Clinocottus analis (woolly sculpin): 137793732
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Entry
137793732 CDS
T10471
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04148
Efferocytosis
Brite
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137793732 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
137793732
NCBI-ProteinID:
XP_068446159
LinkDB
All DBs
Position
Unknown
AA seq
2374 aa
AA seq
DB search
MGFFRQLSLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETPGQVGNFDNSILSRLFVDAQTVLSYSGNRR
FSGFQDLMESVRRLGERPGAWPNLPVEEYLRANETFSSFLLTNGNLSSVTVDQLLKARLN
FQVAVAGAQLQLKDLVCNASMLGQFLKVDQGEAAMDDLQTELCNLPADVLREAERIFLSQ
LDFTKFFTRERLMANAGDLRVISQAVTSVSQELAVLVDDFSSLSSFADMSAALRLLSPEN
RSALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTNPDRDNDTTP
FCKRLIHGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEMNKTFEDMQILQELN
AAWMEVGPQIKNYMESSVQIQLLQNLLRRPEVAVLVNLRLENTSWTASRIARFLSTPSPD
AQRKPNAPPTWLDIYNDLSHTITTLAQVTECFSLNKMEGLETEGQMIDRALELLEDREFW
AGLVFLLPNSSSTDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVSRVLTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLVSAGLLIAMLKCGDILPYS
DPAVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
THKVFASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYSFTTSIVMLYLDAF
IYATAAWYIEAVFPGEYGVPRPWYFIFQINYWGGVPLEAGMPIPPAPTEQDEENIEPEPT
DLILGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGLDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEEEVKAELD
TLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTMVKRE
GLDTSTPSSTSICTSTSTSTNKLPALKDSESSMSEDTGLGSEGSSSYLAALLSLAQQHIP
GARLVEESGREAVVNLPQTAAKDSSLAIFLSELDQRLTELGISSYGLSDSTLEEIFLRVA
EETGVDAEPELQAGSPLRQQPAAEHVEEPETGGKKFLKQEPQETDLLTGDGRGGIPLTGW
WLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLVVPPFGKYPAMQLQPW
MYGEQYTFFSNDAPGNPAIENLLDALLDQPGFGTKCMEKEEEDNRTSPRCEGERAGPFMR
PQVSLSTWQMFSKGNWSGDTPSPECQCSTEDVRRMLPDCPQGAGGMPPPQIKRLTGDILQ
NLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHQVQDSIMAI
RTRHQVQQNSSLDHLLNRLPDFLGGLNSQNNVKVWYNNKGWHAMVSFVNVMNNGLLRASL
PPGPERKRHGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVPASFVLFLIE
ERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPASMVVLIFICFQQQSYVSESNLPAL
VLLLLLYGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNE
VNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLNPLEWDTVGKNLFAMAA
EGIIFFIFTILLQYKFFIRLESWWAEPEMPPLGPEDEDVSRERERVKSGKAQSDILSMID
LSKVYKSGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTDVTCGEAFINQHS
VLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEESVTKVAQWGVKKLGLTQ
YAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRA
VVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLTDSQSNLDSCP
ITTHMKSSFPSIELKERHQSVLQYQLPSHACCLARVFDVLANNYEELGVIDFSVSQTTLD
QVFVNFAKEQTDDDVLTDVVISNNTTVQTNLTTLPSNINTPTIQPQPPITPPRPSKTPQQ
RDKSCDSKPKEVKSKKPKAGKVKSKEGKANGEKSNSTAMTRRGRSGSSGSDNSGNVGVQE
DSSKSSGSKRRAGSSSKNPSALFIVDSNTQDSAL
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgggatttttccgacagctttcccttctgctttggaagaacatcacataccgcaggagg
aacaagatccagctgatcatcgagctcctatggccactcttcctcttcgtcatcctcatc
tcggttcgccattcacaccctccctacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggatccagggaattatctgcaacatcaacaacccg
tgcttccacagcccgacaccaggggagacgccgggccaagtaggcaactttgacaactcc
atactgtctcgtctcttcgtggacgcgcagactgttttgtcctacagtggaaaccggaga
ttctctggctttcaggacctgatggagagtgtccggaggctgggagagagacctggagcc
tggccaaatctcccggtagaagaatacctgagagccaatgagacgttctccagcttcctc
ctgaccaatggcaacctgtcgtctgtgactgtggaccagctgctgaaggctcgtctcaat
tttcaggttgctgtggctggcgctcagctgcagctcaaggacttggtgtgtaacgccagc
atgttaggacagtttttgaaggtggaccaaggagaagccgccatggatgatctgcagact
gagctgtgcaacctgccagctgacgtcctgcgggaggctgaacgcatttttctttctcag
ctcgactttaccaagttcttcacgagagaacgtctgatggcgaacgccggtgacctcagg
gtcatcagtcaggccgtcacctccgtttcccaagagctggccgtcctcgtcgatgacttc
tcctctctgtccagctttgcggacatgagcgcagcgcttcgtcttctgtctccggaaaat
cgctcagctttgcccagagagagttttcgtgctttttcgaggatcatgtgtggtcaccct
gaggttggcggtgagcgcatcccgtcactgaactggtatgaagacaatgacatcaagtcc
ttcttaggaaaaaatgggactgaagacacaaacccggaccgtgacaacgacaccactcct
ttctgtaaacgtttgatccacggtcttgagtccaaccctctgtctcgcattgtgtggaga
ggaataaaacctttgtttattggaaaactgctctacacaccagacactcctgcagtacaa
caagtcatgaaagagatgaacaagacttttgaggacatgcagatcctccaggagctgaat
gcggcctggatggaggtgggaccgcaaatcaagaattacatggagagcagcgtgcagatt
cagctgctgcagaatttgctgagacggccagaggtcgcagtactggtcaacctgcgcctg
gagaacacgtcctggacggcttcacgaattgcacgttttctgtccacgccttcaccagat
gcccaaaggaagcccaacgcgccgccaacctggctggacatctacaacgatctcagccac
accatcaccacgctcgcacaagtcactgagtgtttctctctgaacaagatggaggggttg
gagaccgagggtcagatgattgacagggctctggagctcctggaggaccgggagttttgg
gcgggtttggttttcctgctgcccaactcctcgtccactgacctgccgccccacgtcacc
tacaaaatccgaatggacattgatgatgtgacccggaccaacaaaatcaaggacagattt
tgggatcctggtccagcagcagacccatttaatgatatgcgctacatttggggtggcttt
gtgtacgttcaggacctggtggaaagagccgtgagccgcgtgctgaccggcgttcaacaa
acaaccggcatctacatccagcagatgccttacccctgctatgtggatgacgttttcctc
cgagtgctgaaccgctctctgccactcttcatgacactggcctggatctactcggtggcg
atgatcatcaaaggcgtggtgtatgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacgggaacgctgtggctcagctggtttatcagcagcatcgttcctttc
ctggtctctgcggggctccttatcgcaatgctgaagtgcggggacatcctgccatacagc
gacccggctgttgtgtttttcttcctgacggcgttcgccaccgccaccatcatgcagtgt
tttctcatcagtacattcttctcgaaagccaacctggctgcagcatgtggagggctgatc
tactttggcctttacctgccgtacgtactgtgtgtggcttggagagaccgcctcaatacc
acccacaaagtcttcgctagtttcctgtctcctgtggcgtttggcttcggctgtgagtat
ttctctcagtacgaagagcaaggcgtgggcatccagtggtacaacctccactccagtccc
gtggaaggagactcgtacagcttcaccacctccatcgtcatgctttacctggacgccttc
atctacgccaccgcggcctggtacatcgaggcagtgtttcctggtgaatatggggtcccc
cggccctggtacttcatcttccagatcaactactggggcggagttccccttgaggccggc
atgccgatcccccctgcacccacagaacaggatgaagagaacattgaaccagaacccact
gacttgatcctgggtgtgagcatcagaaacctggtgaaaatatacaagaagggagccaaa
ctagccgtgaatcacctcaatctgaagttctacgaggggcagatcacttctttcctcggc
cacaacggagccggcaaaaccaccaccatatctgtcctgactggcctgtttccaccgacc
tcgggcactgtgtacatcaaggggctggacatccgtcacgacatggacatcatccgcagg
acgttgggagtttgtccacaacacaacgtcctgtttgacatactgacggtggaggagcat
gtgtggttttacggctgtctgaagggtttgtctgaagaggaggtgaaagccgagctggac
actctgctggaagatgtcggccttctgcataaacgacacgaacagaccaaaaacctctct
ggtggcatgcagaggaagttgtctgtggcgatagcgtttgtcggaggctctaaggtggtt
gttctggatgaacccacggctggggttgatccatactcgcgcagaggaatctgggatcta
ctgctcaaatatcgcaaagaccggaccatcatcctgtccactcactacatggatgaggca
gagctgcttggtgaccggatcgccatcatttcccagggaaagttgtgttgctgcggctca
ccgctcttcctgaaatcccgccttggatctggctactacctcactatggtgaagagggag
ggactggacaccagcactcccagcagcaccagtatctgcaccagcaccagcaccagcacc
aataagctgcctgctctcaaggacagtgagtcatccatgagtgaagacaccggcctggga
agtgagggaagtagctcataccttgcggcattgctctccctggcccagcagcacatcccg
ggtgcgaggctggtggaggagtcggggcgcgaggccgtggtcaacttgccgcagacggca
gccaaggacagcagcctggccatcttcctgtccgagctggatcagaggctgaccgagctg
ggcatcagcagctacggtctgtcagacagcacactggaagagatctttttgcgtgtggcg
gaggaaacaggcgtggatgctgaaccggagctgcaggccggatctcccctcaggcagcag
ccagcagctgaacatgttgaggaaccagagaccggagggaaaaagttcctaaagcaagaa
cctcaggagacagacctgctgactggagatggccgaggtgggatccctctgaccggctgg
tggctgacgtggcagcagctgagggctctcttcatcaaacgctggctttatgctcgacgg
agccgcaggggcttcttcgctcagattgtcctgcccgcggtgttcgtgctggtcgctctg
ctcttcagcctcgtcgtgcctccgtttgggaaatatcccgccatgcagctgcagccctgg
atgtacggagaacagtacacgttcttcagcaacgatgcacctgggaacccggccatagag
aacctgctggatgctctgctggaccagccgggttttggtaccaagtgcatggagaaagag
gaggaagacaacagaacgagtcctcggtgtgaaggcgagcgggccggccccttcatgcgg
cctcaggtctctttgtccacctggcaaatgttcagcaaaggcaactggagcggagacacg
ccgtctcctgaatgtcagtgtagcacagaggacgtacggcggatgctcccagactgcccg
cagggcgccggtggaatgccgcctccgcagattaagaggctgactggagacatcctccaa
aatctgacgagttataacatctctgattacctggtgaaaacatactctcagattcttaag
aaaagcctaaaaaccaagaagtgggtgaatgagttcagatatggaggtttctctctcggg
ggcagcgccactcagactttatctcaagtccaccaggtccaagactcaatcatggcgatt
cggactcgtcatcaagttcaacagaacagttcgctggatcatctgctaaacagactgccg
gattttctcggaggactgaacagccaaaacaacgtcaaagtgtggtacaataacaaaggg
tggcatgccatggtgtcgtttgtcaacgtgatgaacaacggcctgctgagagcaagtctg
ccaccgggtccggagaggaagagacacggcatcacagcctacaaccacccgctcaacctc
accaaggaacaactcacagaaatagccatgatgaccacgtccgtagatgttctggtttcc
atctgcgtgatctttgccatgtccttcgtgccggccagcttcgtcctttttctgattgag
gagcgagtcagcaaagccaagcaccttcagtttgttagcggggtgaaaccgatcctttac
tggctggccaacttcacctgggacatgttgaactacacggtcccggcctccatggtggtg
ctgatcttcatctgcttccagcagcagtcgtacgtctcagagtccaacctgcctgctctc
gtcctgcttctcctgctctacgggtggtccatcactcctctgatgtacccagcgtccttt
ttgttctccgtcccgagcacggcctacgtcgtcctcacctccatcaacctcttcattgga
atcaacggcagcattgccaccttcgtcctggagctgtttgttgacgagcatctgaacgag
gtgaacaggatcctgaagaaagtgtttctcatcttcccgcatttctgcctgggacgagga
ctcatcgacatggccaaaaaccaggccatggcagatgctttccagagactgggcacgaag
caaaccctgaaccctcttgagtgggacactgtggggaagaacctgtttgcgatggcggct
gaaggtatcatcttcttcatcttcaccatactgctgcagtacaagttcttcattcgcctc
gagtcgtggtgggccgaacctgagatgccgccactcggtccagaggacgaagacgtcagc
agggagagagagagggtcaaaagtggcaaagcccaatcagacatcctctccatgatagac
ctgagcaaggtctataaatcaggcaggaagccggcagtggatcgtctctgccttgggatt
cctcgtggagagtgtttcggcctgctgggggtgaacggagcagggaagacctccaccttt
cgcatgctgaccggagacacagacgtcacctgcggagaggctttcattaatcagcacagt
gtgctgacagagatggagcgagtccaccagctgatgggttactgtccacagtttgacgcc
atcagcgacctgctgacgggtcgcgaacacctggagctgtatgcccgcctgcggggagtg
ccggaggagtcagtcacaaaggtggcgcagtggggcgtgaagaagctggggctgacccag
tacgccgagcgggaggctggaggctacagcggaggcaacaaaagaaaactctccacggcc
atctccctcatcggggctcctcctgttatattcctggacgaacccaccactggcatggac
cccaaagccaaaaggtttctgtggaactgcatcctcagcgtcaccaaggaaggaagagct
gtggttctcacctcccacagtatggaggaatgtgaggcgctctgcacgaggatggccatc
atggtgaacggcaggtttcagtgtctcggatctgtacaacacctgaagaacaggtttggt
gacggctacactatcatcctccgcctgacggacagtcaatccaacctggactcgtgcccc
atcaccactcacatgaagagctcttttcccagcatcgagctgaaggagcgccaccagagc
gtgctgcagtaccagctgccctcgcacgcctgttgcctggctcgtgtcttcgatgtgctg
gccaacaactacgaggagctgggcgtcattgacttctctgtttcacagaccaccctggac
caggtatttgtcaacttcgccaaagagcagacagatgatgacgtcctcacagatgtggtc
atcagcaacaacacaacagtgcagaccaacctcaccacactgccctccaacatcaacact
cccaccatccaaccacagccgccaatcacaccccctcggccaagcaaaactccacagcaa
cgcgacaaatcatgtgacagcaaaccaaaagaggtcaaatccaaaaagccaaaagctggc
aaggtcaaatctaaagaaggcaaagctaacggagagaaaagcaacagcacggcaatgacc
aggagaggccggagtggcagcagtggatcggacaacagcggcaacgtcggagttcaggaa
gattccagtaaatccagtggctccaaacgcagagcagggagctccagtaaaaatccttcg
gcgctctttatagtcgacagcaacacacaggacagtgcactatga
DBGET
integrated database retrieval system
