Clinocottus analis (woolly sculpin): 137793037
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Entry
137793037 CDS
T10471
Name
(RefSeq) THO complex subunit 4-like isoform X1
KO
K12881
THO complex subunit 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03015
mRNA surveillance pathway
cana03040
Spliceosome
cana05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137793037
09122 Translation
03013 Nucleocytoplasmic transport
137793037
03015 mRNA surveillance pathway
137793037
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137793037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137793037
03041 Spliceosome [BR:
cana03041
]
137793037
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137793037
TREX complex
137793037
Spliceosome [BR:
cana03041
]
Complex C
Other components
EJC/TREX
137793037
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137793037
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_10
RRM_3
RRM_5
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
137793037
NCBI-ProteinID:
XP_068445048
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MADKMSMSLDDIIKLNKKGGGGRGGRSSGGQGGSPGRAGGSSRPVRSRQNNFNRERTNRS
APYTRPRELPDKWQHDMFEDNAGGHRQSAAPVRSVENNGKLLVSNLEFGVSDLDIKELFA
EFGTLQKASVHYDRSGRSKGTADVHFETKAEALKAMKHYNGVPLDGRPMKIQQVTSEVEA
DYRSTTQSSNRGFDRSRLGQPKFERSERGDRGERGERRQGGGGFRGRGRGGGNRPQLSAE
ELDAQLDAYNAKMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatgagtatgtccctggacgacatcatcaagctcaacaagaaaggaggc
ggcggccgcggaggacggtcgtccggcgggcagggcggaagcccaggtcgggccggcggc
tcgtcgaggccggtgcggagtcgacagaataactttaaccgcgagagaaccaacagatcc
gcgccgtacacccggcccagagagttgccagacaaatggcagcatgacatgtttgaggac
aatgctggtgggcacagacaaagtgcagcaccggtgagaagtgtggaaaataatggcaag
ctgctggtttccaatctggaatttggtgtctctgacttggatattaaggaattgtttgcg
gagtttgggacattacagaaagcatctgtgcattacgaccgatctggtcgcagtaaagga
actgcagatgtccactttgaaactaaggcagaagcactcaaagccatgaagcactataac
ggagtcccacttgatggccgccctatgaaaatccagcaagtgacttcagaggtggaagct
gattatagatctaccacacaaagttcaaacagggggtttgaccgcagcagacttggacag
cctaagtttgaaaggagtgagcggggtgacaggggggagaggggtgaaagaaggcaaggt
ggtggaggcttcagaggtcgtggacgagggggtggaaacagaccccaactttcggcagag
gagctggatgcccagttggatgcttacaatgccaagatggacaccagttaa
DBGET
integrated database retrieval system
