Clinocottus analis (woolly sculpin): 137793068
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Entry
137793068 CDS
T10471
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03410
Base excision repair
cana03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137793068
03450 Non-homologous end-joining
137793068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cana03400
]
137793068
Enzymes [BR:
cana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
137793068
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
137793068
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
137793068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT_2
BRCT
NTP_transf_2
PTCB-BRCT
Ribosomal_S21
Motif
Other DBs
NCBI-GeneID:
137793068
NCBI-ProteinID:
XP_068445102
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MEHRHGIMKAFPKVKRARVLQGKDAPPVKKKHEEFDTTGNTFDGVTVFLLPAGIGNARCQ
IFQRQIQQNGGQTEISLCASVTHVVVDDNMNRDRALRLLKVDCMPPGVKLVKCIWLSLCI
SEKQLLDVDDYSLLLPKRESETIKEEQLNVKPADGTIAEPMLDQTKQEKTTDMTVPDTKE
EMRGEEDGVSQRDLEALITGQHPKEETPGPSIDPSPDSTAQKVVSGKWVCAQSSQSKMNN
FNKPITDKLEVLAKAYTNQGDRWRALGYSKAVNALKSYHKPITSYQEACQIPGIGKRMAD
KIDEIMESGHLRKLDHLGEAVPVLELFTNIWGAGTKTAQLWYQQGFRTLEDIRTKAHLSN
TQKIGLKHYDDFLDRMPREEAGAIEKVLKEAAQAVDPGLVAMACGSYRRGKASCGDVDVL
VSHPDGKSHKGVFSKLLQNLHDSGFLTDDLVSHEENGEQKKYMGVCRLPGPGQRHRRLDV
IVVPYNEFACALMYFTGSAHFNRSMRALAKTKGMSLSEHSLNKDVVRQGNLKVCTGTPFA
TPTEKDVFSLVGIPYRQPHERDW
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcgtcacgggattatgaaagcctttcccaaagtcaagcgagctcgagtttta
caaggaaaggatgcacccccagtaaagaagaaacatgaagaatttgataccacagggaac
acttttgatggtgtcacagtgttcctcttgcctgctggaataggaaatgctcgatgccag
atctttcaaagacaaattcagcagaatggaggacagacagagatttcactgtgtgccagt
gtgactcatgttgttgtggatgataacatgaacagggacagagcactgcgcttactaaaa
gtggattgtatgccccctggagtcaaactagtgaaatgcatttggttgagcttgtgcatc
agcgagaaacaacttctggatgtcgacgactacagccttcttttacccaagagagaatct
gaaactattaaagaagagcagctgaatgtgaagcccgctgacggaactattgcagagcca
atgttggatcagaccaagcaagagaagactacagacatgacagttccagacactaaagag
gaaatgcgaggtgaagaagacggtgtctcacaaagggacctcgaagctctcatcactggc
cagcaccccaaagaggaaactcctggccccagcatagaccccagtccagactccactgct
cagaaggtggtctcagggaagtgggtctgtgcccagtcctctcaatctaaaatgaataac
ttcaacaaacccatcacagacaaactagaagttctggccaaggcctacacaaaccagggg
gacaggtggcgcgcgctgggctattccaaggctgtcaacgcactgaagagttaccacaag
cctattacatcatatcaggaggcttgtcagatcccaggaattggtaaacgcatggccgac
aaaattgacgagatcatggagagtggtcacctgcggaagctcgaccacctcggggaggca
gtgccagtattggagctttttactaacatctggggtgcaggaactaagactgcacagctg
tggtaccaacagggctttcgcacattggaggacatccgtacaaaagcccacctgagtaac
actcagaaaataggacttaagcactacgatgactttttagaccgcatgcccagagaagaa
gccggagccatagagaaagtgctaaaagaagctgcccaggccgtagacccaggcctggtg
gcgatggcatgtggctcctatcgtcggggaaaggcctcatgtggagatgttgacgtactt
gtttctcatcctgatggcaagtcccacaaaggggtgttcagtaaattgttacagaatctc
catgacagtgggtttttgacagacgacctggtgagccatgaggaaaatggtgagcagaag
aaatacatgggtgtctgccgtttgccaggacctggacagcggcaccgcaggctggacgtc
atcgtagtgccctacaatgagtttgcctgtgctctcatgtatttcaccggatcggcacac
tttaaccgctcaatgagagcgctggcgaagacaaaaggaatgagcttatcggagcactcg
ttgaataaagatgtggtgcgtcaaggtaacttgaaggtgtgtactggcacaccatttgct
acaccgacagagaaggatgtttttagtcttgtaggcataccatacagacaacctcatgaa
agagactggtga
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