Clinocottus analis (woolly sculpin): 137792488
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Entry
137792488 CDS
T10471
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137792488 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137792488 (chrnb1)
Ion channels [BR:
cana04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
137792488 (chrnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
137792488
NCBI-ProteinID:
XP_068444304
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MRGPDLLLLACCVGGLCTSGGASDVEKALMKTLFTSYNMKVRPALTPEDRVVVRVGMVLS
SLIGLNMKNEEMTTTVFMNLQWTDHRLSWKPKEHDGIEVMRIPSAKVWLPDIVLINNNDG
VFDVALHVHVQVYSNGRVTWTPPALYCSSCGVKVTYFPFDWQNCTMQFRSYTYDSTEINV
QYALDAKGNEIREIQLDEAYTEGGEWHITHRPCRKNMNDDLYEDMTFYLILERKPLYYVL
NVILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSANTHCMPMWVRKIFIHLLPPYLGMLRPKVETPLS
LEVMPRREKKVVTISKVADEYFIRKPDSSILFPKPNRFHPEGMCTDLRKFIDGPSSYLTL
PDELKSAIGAITFIAESLQAEKDSEALKEDWQYVAMVVDRMFLWIFVVFTTVGTLAIFAD
ASFNHTPTDPFKAP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcccggatctgctcctgctggcgtgctgcgtgggcggcctctgcacatcggga
ggtgcgtccgatgtggagaaggctctgatgaagacgctcttcaccagctacaacatgaag
gtgcggccagcgttgacccctgaagacagggtggtggttcgtgtggggatggtcctttcc
tccctcattggactgaatatgaaaaatgaagaaatgactaccactgtttttatgaacctg
caatggaccgatcatcggttgtcgtggaagcccaaggagcatgatgggattgaggtgatg
cgcatcccctctgccaaggtctggctgcccgacatcgtcctcataaataataacgacggc
gtgttcgacgtggcgctgcacgtgcacgtccaggtctacagcaacggcagagtgacctgg
actcccccggcgctctactgcagctcctgtggcgtgaaggtgacgtacttcccgttcgac
tggcagaactgcaccatgcagttccgctcctacacctacgactccaccgagatcaacgtg
cagtacgcgctggacgccaaaggcaacgagatccgggagatccagctggacgaagcgtac
accgagggcggcgagtggcacatcacgcacaggccgtgcaggaagaacatgaacgacgac
ctgtacgaggacatgaccttctacctcatcctggagaggaagccgctgtactacgtcctg
aacgtcatcctcccctgcatcctcatcaccatcatcgccatcttcaacttctacctgcct
cctgacgcaggagagaagatgggtctgtccatcaacgtgctgctcaccctcaccgtgttc
ctgctgctgctggcggacaagatccccgagacgtcgctgggcgtcccgatcatcgtcaac
tacatcatgttcaccatgatcctcgtcacgttctccgtcatcctcagcgtggtcgtcctg
aacctgcaccaccgctcggccaacacccactgcatgcccatgtgggtccgcaagatcttc
atccacctgctgcctccttacctgggcatgctgaggccgaaggtggagacgcccctctcc
ctggaggtcatgccccgtcgggagaagaaggtggtgaccatcagcaaggtggccgacgag
tacttcatccgcaagcccgactcctccatcttgttccccaagcccaacaggtttcacccg
gagggcatgtgcacggacctgaggaagttcatcgacgggcccagcagctacctcacgctg
cccgacgagctcaagtcggccatcggggccatcaccttcatcgccgagtccctgcaggcc
gagaaggactcggaggcgctgaaggaggactggcagtacgtggccatggtggtggaccgc
atgttcctctggatcttcgtcgtcttcaccaccgtgggcaccttggccatcttcgccgac
gccagcttcaaccacacgcccaccgaccccttcaaagccccctga
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