KEGG   Clinocottus analis (woolly sculpin): 137793379
Entry
137793379         CDS       T10471                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04382  Cornified envelope formation
cana04510  Focal adhesion
cana04512  ECM-receptor interaction
cana04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cana00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137793379
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137793379
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137793379
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137793379
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cana04147]
    137793379
   00536 Glycosaminoglycan binding proteins [BR:cana00536]
    137793379
Exosome [BR:cana04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137793379
Glycosaminoglycan binding proteins [BR:cana00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137793379
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 137793379
NCBI-ProteinID: XP_068445574
LinkDB
Position
Unknown
AA seq 1147 aa
MLLTSCSALRSSTRLWCVLMILSAPPAVLGGELTEPCGGRDCSTCQCLPAKGARGSPGPL
GRQGPQGPPGFPGPLGPPGQKGQRGGEGPPGAAGLKGTSGSVGVPGFPGLEGIPGHPGPA
GGPGFPGLDGCNGTRGGGGAPGPPGAPGADGEPGFDGLKGFPGDPAVYFIQYPGVPGDVG
SGGLPGRQGELGLPGPLGVLGPPGLDGTNGLPGLPGSRGAPGEKGRSLPGQKGDEGDQGL
QGPPGPFEYVDPPEDLYLKGEQGTQGPKGVCGRPGLPGLDALPGTKGEKGIVGFPGPRGF
SGLSGLPGNRGLKGIPGSPGLPGLIGREGPKGMLGDLGPKGLPQNVVVTHSGDVGDPGAP
GPRGPPGDLGLMGMHGPPGGPGRSVPGPAGAEGLKGSAGSRGDKGDPGQVYRDRPTPGEP
GKPGYPGPRGLKGEQGRPGSYCLPGAQGESGPPGDRGPPAVQGLLGFKGSPGDCFCGPPV
VLRGPLGLVGDLGSPGFPGSPGAPGLRGVEGLPGDTGERGRQGLGGFPGVKGFKGQKGDF
TMVDFKGEKGNIGQQGPPGRQGLSGRKGLNGPPGAPGSPGPEGESFASSPGERGFPGYPG
QKGSSGPSGLTGRGVVGAVGQRGDPGSPGPEGLLGPSGPKGVKGDTLPCVPRNPGHPGEK
GDIGDAGYRGLPGPPGFRGITGPDGPKGDNGRPGLLGPPGRQGPPGSVGDTGKEGSEGFS
YGGDPGSPGLPGSFGLRGPAGESDVGPSGPIGFPGRLGSQGPKGVPGLPGVSGLKGLPGL
AGGPGVEGQRGQDGAPGRTGPQGPKSDFCDAGKLGASGLFGPQGPIGPPGFSGEKGEIGQ
EGTPGYGPQGPQGKPGSPGFSGYPGPQGPSGPGGDSGLPGLCGQTGPMGPQGQAGGPGAP
GRTGALGPLGRQGERGSNGRDGGPGCEGRKGEKGCKGAPGPPGETKGVPIKGDRGKDGPP
GTNGFPGPRGNKGFQGPPGKLGCQGVNGPVGAVGLLGPPGPDGPPGPSGSPGGPGPTGFI
GFPGETGDPGDPGCPGKDGEPGHQGCTGSKGDKGDSVSCSGPPGDEGPFGDLGPQGPPGP
QGIPGRPGFLGVPGQRGCKGDPGHQGELGPPGVVGPSGPRGRSGLPGLPGEAGADGPPGP
LGFLGLP
NT seq 3442 nt   +upstreamnt  +downstreamnt
atgctgctgacttcctgctccgccctccgcagctccacccggctctggtgcgtcctgatg
atcctgtcggctcctccagcagttctcgggggcgagctcaccgagccgtgcggcggcagg
gactgctccacctgccagtgtttaccagccaaaggagcaagggggtctccaggccctctg
ggccggcaaggccctcaggggcccccgggcttcccgggccctctggggcctccagggcag
aagggccagagaggaggcgaaggcccgccaggagcagccggactgaaaggaacctcgggg
agcgtcggcgttcctggttttccgggtttagaaggaatcccgggtcacccgggtccagct
ggaggtccggggttcccgggtctggacggatgcaacggaaccagaggagggggaggggcc
ccggggccgcccggagcgccaggagccgacggggaaccgggttttgatggactgaagggg
tttccaggagatccagccgtgtacttcatacagtaccctggagtacctggagacgtgggc
tctggtggacttcctggtcggcagggtgaactgggtctgcccggtccgctgggggttctg
ggtcctccaggactcgacgggaccaacggtctccctggtctgcccggctccaggggcgcg
cctggagaaaaaggtcgatctctgccgggacagaaaggagacgagggggatcagggcctc
caggggccgccggggccctttgagtacgtggaccctccagaagacctgtacctgaaagga
gagcagggcactcaggggcctaaaggagtctgtggaaggccaggtctgccgggtctggac
gctctccccgggaccaaaggagagaaaggcattgtggggtttcctggtcccagaggattc
tctggtctctctggtctgcccggcaacagaggactcaaggggattccaggaagtccaggt
ctcccaggtctgattggacgagagggtccgaagggcatgctgggagatctgggtcccaaa
ggcctcccccagaacgtggtcgtcacacactcaggtgacgttggagaccccggggccccc
ggacccaggggccctccaggagacctggggctcatggggatgcacggcccccccggaggt
cccggccgatccgtaccgggtccggcaggtgctgagggtctgaagggaagtgcagggtcc
agaggggacaaaggagatccaggtcaggtgtacagagacagacccacacctggagaacct
gggaaaccaggatatcctggacccagaggactgaaaggagagcaggggagaccaggtagt
tactgtcttcccggggctcaaggagagtctgggcctccaggtgatcgggggcccccggcg
gtccaaggcttgctcgggttcaaaggtagtcctggcgactgtttttgcggccccccagtc
gtactgaggggccccctcggccttgtgggagacctggggtctccagggtttccaggatct
ccaggggccccgggtctgagaggagtggaaggtttacccggagacacaggagagcgcgga
cgtcagggcctgggaggatttccaggtgtcaaagggttcaaaggtcagaagggagatttc
accatggtggattttaaaggtgagaaaggaaacattggccagcaaggccctccaggcagg
caaggactctcagggagaaaaggactcaatgggcccccgggcgctcctggaagccccggc
ccagagggtgaaagtttcgccagttctcctggagaaagaggcttccctggatacccgggg
caaaagggctcatcagggccttcaggcctgacggggcgaggtgtcgtcggagcagtagga
caacgtggggaccctgggagcccgggacctgaaggactcctgggcccctcgggaccgaag
ggggtcaaaggcgacactctgccctgtgtgcccagaaaccccggccaccctggtgagaaa
ggagacattggagatgcaggttacagaggactgccgggtccgcctggtttccgtggcatc
actggacctgatggacctaaaggggacaatggtcggcctggactgcttggaccacctgga
cgacaaggacctccaggttctgttggtgataccggaaaagaaggatctgaaggcttcagt
tatggtggcgatccaggttctccggggctcccaggctcttttggactcaggggcccagca
ggtgagtctgatgttgggccctcgggacccattggcttcccgggacgtctgggctcccag
ggacctaaaggagtccccggcctccctggcgtcagtggactaaaaggactcccgggtctg
gcagggggccccggagttgagggccagagaggacaagatggggcccctggtagaactggc
ccccaggggcccaaatctgacttctgtgacgcagggaaacttggtgccagtggccttttc
ggccctcaaggacccatagggccaccaggtttttctggggagaaaggtgagatcgggcag
gagggtactccaggttatggccctcaaggccctcaaggaaaaccaggctctccaggtttc
tcaggatacccggggccccagggcccctctgggcccggtggagactctggactgcccggg
ctctgcggtcagacaggtccgatggggccgcagggccaggccggagggccgggggcccct
ggacggaccggggccctcggacccctggggaggcagggggagagaggatccaacggacga
gacggaggtccaggatgtgaaggtcggaaaggagagaaaggctgtaaaggggccccgggg
cctccaggagagaccaagggcgtccccatcaaaggagacagagggaaagatggaccccct
ggaaccaacggctttcctggaccacgaggaaataaaggtttccaaggtcctcctggtaag
ctggggtgtcagggcgtcaacggacccgtaggcgccgtaggacttctgggaccacctggg
cccgacggaccaccggggccttcaggatcacctggaggccccggaccaaccggattcatc
ggcttcccaggggagaccggagatccgggtgatccgggctgtccaggaaaggatggagaa
cccggccaccaaggatgtactggatccaaaggtgataaaggagactccgttagttgttct
ggtcctcctggagacgaggggccttttggagacttggggccccaaggaccgcctggacct
caaggaattcctggaagacccggtttcctcggggttccaggacaaagaggatgcaaagga
gatccaggccatcagggggaactgggtccaccaggtgtggtcggtccctcgggtcccaga
ggccggtccggtcttccaggtcttcctggtgaagcaggtgctgatgggcctccaggacct
ctcggcttcctgggacttccag

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