Clinocottus analis (woolly sculpin): 137793500
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Entry
137793500 CDS
T10471
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cana04990
]
137793500 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
137793500 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_NXF1-5
PDZ_2
LRR_5
LRR_EndoS
LRR_At5g56370
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
137793500
NCBI-ProteinID:
XP_068445792
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MDNYSTLQLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLRELWLDNNSLQCIPGAIG
KLRQLRYFDIAKNRIETLDTEISGCESLEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQ
LTSLPNTIGSAKPKQGLSLLEELDCSCNELESLPPTIGYLHNLRTFAADENFLSELPREI
GNCKNVTVMSMRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
DFDDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKNVHAGHGHQHQHQHQ
HQHQHQHQHQHQHQLSTGTATSAGTNMEHTHLSKDQYEPPWPLPPKEVIDREMQDFSQSQ
LMDQGSMHNSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLL
GKDKKESTDEEVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPPGNPHAHAHPHPHTHSHA
HAHPHPHAHPHPHPHPHTPALPAPNKDQAPQTHWTNRLAQSFPKPIDSKPLLSQRETPPS
GTLQQRGDRRPLSEPFDWSEAPHYDNTGFDPEESPLDPPTSTGSQGNPPLGSKPRSQSTH
GRRPLLRQERIVGVPLELDTQTLPFHGNQRSTPDIDPQSGHPSQNPWQNWTRTPSPLEDR
TAFPSKLDLTPTSSPNPDRKDPRLEQGAAPLPGSWTYHENQGEQNRKDQLSVSGGNKVTV
VMSKSSDRLSPMMRETRSKFKKSQSIDEIDIGSYKVYSIPVDSYSTSIEQQTSLDRQDLP
CSMEQTNMSRSQSAPMLDDELMFPGQSGQNQKPAIPHKAYHFDHNYNPQVTMDRRVPPPF
PNTPDYVNHSSKALEYINQPGKTLPKELVSPRYRAYPPLEMFSFPQSPINQDGPPSQHQQ
PIPAQRSRPGFLRRADSLVSSTELALFRRVHEAQQEALQEAQYRQQADPPHYGRALAYST
PMEHSALTNMADSQSQMMHNKRNGRYDDDYPTYQEQKKPMIGYPTKSLTQRRPLSARSYS
TETYGASQARPVSARPTMAALLEKMPPDYTLATCPEKPSDDTIKVRPGVPQKPDDITSRM
PADWRQQLLRHIEAKRLDRSGVLKHNTLTLGMLCQGGGHGQGRSSTLNFNLYNNTKHEPP
AGRWLPLPPPPSAKATPSQQAAMLDNDQEGMSGSNQWAPYSLGRRDVPPDNLMKKSAHSH
NPSHQSHNTMIVTSSSSSSSTTPHRVVVQQGYDGMMNKGVQYQPGMPLSVVPSGGPGQYQ
GNMSQGHPSPGQGYPGSGLPMALSPSGNQSQYNPHSSHTSHQPATNPQYHGNQGMVHSNQ
GMVHSNQGMVHTNQGMVHSNQSMVHSNQGMVHSNQGMVHSNQGMVHSNQGMVHSNQGMVH
SNQVVMTHTNPRPQSARCLLQTKGQKSTDGFQEQLCVRIEKNPGLGFSISGGISGQGNPF
KPSDMGIFVTRVQHDGPAASALQPGDKILQANGHSFLHMEHETAVSLLKSFQPMVDLLVL
RDSSTC
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggataactactctactctacaactgcagtgtctggaaatgaccactaagcggaagctg
attggccggctggtgccgtgccgttgtttccgcggtgaagaggaagtgatctcagtgttg
gactactcccactgcagcctgcagcaggtcccaaaggaaatcttcagctttgagaggact
ctggaggagctttacctcgacgccaaccagattgaggagctacccaagcaactcttcaac
tgccaggccttgaagaagctgagcatgcccgataacgacttgtccaacctgcccaccacc
atcgccagcttggtgaacctcaaagagctcgacatcagtaaaaacggtatccaggagttt
cccgacaacataaaatgctgtaaaggcctgtctgtggtggaggccagtgtcaacccgatc
accaaactcccagatggttttacgcagctcctgaatctgacccagctcttcttaaacgat
gccttcttggagtatctgcctgctaactttggcagactctccaaactacggatcctggag
ctcagagagaaccacctgaaaaccatgccaaagtccatccacagactgacacagttggag
aggttggatctgggtagcaatgaattctctgaagtgccggaggtgttggaacagatccac
aacctaagagagctgtggctggataacaactctctccagtgtataccaggggcgatagga
aaacttcgtcagttgcgatacttcgacatagcgaagaaccgcatcgagacgttggacacg
gaaatctccggctgtgagtccttagaagacctgctgctgtcctccaacatgctccagcac
ctgcctgactctataggaatgttaaagaagctgacaacattgaaggtagatgacaaccag
ctgacctcactgcctaacaccatcgggagtgcgaagcccaagcaaggtctgtctctgttg
gaggagttggactgtagttgtaatgagttggagtcgttgcctcccactatcggctacctg
cacaacctgaggaccttcgctgctgacgagaacttcctctcagagctgccgcgggagatc
ggtaactgtaagaacgtgacggtaatgtcaatgcggtcaaacaaactggagtttcttcct
gatgagatcggacagatgaccaaactacgagttcttaacctcagtgacaacaggttaaag
aatctaccgtttaccttcactaagctgaaggacctggcagctctctggctttctgacaat
cagtccaaggctctgatcccactgcagacagaagcccaccctgaaaccaaacagaaggtt
ttgaccaactacatgtttcctcagcaaccgcgacatgatgaggattaccagtcggacagt
gacagctttaatcctactctatgggaggagcagagacagcagaggatgactgtggccttt
gactttgacgacaagaaagaagaggaagacaactctgggaaggtcaaggtggagataaac
ctaaagcgctacccaacaccctaccccgaggaccttaagaacatggtcaagtcagtgcaa
agccttgtgggtaaaaacgtacacgccggacacgggcaccagcaccaacaccagcaccag
caccagcatcagcaccagcatcagcatcagcaccagcaccagctgagcacaggcactgcc
acctcggcaggaaccaacatggaacacacacacctcagcaaagaccagtacgaaccaccg
tggcccctgcctccgaaagaggtgatagacagagagatgcaggacttctctcagtctcag
ctaatggatcagggatcaatgcataactctggcattgacattcccaagaggaaggacaaa
gaggacctgacagagagctcagaggactccatgggcggctctcccaacgacatccgtatc
tccgacatgaggcccaccctggtggagccgccgatgtacaaaccaaaggtggttctgctg
gggaaggacaagaaagagtctacagatgaagaggtggataagctccactgtctgaaccac
agcggctcctcagccacttactccgactactctccctcacagggctcctctggctcctcc
aacccgcccggcaacccgcacgcacacgcacacccacacccacacacacactctcacgca
cacgcacacccacacccacatgcacacccacacccccacccccacccacatactcccgcc
cttccggccccaaacaaggaccaggcccctcaaacacactggaccaacagactggctcag
tctttccccaaacctattgactccaagcccctgctgtcccagagagaaacccctccatca
ggaaccctgcagcagcgcggggatcgacgcccactaagcgagccttttgattggtctgag
gctcctcactatgacaacacaggttttgatcctgaggagtctcctctggatcctccgacc
tctactgggagtcagggaaacccgcccctgggctccaaaccccgcagccagtcgacacat
ggccgccgtcccctcctcaggcaggagcgaattgtaggagtacctctggagcttgacact
cagacgctccccttccacgggaaccaacgctccactccggacattgacccacaatccgga
catccttcccagaatccctggcagaactggaccagaacccccagcccactggaggaccga
accgccttcccctccaaactggacctgacaccgacctcgagccccaacccggaccgcaag
gatccaaggctggaacaaggcgcagcgcctttgcccggcagctggacgtaccacgagaac
cagggggagcagaaccgtaaggatcagctgagtgtcagcgggggcaacaaggtaaccgtg
gtcatgagtaaaagctcggaccgcctgtcccccatgatgagggagacgagatccaagttc
aagaagtctcagagcatcgatgagatcgacattggctcctacaaggtctacagcattccc
gtggacagctacagtacatccattgagcaacagactagtttggatcgtcaagacctgccc
tgctctatggagcagaccaacatgtcacggtcacagtctgcccccatgttagacgacgag
ctgatgttcccaggacagtcgggacagaaccaaaaacctgccatcccgcataaggcctac
cactttgaccacaactacaacccccaggtgaccatggaccgccgggtccctccccccttc
cccaacacaccagattatgtcaaccactcatcgaaagccttggagtacatcaatcaacca
gggaagacattacccaaggagttggtgagccctcggtatcgtgcatatccaccgctggag
atgttttctttcccccaatcgccaatcaaccaggatggtccgcccagccagcatcagcag
ccaatccctgcacagcgctccaggccagggtttttgaggagagcagattcattggtgagc
tccacagagctggctttgttccgcagagtccatgaagcccagcaggaggcgctgcaggaa
gctcagtacagacagcaggcggacccccctcattatggtcgagctctggcctactccacc
cccatggagcactctgctctcaccaacatggccgacagccagagccagatgatgcacaac
aagagaaacggtcgctacgatgacgactatcccacctaccaggagcagaagaagccaatg
attggttatccgaccaagagcctgactcagcgccgccccctgtctgccagaagctacagc
actgagacatatggagcatctcaggcgcgtccagtgtcagctcgtcccactatggcggcc
ctgctggagaaaatgccccctgactacacgctggccacctgccctgagaaaccatctgat
gacaccatcaaagtaagacctggcgtaccacagaagcccgacgacatcacctccaggatg
cctgccgattggaggcaacagctacttaggcacatagaggccaaacgattggacaggagt
ggtgtcctaaagcacaacacgctcacgctgggcatgctctgtcagggcgggggtcacggc
caggggcgcagcagcactttgaactttaatctttacaataacacaaagcatgagccccct
gctggccgctggctgccactacctcctcctccgtctgctaaagctaccccttctcagcag
gctgccatgctggacaatgatcaggaggggatgtcggggagcaaccagtgggctccctac
tcacttggcaggagggacgtcccacctgacaacctcatgaaaaagagtgcccactcgcac
aacccttcccaccagtcacacaacaccatgatcgtcacttcctcttcctcctcctcctcc
actacgcctcaccgtgtagtcgtgcagcaaggctatgacgggatgatgaacaaaggggtc
caataccaaccgggcatgcccttgtcggtggttccctctggggggcctgggcagtaccaa
ggcaacatgtctcaaggccacccctctcctggacagggttaccccggctccggcctgccc
atggctctgtccccgtctgggaaccagtcccagtacaacccccactcctcccacacatcc
catcagcccgccaccaacccccagtatcacggcaaccagggcatggtccatagcaaccag
ggcatggtccatagcaaccagggcatggtccacaccaaccagggaatggtccatagcaac
caaagcatggtccatagcaaccagggaatggtccatagcaaccagggcatggtccatagc
aaccagggcatggtccatagcaaccagggcatggtccatagcaaccagggaatggtccat
agtaaccaggtggtcatgactcacaccaacccacggcctcagagcgctcgctgtctgctg
cagacgaaaggccagaagagcacagatggtttccaggaacagttgtgtgtgagaatagag
aagaaccctggtcttggtttcagtatctctggtggcatcagcggccaggggaaccccttc
aaaccctccgacatgggtatctttgttactagggtacagcatgacgggccagccgcctcc
gccctgcagcccggagacaagatactgcaggctaacggacatagttttttacacatggag
cacgagacagccgtctctctgctgaagagtttccagccgatggtggacttgttggttctg
agagacagcagcacttgctaa
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integrated database retrieval system
