Clinocottus analis (woolly sculpin): 137793112
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Entry
137793112 CDS
T10471
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03410
Base excision repair
Brite
Enzymes [BR:
cana01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
137793112 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
137793112 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
137793112 (aptx)
DNA repair and recombination proteins [BR:
cana03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
137793112 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
137793112 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137793112
NCBI-ProteinID:
XP_068445185
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All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MPICWLISEENNHKPIRLPHQQTVVLGRGPETTIKDKKCSRQQVELKAECNKGYVKVKQL
GVNPTYVDSVVVAKDNEVKMKAGQRLHIVNQLYPYTVQFKEDPTHGGTKRPRELSSEDRE
SRGEDLSVKAAKQKEKVSVSVSLGEATKNIESLGHWSQGLKTSMQDPKMQVYKDDKVVVI
KDKYPKARYHWLVLPWQTISSLKALSEEHCHLVKHMQQVADQMVRQCPDAGLLRFRTGYH
AIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFMESHDVIQMLEKNGRVNVKEGTSE
LLKLPLRCHMCRKDIPTIPALKEHLKSHFPS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttgctggcttattagtgaggagaataatcataaacccattcgactgccacac
caacagactgttgtcctgggtcgaggtccagagacgactattaaagacaaaaaatgctct
cggcagcaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagttaaacagctg
ggcgtgaaccccacctacgtagattctgtggtggtggcaaaggacaatgaggtaaaaatg
aaagctggacagcggcttcatattgtcaaccagctctacccatacactgtacagttcaag
gaggatcccacccatggcggcaccaaaagaccacgagagttgtcttcagaggacagagag
agccgcggagaggatttgagtgtaaaagcagccaaacagaaagaaaaggtctctgtgtca
gtcagccttggagaagccacaaaaaacattgaaagtttaggacattggagccaaggtctg
aagacatcaatgcaagacccaaagatgcaggtatacaaggatgacaaggtagttgttatc
aaagataaatacccgaaagctcgctaccactggctggtcctcccgtggcagaccatttcc
agcctgaaggccttaagtgaggagcactgccacctggtgaaacacatgcagcaagttgct
gaccagatggttcggcagtgcccagacgctggcttgctacgtttccgtacagggtaccat
gccatccccagtatgagtcatgtacacctccatgtgatcagccaagactttgattctcct
tgtttaaagaacaaaaagcactggaactcatttacaactgactatttcatggagtctcat
gatgtcattcagatgcttgaaaaaaatggaagagtgaatgtgaaagaaggaactagcgag
ttgttgaaactgcctctccgctgtcacatgtgtcgcaaagatattcccactataccagct
ctgaaggagcacctaaagtctcactttcccagctaa
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