Clinocottus analis (woolly sculpin): 137792965
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Entry
137792965 CDS
T10471
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
KO
K13111
WD40 repeat-containing protein SMU1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137792965
Spliceosome [BR:
cana03041
]
Complex B
Other components
Complex B specific factors
137792965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_ACSF4
LisH_TPL
NBCH_WD40
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IP5PC_F
VPS8_N
DUF7899
Beta-prop_WDR11_2nd
DUF7165
WDR54
Beta-prop_IFT122_2nd
LisH
Motif
Other DBs
NCBI-GeneID:
137792965
NCBI-ProteinID:
XP_068444924
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MAMKMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFIADIESGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYIHLDNL
LTCSYFDPCEAYLKGSSKEKRRRAIAEALAREVSVVPPSRLMGLLEQVGSMRIQPYPDHL
SPDATIDTSGNGQRQIEKESFPTQLYRHIKFGRRSHVECARFSSDGKYLITGSVDGFIEV
WNFNTGKISKDVKYQAQDSFMMMDDAVMCMCFSQDTDLLATGAQNGKIKVWKIQSGLCLR
RFEHAHNKGVTCLSFSKDNNQILSASFNQTIRIHELRSGKTLKELNSHSSFVNDAFFTQD
GFHIISASSDGTVKIWNTTSCQCIHTFKSLSRASDDPVNNVIPLPQNPEHFVICNHSNTV
VIMGMNGQTVKTFSSDRKEKANFVCCTLSPRGEWIYCVGEDLVLYCFNYTTGILQKTLTV
HEKDVIGIAHHPHENLIATYSEDGLLRLWKP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaagatggagccctcagatgtgatccgcctcatcatgcagtacctcaaggag
aacaacctctacagaacgctgaccacattacaggaggaaacaaccgtctcgctcaacaca
gtggaaagcatcgacagctttatcgcagatatagagagcggccactgggactccgtcctg
ctggctatcgagtccctcaagttgcccgacaacacgcttattgacctttacgagcaggtt
gtaatggagctcattgaaatgagagaggtgggagccgctcgctcactcctcaggcaaact
gacccgatgatcatgctgaagcagacgcagccagagaggtacatccatttggataacctg
ctaacatgctcctactttgacccttgtgaggcatacctgaaaggtagcagcaaggagaag
cggcgcagggcgatagccgaggcgttggcgagagaggtcagcgtggtgccaccttcccgc
ctcatggggctgctggaacaagtcggttctatgagaatacaaccgtatcctgatcatctc
tcccctgacgcgaccatcgacacatctggcaacgggcaaagacaaatagaaaaggaaagc
tttccaacgcagctgtaccgccacatcaagtttgggcggcggtcacatgtggagtgcgct
cgcttctcttctgatggcaaatacttaatcactggatcggtggacgggttcattgaagtc
tggaactttaatactggaaaaattagtaaggatgtaaagtaccaggcccaagacagcttc
atgatgatggatgatgctgtgatgtgtatgtgcttcagtcaggatacagatctactggca
actggagctcagaatggcaaaataaaggtgtggaagattcagagcggcttgtgcctgcgc
aggtttgagcacgcccacaacaaaggtgtgacctgtctgagcttctccaaggacaacaac
caaatcctcagtgcctcatttaaccagaccatcagaattcatgaactgagatcaggcaag
acactgaaggagttgaacagccattcgtcgttcgtaaatgatgcatttttcactcaagat
ggattccacatcatcagtgcctcatctgatggcacagttaagatttggaatacaacatcc
tgccagtgcatccacactttcaaatctctgtcccgggcctcagacgaccctgtcaacaat
gtaattcctcttccccaaaatccagagcactttgtgatttgtaatcactccaacacggtg
gtcatcatgggcatgaatggacagacggtgaagacctttagctcagacagaaaggaaaag
gccaattttgtgtgttgcaccctgtcaccccgcggggagtggatttactgtgtgggagag
gacttagtgctgtactgcttcaactatacgacggggatactgcagaaaacgctgaccgtt
cacgagaaagatgtaattggaatcgctcaccacccacatgagaatctgatcgccacgtac
agtgaggacggcctcctgaggctatggaaaccttaa
DBGET
integrated database retrieval system
