Clinocottus analis (woolly sculpin): 137793407
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Entry
137793407 CDS
T10471
Symbol
fxr1
Name
(RefSeq) RNA-binding protein FXR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137793407 (fxr1)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137793407 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
137793407 (fxr1)
mRNA cycle factors
Stress granule specific factors
137793407 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
137793407
NCBI-ProteinID:
XP_068445623
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MEELVVEVRGSNGAYYKGVVKDIHDDSLTIAFENNWQPERQVPFNDVRMPPPADGKKEIG
EDEEVEILSKANDQEPCGWWLAKVRMMKGAFYVIEYAACDATYNEIVTFERLRPINPNKA
ITKNYFHKCTVPVPQDLQEACQGENAHKEFKKAVGACRISYCPETSQLLIVSTNEATVKR
VSLLSDMHLRSIRTKLLLMSRNHEATKHLENSRQLVSSFQEEFMVRTDLMGLAIGSHGNN
IQQARKVPGVTAIDLDEETGTFRIYGETAEAVKKARNYLEFLEDSVQVPRALVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKQPRQESTQGMVPFTFVGTKESIGNVQVLLEYHISY
LNDMTELLAAGQQLEEELSQIVDYTQGSSLARFRICNTRHTGCNVDEVEELRLERMQIDE
QLRQITQVHRSGDRERGERGERGGGAGGYNTDGSANAAASSSSLHGSRSYNGRGRGRRGH
GYSTGYGTNSEQSNASETDSERRDELSDWSLAGEDQDRERERGSRPQRDARRRPGPGRGR
GGPGGRGRGGRGGGGGGYGNNSAGPRDHEDNHAYGVTETNTETDQTADTDASESNLPANR
RRRSRRRRTDEDAALMDGMSESDNASMSENGVDDSEAKPQRRNRSRRRRARLPEERQPVT
VADYISRADSQSRQMPTTKDTKKNKDVVQVDAIAEDSPPSLPTTTNGSNNAADTESSNAA
GAPAKVSYHGDSNPQPVVNGLS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggtggtggaggtccgtggctccaacggggcttattacaagggcgttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagagcgc
caggtacccttcaatgatgtcaggatgccaccgcccgctgatggcaagaaggagattgga
gaggacgaggaggtggagatcctctccaaagccaatgatcaggagccttgtggttggtgg
ctcgctaaagtccgtatgatgaagggagctttctatgtgatagagtatgcagcctgcgac
gccacttacaatgagatagtgacctttgagcgtctgcgtccaatcaaccctaacaaggcc
atcactaagaactactttcacaagtgcactgtccctgttcctcaagatctacaagaagcg
tgccagggtgaaaatgcccataaagagtttaagaaagctgtgggagcctgtcgcatctca
tactgccctgagaccagccaactactgattgtgtccaccaatgaggcgaccgtaaagcgt
gtttctttgctgagtgacatgcatctgcgcagcatcaggaccaagttgctgctcatgtca
cgcaaccacgaggccacaaaacacctggagaactccaggcagctggtgtcgtctttccag
gaggagttcatggtgagaacagatctcatgggcctggccatcggcagccacggcaacaac
atccagcaagcacggaaggttccaggtgtcactgccatcgacctcgatgaagagactggc
accttcaggatttatggagagacagcggaggccgtgaagaaggccaggaactacctggag
tttttggaggactctgtccaggtgcccagagcacttgttggcaaagtgatcggtaagaac
gggaaggtcatccaggagatagtggacaagtccggtgtggtgagggtcaggatagaagga
gacaatgacaacaagcagccccgacaggaatcgacacagggaatggtccccttcaccttt
gtcggtacgaaggagagtattggcaatgttcaggtcttgctggagtaccacatctcttac
cttaatgacatgacggagcttctcgcagcaggccagcagctcgaggaagagctgagccag
attgtggattatacacagggaagcagcctagcaagattcagaatatgcaacacgaggcac
actggatgtaatgtagatgaagttgaggagcttcgtctggagagaatgcagattgacgaa
cagttacgtcagatcacgcaggttcatcgctcaggtgacagagagagaggagagagaggg
gaaagaggaggaggagcaggagggtataacacagatggcagtgccaatgccgccgcctcc
tcctcctctttacatggcagtcgctcttacaacgggcgaggccgtgggcgcagaggccac
ggctacagcactggatatggcaccaactcggagcagtccaacgcctctgagaccgattca
gagcgcagggatgagctcagtgactggtcccttgcgggagaagaccaggacagggagaga
gagagaggctcacgaccacaacgagatgcccgcaggaggcccggacccggaagaggccga
ggagggccgggaggacgggggagaggaggaagaggaggaggaggaggaggatacggcaac
aactctgcagggcctcgggaccacgaggacaaccacgcctacggtgtcacggagacgaat
acggagaccgaccagacggccgataccgacgccagcgagtccaacttgcccgcaaaccgg
cgcagaagatctcgccgacgcagaaccgacgaggacgccgccctgatggacggcatgagc
gagtcggacaacgcctcgatgagcgaaaatggagtcgatgactcagaagctaaacctcag
cgtcgtaaccgtagtcgacgtcgccgcgctcgcctgcctgaggagaggcagccagtgacg
gtggctgactacatatcccgggctgattctcagagcagacagatgccgaccactaaggac
accaagaaaaacaaggatgtggttcaggtggacgccatcgctgaggacagcccaccatct
ctgccgacaaccaccaatggttctaacaatgctgccgacacagagagcagcaatgccgcc
ggagctcccgccaaagtctcctaccacggagactctaacccacaacctgttgttaacgga
ctctcctag
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