Clinocottus analis (woolly sculpin): 137792642
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Entry
137792642 CDS
T10471
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137792642 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137792642 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137792642 (pcdh11)
Protein phosphatases and associated proteins [BR:
cana01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137792642 (pcdh11)
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Protocadherins
137792642 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
He_PIG
DUF6249
Motif
Other DBs
NCBI-GeneID:
137792642
NCBI-ProteinID:
XP_068444491
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MDLASQAHALVVLLACVVLLCQAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCAGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPVFKDTELEVTVPENAPMGTSVAQLHASDADLGSNALIHFAFSNQISASTKRHF
AIDSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLAPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSASQQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSLI
ITSRVSPRGLFAIDKTTGNITLQEKIVAADHGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLSQ
TPEKSFNSPPPICPHKEACQLGKIMSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
TTQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGPGSNSPTSTPITTAITGTMASFGFQQSCARGAKANMVSMGVMDGR
HTLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEDPFKVIPLASFSSPGQQTPTGGGSGS
FLHEHQL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcaggcccatgcgttggtggtcttgctcgcctgtgtggtcttgcta
tgtcaggcccaggagagggactacacggtgaaggaggagcagccggagaacgtccgcatc
gggaacctgcgcaaggacctggacctcaacctggaccccaacatcaggttgtcctcaccg
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaac
acgggggagatctttaccaccaatcacagaattgaccgggagaagctgtgcgcaggggtc
ttcgctgagaaacgctgctattatgagatcgaggtggccgtgctgccggatgagatcttc
cgactggtaaagatccgcttcctgattgaggatgtaaacgacaacgcgccccttttccag
tccactgtaataaacatctccatcccggagaacacagccatcaacactcgatacccggtg
ccctcagcatttgaccccgatgtcggaatcaatgggatccaacattatgaactggtcaag
agcgtcagcgagtttggcttagacatcatagagactcctgaaggggacaagtggccacag
cttatcgttcagcagaacctggatcgcgagcagaaggacacctttgtgatgaagataaag
gtagaggatggtggcaaccctcccaagtccagcactgccatcctccaagtcaccatttct
gatgtcaatgacaaccgtcctgtcttcaaggacactgagctggaggtcacagtgccagag
aatgcccccatggggacatcggttgctcagcttcatgcctcagacgcagacctgggttcc
aacgcactgatccacttcgccttcagcaaccagatctctgcctcaaccaaacgtcacttt
gccattgacagctctacaggactgatcactgtgaagcagccactggacagggaggtaact
cctgttcacaaactcatcgtccttgccagtgacggcagctccacgccctccagagccaca
gtgattgttaatgtaacagacgttaatgacaatgttccctccatagacactcgctacatt
atcaacctggttaatgggactgttctgctttctgagaatgctcctctcaacaccaaaata
gctctcatcactgtcactgacaaggatgcagatctttatggtaaagtagcttgctacact
gaccacgatgttccttttcgattgaagcctgtctttaatgaccaatttttactagagaca
gctgcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggat
agggggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaatgcacccatcttcccccagccggaaatccaactttccataccggagaacaatgac
ccctctacacagttaataaaaatcagcgccactgacgcagacagtggacataatgctgag
attatttatactcttgcccctgatgcgcctgacgggtttaacatagaccgacggtctgga
attctctccgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtc
atagcgagggacaatggctccgcgtcccagcagagcaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacacccagagtacaacttttatgtgcct
gagaacctgcctctctacgggactgtgggcttaatcacagtgacggacgcagatgcggga
gataatgcgattataaccctgtccgttttgaacggcaaagataatttcatcatcgacccc
caaaccggtgtgatcaaacccaatatcacctttgatagggaacaacaaagctcctacaca
tttatggttaaggcagtcgatggagggcaacctccaagctcctcctacgccaaggtcaca
atcaatgtggtagatgtgaacgacaatcgccctgtgttcgtcatcccatcctccaattac
tcatatgacctagtgcgaaccaccaccacccctggcgcagtggtcaccagagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcctcatc
atcacatctagggtctcccctcgaggtctctttgccatcgacaagacaacgggtaacata
acactgcaggagaaaatagtggcagctgatcacgggttgcacaggctggtagtcaaagtc
aaagatctcggtcagcctgagtcattacatgctatcgcacttattcacttgtttgtcaat
gacactgtgtcaaatgctacctttatccaagagcagctgcgaaaaagtatggagacaccc
ttggatcgtaacataggggacagtgaggtaacacctcaagccaatggatatgtgattgtt
gtcatagcaatcatagcagggaccatgactgtcattttggtgatatttgtgactgccttg
gtgcggtgccgacagacgcccagacacaaagtggtacagaagggcaagcagagtggcgag
tgggtgtcacccaaccaagacaaccgtcagatcaagaagaaaaagaagagaaagaagcga
tcccccaagagcctcctcttgaactttgtgaccatcgatgaatccaagcctgacgacccc
acccatgagcatgttaatggcacactggatctccctgtggagttagaggagcaaaccatg
gggaagtacaactgggccacaacgccaaccaccttcaaacctgacagcccagatttagcc
aagcattacaagtctgcgtcccctcagcctacatttcaaatcaaaccggagactccagtg
gccccaaagaaacaccatgtgatccaggaactccccttggacaacacgttcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccatacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgagccag
acaccagagaagtctttcaactcaccgccccccatttgtccacataaggaggcctgtcaa
cttggcaagataatgtctgtgaatacccagcgccgcgtgacgttccatcttccagatggt
tcccaagagagttgcagtgacagcgggctgggagacccggagccgagcagcacagccagc
accacccaacctcttcccctcagcttcccccaggaggagtactatgagcaaacatctcca
aacagccgcaccgagggagatggaaactcagaccctgaatctactattgaggtgaacctt
cagaaagccttggctgaggcctctgagacctgtacccaagagtgtctgatactgggccac
tccgacagctgctggatgcccccagccctggcccagttccagggtcctggcagtaacagc
cccacctccacccctatcaccaccgccatcaccggtacaatggcctcttttggcttccag
cagagctgcgcccggggagccaaagctaacatggtcagcatgggggtcatggacggccgc
cataccctcggcaggtctgtgcccaaaaaagatgaactggacaaagggatcaaccggcca
cagttctacaacaccctggatagacactgcagtaagaaagaggaccccttcaaggtcatc
cccctggcgagcttctcctctcctgggcagcagacacccactggggggggcagcggctct
ttcttacatgagcaccagctgtaa
DBGET
integrated database retrieval system
