Clinocottus analis (woolly sculpin): 137792667
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Entry
137792667 CDS
T10471
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137792667
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137792667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137792667
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137792667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
MukB
AAA_23
Motif
Other DBs
NCBI-GeneID:
137792667
NCBI-ProteinID:
XP_068444522
LinkDB
All DBs
Position
Unknown
AA seq
2239 aa
AA seq
DB search
MGLLAQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVWVRSTNKPLYKGQCHYPNKA
MPSAGVLPWLQGMMCNIDNPCLNYPTPGETPGQVNNFNSSIIAGMMIELQTLLVNRSILS
KAQLLAEDLDQWDSVLSQGNLAQPVILRSVLRDNENFSTHLKENLSLPSTVVQSLMNAEI
KLNPVMSIPGPDNLKSILCEGKDLDEYIQFSSQAEKEAFQNVSCSRDPQQLINAQRVFLQ
NLDERKVLSEVPSPVDLSGTDRLTLIGKTTQHALPLVEEMTRLQNSMIFKAAGSLDFQKN
MIGSINMLLCGKKPAISLNSTRPMDNNTSFSFTSNSSDAFCQTLVDTLEGTPGLRYIWNT
FKQLLQGKVLYTPDTPAVRLMVKEANSTFHALAMLKELTDLWEELGPRVWDFLQNSRQVN
TLRALLANPVMAAVLNQRLNSTRLSGDLLANFLYNGPPEDRPPGMPPYDWRNAYNATSEI
LKLLSNFLGCLDLNKFEAVATESHLVSRAQELLENDTFWAAIVFANLQPNSSRPPPYVKY
KIRMDIDNAERTNKVKERLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGIIRAQTSKTQP
LGVFAQQMPYPCFVDDAFISSIGGILPMFLVLAFMYTVCMTIKDIVLEKELRLKEVLRVV
GIQNGALWSARFTENIVLLAVPCALMSVMVKYGKVLQYSDPSLIFVFLLVFCLATITQCF
FISVFFSKANLAAACGGLIYFVLYLPHLLCYAWRDVMAFEAKVAVSLLSCVAFGYGCENF
AKFEEQGIGIHWYNINKSPEEGDQYTFIVSIIMMLFDAVFYWVLTWYIENVFPGQYGIPK
PWYFPFTAAYWCEKASAVDNDPDVLKNSTEYNDYLEKPSPDMKAGVSVRNLVKIYKTGKK
LAVDRLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFINGYDILTDMDSIRK
YLGMCPQHNVLFNELTVEEHIYFYARLKGLSRDEVKIEMDQMIQDVGLPHKRKDLAKNLS
GGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMDEA
DILGDRIAIISQGKMRCCGSSLFLKKRFGSGYYLTLVRDGTEKMTSQRNGIIRREAQEEE
DRPSRNSSPDDGIGSQSWDSSDPSADLTALDQTVRCHVPEAVFLESIGQEITYILPYGGA
RDGTFALLFQGLDVAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIQTTKELLVRDCK
RGSRTTKRNSIASVHMKTEPGSGMRKERFTSKVEDLKRNASVGGKGSTVITGKELIRRQF
LALFIKRFHHARRSRKGLIAQVVLPAVFVCLSLIFSLIVPPFTEYPSLELQPWMYDLPQT
TFYSNDGPTNVEVGKVVETLVNKPGFGTRCMNGDPIPKLPCSTANGSDWLTPSVDQSVTD
IFLNGNWSMSNPSPPCQCSTPKRKIMFPDCPPAAGGLPPPQRIQNTTDTLLDLTGRNVTD
FLVKTFQRSGKTRYGGISVGGVNSQVRLNEAAVEASFRDLKDLFSLFRDNLTDQFLQKTE
TLLKKLGTRDNLKVWFYNEAWHGIVSFLSVANNAILRGNLPAGHDPSQYGISSSNHPLNL
TKEQLSYAAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVY
WLANFAWDMCNYIVPCVIVIVIFLCFQQKAYVSPPNLPALILLLLLYGWAITPMMYPASF
FFSVPSTAYVVLTCINLFIGINGSIATFVLELFDDDNVSRINDIVKNVLLIFPHFCLGRG
LIDMAKNQAMATLFSSFGEDRFKDPLSWDMVGKNLCAMSIQGVVMFSITILIQYKFFCKP
RLISGKSSSSEEEDIDVARERKRLYEGQADKDLLRICDLTKVYSRKSAPAVDGLCVGVPA
AECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRAVHQNMGYCPQFDAID
ELLTGQEHLELYARLRGVPEKEVTMVAEWGIQKLGLVKYSSKSAGTYSGGNKRKLSTAIA
LIGCPQVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMV
NGRFKCLGSIQHLKSRFGDGYTVIVRVGGSSPALKPVEDFVQQSFPGSVLKETHHNTLQY
HFPYTQGALANIFSQFTSNQHRLGVEDYSVSQTTLDQVFVNFARHQQGEDDSQAYDNAVD
TSDELPMQSVKTYQEAEMA
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctggcgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagttatatggcctctgtttctcttcttcatactggtg
tgggtgcggtccaccaataagcctctttataaaggccaatgccactacccgaataaagcc
atgccgtcggctggcgtgcttccctggcttcaaggtatgatgtgtaacatcgacaatccc
tgtttgaactatccaacgcccggggagacgccaggccaagtcaacaacttcaacagctcc
ataattgccgggatgatgatagagctgcaaaccctcctcgtgaatagatctattctcagc
aaggcacagttgctggcagaggacctggaccaatgggattcagtcctgtcccagggtaac
cttgcgcaaccagtgatcctacgcagtgttctcagagacaatgaaaatttctcgactcac
ctaaaagagaatttgtcgctgccgtcaacggtggtccagagcctcatgaatgctgagatt
aaactcaatccagtgatgagcatcccagggccagataacctgaagagcatcctatgtgaa
ggaaaagatctggatgagtatatccaatttagcagccaagctgaaaaagaggctttccaa
aatgtcagctgctcccgcgatccacagcaactgattaatgcgcagcgagtattcctgcaa
aacctggacgagaggaaagtgctttctgaggtaccttcacctgtggatctcagtggaaca
gacagactcacactgatagggaaaaccacgcaacatgcattaccattagttgaggagatg
accagattgcagaactccatgatctttaaggctgctggttctttggatttccaaaagaac
atgatcggcagtatcaatatgctactttgtggaaagaagcctgccatcagtttaaactca
actagaccgatggataacaacacgtctttctcctttacaagcaacagttccgatgctttt
tgtcagactcttgtcgacaccctggagggtacacctggcctgcgatacatttggaacaca
ttcaagcagttactgcaagggaaagtcctctacacacctgatacacctgctgttcgcctc
atggtgaaagaggcaaatagcaccttccatgccctggctatgcttaaagaactcactgat
ttgtgggaggaactcgggccacgtgtctgggattttcttcaaaatagccgccaagtcaac
acattacgggctttgctggcaaatccagtgatggctgctgtcctcaaccagcgtctcaac
agcacgaggttgtcaggcgatctgctggctaacttcctgtacaacgggccaccagaggat
cgtccacccggcatgccgccctacgactggcgaaatgcttacaacgccacttccgaaatc
ctgaagcttctctccaacttcctcggttgtttagacctgaataagtttgaggcagtcgcc
accgaaagccatctggtgagcagagcacaggagcttctggagaatgatacgttctgggcc
gccattgtctttgcaaacctccagcctaactccagccgcccccctccatatgtcaaatac
aaaatccgcatggacattgataatgcagaacgtaccaacaaggtgaaagagaggttatgg
tctcccggggctcgagacaactcctttaacgacctgcgctatatatggggaggcttcgcc
tacctgcaggatatgatggaccatggcattatacgagcacagacgtcaaagacccaacca
cttggtgtttttgcacagcaaatgccatacccctgcttcgtggacgacgccttcatctcc
agcattggaggcatcctccccatgttcctggtgctggccttcatgtacactgtgtgcatg
accatcaaagacattgtgctggagaaggaactccggctcaaggaagtgctgcgtgttgtc
ggcattcaaaacggcgccctgtggtccgcaaggttcacagagaacatagttctgctcgcg
gtcccctgtgcgctcatgagtgtcatggttaagtatggaaaagtgctgcaatacagcgac
ccctcgctgatctttgtcttcctgctggtgttctgcctggccaccatcactcagtgcttc
ttcattagcgtcttcttctctaaggccaatttagcagcggcgtgcggtggcctcatctac
tttgtcctctacctgccgcacctcctttgctacgcctggagggacgtcatggcttttgag
gccaaggttgcagtgagtttgttgtcatgtgtggcctttggctatggctgtgagaacttt
gccaagttcgaggagcaaggcatcggcattcactggtacaacattaacaagagtccggaa
gagggagaccaatacaccttcatcgtgtccatcatcatgatgctctttgacgctgtcttt
tactgggtgctcacctggtacattgagaatgtctttccaggccaatatggaatccccaag
ccgtggtacttcccattcactgcagcctactggtgtgagaaagcctcagcggttgacaat
gaccccgacgtgctgaagaactccactgaatataacgattatctggagaaaccatcaccc
gatatgaaagcaggggtctcagtccgcaatctcgttaagatatacaagaccggaaagaag
ctcgctgttgacagactgagtatggacttctacgaaaatcagatcacatcttttcttggc
cacaatggagccggaaaaacgaccacaatgtccattctgacaggactgttccctcctacg
tcaggaacagctttcatcaacgggtatgacatcctcactgacatggacagcatccggaag
tacttgggaatgtgcccacagcacaatgtcttattcaatgagctgacagtggaggagcat
atctacttctacgcccggttgaaaggactcagccgcgacgaggtgaagattgagatggac
cagatgattcaggatgtcggtttaccacataagcggaaggatcttgctaagaacttgtca
ggtgggatgcagaggaagctgtccgtggctatagcgtttgtcggcggctcaaaagtcgtc
atcttggatgaacccacagcaggagtggacccttatgcccgcaggggtatctgggaactg
ttgttgaaatacaaacaaggtcgcaccatcattttgtcgacacatcacatggatgaggcc
gacatcttaggtgatcgcattgccatcatctctcaaggcaagatgcgttgctgtggctcc
tccctcttcctaaagaaacgttttggcagcggctactacctcactctggtccgagatggg
accgagaagatgacatctcagcgaaatggtatcatacgccgtgaggcccaagaggaggaa
gaccgcccttcgaggaacagcagcccggatgatggcatcggcagccagagctgggatagc
tctgatccctcagccgatttgacagctctggatcaaactgtgcggtgccatgtccctgag
gcggtcttcttggagagcatcggtcaggagatcacatacatattgccttatggtggcgcc
agagatgggacctttgctctgctgttccaagggcttgacgtggccatggctgacctcggc
ctgaccagctacggcatctctgacaccacgctggaggagatatttcttaaagtggcagaa
gatactggagtggacgcagaaatacaaacaacgaaggagctgttggtgagagactgcaaa
agaggctcccgcacaaccaagcggaacagcatcgccagcgtccacatgaaaacagagcca
ggctctggaatgagaaaggaaaggttcacaagtaaagtggaagacttaaagaggaacgcc
agtgtcggtgggaagggatccacggtcatcaccggaaaggagctgatcaggaggcagttc
ctggcgctttttatcaagcgcttccaccacgcccgaaggagccgcaagggactcattgcc
caggtggtcctgcctgctgtttttgtgtgcctgtctctgatcttctcgctcatcgtccca
ccattcactgaatatccgagtctggagctgcaaccctggatgtatgatctgcctcaaacc
accttttacagcaatgatggaccaactaatgtggaggtgggtaaggtggtggaaaccttg
gtgaacaagcctggttttgggactcgttgcatgaatggagacccaataccgaagttacca
tgctctacggccaatggctctgattggctcactccatcagtggatcagtccgtcactgac
atcttcctcaatgggaactggagcatgtcaaacccctcccccccctgtcagtgcagcacg
cctaaacggaaaatcatgtttcctgactgtccacctgctgcaggagggctccctccacct
cagaggatccagaacaccacagacacattgttggatctaaccggacggaacgtgactgac
ttcttggtcaagacttttcaacgctcgggtaaaacaaggtacggaggcatctctgtcggt
ggcgtaaactcccaagtccgtctgaacgaggcagcagtcgaagcttcattcagggatcta
aaagacctattcagcttgtttcgggataatttgactgaccagttcctccagaagactgag
acgctgctgaagaagctgggaaccagggacaacctaaaggtgtggttctacaacgaggca
tggcatggcatagtgtccttcctcagtgtggcaaacaacgccatcctgaggggaaatctg
ccggcgggacatgatcccagccagtatggcatctcctcgtccaatcaccccctcaacctc
accaaggagcagctctcctatgcagccatggccacaacctctactgacgtggtggtgtcc
atctgcgttatctttgccatgtccttcatccctgccagctttgtcctcttcctcatccaa
gagagggtgaacaaagccaaacatctgcaatttgtcagtggagtaaacccagctgtctac
tggttggccaattttgcctgggacatgtgcaactacatcgtcccatgtgtgattgtgatc
gtgatcttcctctgcttccaacaaaaagcctacgtttcacctccgaacctgcctgctttg
attctgctgcttcttttgtacgggtgggccatcacccccatgatgtacccagcctccttc
ttcttcagcgtgcccagcacggcctacgtggtgttgacctgcatcaacctcttcatcggt
atcaacggcagcatcgcaacctttgttttggagctctttgatgacgataatgtctcccgc
attaatgacattgtgaaaaacgtgctgctgatattcccgcatttctgtctgggcagagga
ctaattgacatggccaagaaccaggcgatggccaccctcttcagcagttttggggaagac
cgtttcaaggatccactgagctgggacatggtggggaagaacctttgtgcgatgtctatc
cagggagttgtcatgttttccatcacaatcctcatccagtataagtttttctgcaaacca
aggctcatttcagggaaatcctcgtcttcagaggaagaggatatcgatgttgctcgggaa
cgcaagcgcttgtatgaaggccaggccgacaaagaccttctgaggatctgcgacctcact
aaggtctactctcggaagagcgcccccgctgtggacgggctatgtgtgggagtacctgcc
gcagagtgtttcggcttgctgggaatcaacggggctgggaaaaccaccacgttcaagatg
ctgacaggagacatcccagtctccagtggagaggccttcctaaacggatacagtatacga
acagaaatgagggccgttcaccagaacatgggctactgtccccagtttgatgccatcgat
gaactgctgaccggacaagagcatctggagttatacgcccggttacgaggggtcccagaa
aaggaagtcaccatggtggcggagtgggggatccagaaattggggctggtcaaatattcc
agcaagtcggcaggaacctacagcggtgggaacaaacgcaagctttctacagcgatagcc
ctgatcggttgtccgcaagtgattttcctggatgaaccaacaactgggatggaccccaaa
gcccggcgcttcctgtgggactgcatccttagcgtcatcaaagagggacgctcagtcatc
ctcacatcacacagtatggaggagtgtgaagcactgtgcacacgcatggccatcatggtc
aacggtcgcttcaagtgtctcggcagcattcagcatctgaagagcagatttggtgatggc
tacacggtgatcgtgagggttggtggctcttctcctgcattgaagccagtggaggacttc
gtccagcagtccttcccgggcagcgtcctgaaggagacgcatcacaacactctgcagtat
cacttcccgtacacacagggagctttggccaacatcttcagccagttcaccagcaaccag
cacaggctgggcgtggaggactactcggtgtcccagaccacgctcgaccaggtctttgtt
aactttgcaaggcaccaacaaggggaagatgactctcaggcctatgacaacgcagtggac
acttcagatgagctgccgatgcagtcggtgaagacctaccaagaagcagagatggcgtaa
DBGET
integrated database retrieval system
