Clinocottus analis (woolly sculpin): 137792857
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Entry
137792857 CDS
T10471
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
137792857 (smarca5)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
137792857 (smarca5)
RSF complex
137792857 (smarca5)
WICH complex
137792857 (smarca5)
B-WICH complex
137792857 (smarca5)
NORC complex
137792857 (smarca5)
BRF complex
137792857 (smarca5)
NuRF complex (fruit fly)
137792857 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137792857
NCBI-ProteinID:
XP_068444740
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MSEILNCLEQREEQTEVKEAVAAEEKSDSSDAGKESSSEAGADAQDASSSTTAPGYEEKV
LTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRMKNDEKQNLLSAGDNRHR
RTEQEEDEELLSESTKTTNVCTRFDDSPSYVKSGKMRDYQVRGLNWLISLYENGINGILA
DEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDR
EERNALVRDVLLPGEWDVCVTSYEILIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIV
REFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDTELVERL
HTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGKMDKM
RLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMVVLEKLLPKMKQQGSRVLI
FSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSKFLFMLSTRAGGL
GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERAEMK
LRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAILERGERK
TMEQKEKMATLGESTLRNFTMDTENTSVYKFEGEDYREKKKVITNWIEPPKRERKANYAV
DAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNP
EMPNSAQLQKEEQTKIDEAEALAEEELEEKENLLQQGFTIWNKRDFNQFIKANEKWGRDD
IENIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDSK
IGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFR
FDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRSGPKNTSAQKRKSEATPD
GRGRRKKLKL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaatcctgaactgcttggagcagcgggaagagcagaccgaagttaaagaagcc
gtagcagcggaggagaagtctgattcttcagatgctggaaaagagtcatcctcggaagca
ggggccgatgcacaagatgcatcatcatccacgacagctccgggatatgaggagaaagtg
ctgacggaccggaccaacagatttgagtacctgttgaagcaaacagagttgtttgctcat
ttcatccaaccagccgcacagaagacccccacctctcctctgaagatgaagccgggacgt
cctcgcatgaagaacgatgaaaaacagaacctcttgtctgccggagacaaccgacatcgt
cgcacagaacaagaggaggatgaagagcttctgagcgagagcaccaagacgactaatgtc
tgcactcgctttgatgactccccgtcctatgtaaaatcgggaaaaatgagagactatcag
gtccgtggactgaactggctcatctctttgtatgagaacggcatcaacggcatccttgct
gatgagatgggtttggggaagactctgcagactatttccctgctgggttatatgaagcac
tacagaaacatccctggtccccacatggtgctggtgcccaagtccaccctctacaactgg
atgaatgagtttaagagatgggtgccttcactccgcgccgtctgcctgatcggagaccga
gaagagagaaatgccctggtcagagatgtgctgctgcctggggaatgggacgtgtgtgtc
acatcctacgagatactcatcatcgagaaggccgtgttcaagaaattcaactggcgctac
ctcgtcattgacgaagctcacagaatcaagaatgagaaatcaaagctatcagagattgtg
cgagaatttaagaccaccaatcgtttgttgctgactggaacgcccctgcaaaacaacctt
cacgagctgtgggctctgctgaacttcctgctgcctgatgtctttaactcatctgaggac
tttgattcctggtttgacacaaacaactgtttgggtgacacagagctggttgaacgtctt
cacactgttctgcgtcctttcttgctccgtcgtataaaagctgacgtggagaagactctg
ttgccgaaaaaagagatcaagatgtatgtgggcctgagtaaaatgcaacgagagtggtac
acaaagatcctgatgaaggacatagacattctgaactcggcgggtaagatggacaaaatg
cgtctactgaacgttctcatgcagctgagaaaatgctgcaaccatccgtaccttttcgac
ggagccgagcctggtcctccatacacaactgaccttcatctggcagtgaacagtggcaag
atggtggtgctggaaaagctgctccccaagatgaagcagcagggttctcgtgtgctcatc
ttcagtcagatgacccgagtgctagacatcttggaggactactgcatgtggaggaactat
ggttactgccgccttgatggccagacgccgcatgaggagagacagatctctatcaacgca
ttcaatgagcccaatagttccaagttcctcttcatgttgagcaccagggctggaggactg
ggtattaacctggctacagcagatgtggtcatcctgtacgactctgactggaaccctcaa
gttgatcttcaggccatggaccgagcgcataggattggtcagcagaaacaggtacgcgtc
tttcgcttcatcactgaaaacacggtggaggagagaattgtggagagggccgagatgaaa
ctgcgcctggactccattgtcatccagcaaggaaggctcgtcgacccaagtgcaaacaaa
ctgggtaaggatgagatgctgtccatcatccgacacggagccacgcatgtgtttgcttct
aaagagagcgagatcacagatgatgacattgacgcaatcctggagagaggtgaaaggaag
actatggagcaaaaggagaagatggctactctgggtgagagcactctgagaaacttcacc
atggacacagagaacaccagtgtgtacaaatttgaaggagaagattacagagagaagaaa
aaggtcattaccaactggatcgagccacccaagagagaaaggaaagccaattacgctgtg
gatgcctacttcagagaggctctgcgagtcagtgagcccaaagcacccaaggctcctcgt
cctccaaagcagccaaatgtacaggacttccagttcttccctccacgtctttttgagctt
ctagaaaaggaaattctgttttacagaaaaaccatcggttacaaggttccacgtaatcca
gaaatgccaaattcggcccaactccagaaagaagagcagactaagatcgatgaggccgag
gcgctcgcagaggaagaactggaggagaaggagaacctgctgcaacagggatttactatt
tggaacaaacgcgacttcaaccagttcatcaaagccaacgagaagtggggaagagatgat
attgagaacattgccagagaggttgagggaaaatcgccagaggaagtcatggaatattct
gctgtgttctgggagcgctgcaacgagctgcaggacatcgagaagatcatggcccagata
gagagaggagaagccaggatccagagaagaattagcatcaagaaagcactggactcaaag
attggtcgctataaagctcccttccatcagctccgtatctcttatggcaccaacaaaggc
aagaactacacagaggaggaggaccgcttccttatctgcatgctacacaagctgggcttc
gacaaggagagcgtgtacgacgagctgcgtcagtgcatccgcaactcgcctcagttccgc
ttcgattggttcctcaaatcaaggactgccatggagctacagaggcgatgcaacaccctg
attacactgatagagagagagaacatggagctggaagagagggagaaggctgagaagaag
aaacgcagcggtccaaaaaacacctcggcccagaaacggaagtcggaggcaaccccagac
ggtcgcggacgtaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
