ataagaggggacgagccagagagcttcattcacctacgccagcagctagataataaagcc
agggcaatgtgtaaatctgaagactgcctgaagggtctgaagctagtaaagttcaccaaa
attccctgtgatgacttcctcttgacggggctgaggtatcaacacatagaccctccatct
ccagacgtagactacattacgatcagactggatctcaaggacacccggagtggcagcaca
tatcagtctgaacaggcctggattcctgtgcatatagtcggggcattgtccaaccagcca
ccaaaaccgtccttcatgtccatgtttatccttgaagtggaccagttcatcctcactcca
ctctccactgccacagtagacgctgaagatgaagaaactcccaagcaacttttggttttc
aacatcaccaaaccgcccgtggacggcttcatcacccatctgtccgatcatactcgccca
gtctcctcctttacatggcttgatctcaatgacatgctcattgggtatcaaccaccaaac
tcctcgaataccaaccgcaggaattacgagatcgaatttgaggttcatgattttctcttc
gagaagagcccatcaatgactgttcacatgtctgtaaggaatgcagagacgaatgcaccc
agagtgtcttggaacatgggccttagtctgttggagggtcagtctcggccaataatgtgg
gagcagctccagattgtcgacaatgacaacctgaatgctgttcgtatcatcactgtggac
ggcctgcagcatggacggctcacagtcagagggggaaagggattcatgttcactgtcaag
gacattaaagcaggcatggttcgctatcatcacgatgacagcgactccaccaaagacttt
atcatcttccgcatcaccgacggccaccatcagacccgacacaagttctccatcaagatc
ctgccgaaggacgacagccctccggtcctcatcaccaacatgttgctggaggtgtctgag
ggccagatggctttactgagaggctccatcctccaggctttagacatggactccagtgat
gactacatcctctttaacatcacccgccccccacaagcaggggaggttatgaaaatgcca
acatcagggctcacaggttatcctgtcagacactttctgcagaaggacctgtctcagtct
atggtttactatcgacacctaggaaacaaggtgtttgatgacttctttgaagtggtgctg
tcagatttccatgacccccccaacctgtcagagcctcaagtggtggtggtgcacatagag
cctgttccagaccaaccacctaaagaggttcctggttcaagtcggtgtcttgtgatcaaa
gaaacagaagtggtccatataacccggcaacagcttcactttgtagaccaggagtctcca
gacaatgaacttacatatacggtcactactacaccattctatgctggtcctcacagccac
agtccggatgctgggaggttgtttttagtcgacagtatacccaaattctccaaagactcc
aatgcaccggtgctgaggctcttcacacagaatgcagtgaacttcatgaaagtagcctac
atgcctccagtcatggacatcggcccttaccctaagtatatccagtttgtgctctctgta
accaacctccttggcaaatcagtcactgggatctgctttaacatcactctggtgccagtg
gacaaccagccgccacaggttattaccaaccctctgactgtagaggaaggagggcagtgc
cagcttggccctgaacacttggtgctgtcagacatggactctgtggaagaagctctgcat
gtggcgctccagagggaaccgcagcatggaactctgcatctcggcggcctcccactgaaa
ccggaccaggctttcactgtgcaagacctaaaaagtcttaaagttaggtacaatcatgat
agctcagaaactgtagaggaccacattgaattcatagcgacagatggctccaattcagtc
agctttatactgcaagtaaaggtgttggccatcaatgacgaggtcccagtgttggttcct
ggtctaaaaccggttctcagctgtgcagagggacaggaaatcatcatcacagctgagtac
atctacgctaccgatgcagacagcaacaacagcagcctgatcttcctgatcgcccggcag
ccttatcatggcgtggttctccggaactccattgtggttgatcgcttcatccaggcagac
attactgcgaggattatcagctacaaacacacagggctggagattggactcactcctcgc
catgacactgtcacctttgttatatctgatggagaaacggaaaactctgctttatgctgc
ggtgaagaaaatcccaccaagactagagacgtgactcaactacaacacagtcttcctgtt
tatgacctccagatcacagtgtttccagttgacagccaaccaccttcactaacagcaggc
cacatctttacagtgaatgaaggtgagtctgcccaaataactgcatctcatttgaaggcc
tttgacgtggacactgctctggacaaactggtagtcagtctcatttcatcaccccagttt
ggctacatagaaaatgttcttcccagtcctggctttgaaaaaagcaacacgggcataagc
atagcttccttttcatacaaagacatcattgacggtcatgtgaactacgtacagtccaga
caccagaggatggagcccacagctgaccagtttgtgttctgtgtatcagacggcaaacac
agctctgcacatgtccctttctacattatcattaacccgataaacgacgagataccacag
tttgtggctcgaaacatcactgtacgagaaggagaaatgaagcagctggactcatccgtt
ttacatgcgggggatctggatgtccccaaggacagcctgctcttcagtgtggtcagagcc
ccccagcatggcagcatcgtctcccaaggcagtgaaacgtcagccagcaagagtcaagag
gctagtcctctgtcccctgtggtggacttcacaatgacagatctttcaaatggtttggat
ctgatgtacatgcacgatgactcagagaatatggaggatagtttcaccattcagttgagt
gatggcaggcaccaactccaaaggcaggtgatggttaaagtgctgccagtcaacgacgag
aagccacacatcatcaggaacaatggactggaggtggaattgggagaagccaggcttatt
tccagcgttgcactgtttgcacaggacggtgacactccttcttcagaggttatgtacata
tttgacagtgttcccacccaaggactacttcagcttaaggaacgtcaggactggaggaca
ttaacagtggggatcaactgcacccaggagatggtggacatgaacctcctgcgctatgtg
aacacacgcctgcacggtgctaaaacacaggacttctttgtcttctacttgtcggatgga
aagaatcaatcgccccctcagcacttccacatctctgtcaaagatctggaaaaaggaaac
attgccatgtttgtgaagccgttgaacgtcagccgtggagaccgcgtggttttcaccacg
gacgtgctgttggccacagatggaacagaaaagctagaggagcttcagtacatcatcacc
aaccctccggctcacggccacgtagagtacataaagcatactggactggccatctccaca
ttcagtcagatggatatagcagccaaccttgtggcttacgtgcacaacaaccgagccacc
acacccacggaaacctttcagtttgttgtgagtaatggtaaaaccagccgaaatggaagc
tttgtgattgcagtggagatcgtggaccacatcctgccgtctctatcctccaacaaaggc
ctctcaattccacaaggctcctccatgatccttggtcctgactgcctggtcttgtctgac
cccgacactccacccagcgcccttacctttgtccttctccagcctccacagtatggccga
ctgcttttaggcggaaccacactaactgctggctccaacttcacccagaaagacatacag
gagctggaggtaacttacaaacacgacgggggggcttcacagatcgaccgattcgccttt
actgcctccgacagcaccaaacggggtttcctgctggaggggcagctacacacggaacct
gtattcttcactattcagatcaagcctctggataagtctcgtcctgaggttgtcaagctg
cttcctctttggaaagcagagcctctcggcgacggacgacacgggatctttgtgtcatct
cgagagctgaaggcccaagacagtgatagcagagaagaggagctaatattctgcattgtt
cgacagccctactttggttacctagaacacatgaccacaggtgattttgtaccacagcgc
ttctctcagatagagctgaacaagagaactattgcctacatcatcaacccagacagggaa
tctctctcagacagtctggagttcacagtgtctgattctttagggaacacagggccccct
cacataattcagttcagctggtccagcatagagctgtctcagcccgagtactctgtgtgt
gaggagcaggcagccatctcactggaccttgtccggaaaggaaacctggcagagtcttca
tatgtcactgtcaaggtgaaggaagtgactgcaacagccggaaaagacttccgcacaagt
ccttcttccctcattcagtttgatccaggagtgtccacgagaacctggcaaagcgagatc
attcaggatcaccttgaggagactgtggagatgtttgaagtgctgctggtctcccctgaa
ggcgcagtgatcggcagcatcaacaaggcttgtgtcaccattagggactctggtagcggt
cagccaagactgcatcaggatcaggaggctcctcttattgtagggaaagaggttcggtca
gacacgtacccccaacatggatccattcagctagagaagctgccccttcggacagagtca
gtgatctggacccgtggagacagcatctccaggtctggagcacatgtcccaaaaaagaaa
cttgaagttatgagcaacccaaagtctattgcaccgtcaacagtttttcacaacgggaca
gacattgtttacacgtatcatggcatcacgcaaatgcaagtaaaggacgacacttaccca
tcgaggaagagcagaaaggctaacatccgtgtggttaacaggggagcacagacgcaggtg
ccagctgtgcttaccgagtcaaagtcagagcctcacagaaagatctcaaaaccgcaaaaa
acagcgctggctaaagaacatgctaaagctgataacaccataccaaagccttgtgtgcca
gaactgatgggactcctgcatttcaaccagacaaccaatcaactcttttactgtaatggt
gtctcctggaaaccctgggcaccaactgatcagatggtgagtgctcaaatgtgtagtctg
gactggacctttcatggtggctattgttactccctcagcactgagcacaaagtcacatgg
agcgcagctaacagggcctgcagagagagatataacggcactttagcaagcgtattctct
aaagtcgacatggactggctgtgggatttcagcggaagaaaaccattttggataggcctg
aatgatagggagggccgaggccgctgggaatgggcgggtggtgagccgctcagctacact
aactggagaaagacgcctcctcggtccaaaatgaagggaaacaaaaagtgtgtcctagtg
tggagaagggcaaagtggcaaatcagggactgcaagacgagtaaaggtcatcgattcgtg
tgttcaataaaaacttga
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integrated database retrieval system
