Clinocottus analis (woolly sculpin): 137793985
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Entry
137793985 CDS
T10471
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cana03037
]
137793985 (rp1l1a)
04812 Cytoskeleton proteins [BR:
cana04812
]
137793985 (rp1l1a)
Cilium and associated proteins [BR:
cana03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
137793985 (rp1l1a)
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
137793985 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
137793985
NCBI-ProteinID:
XP_068446588
LinkDB
All DBs
Position
Unknown
AA seq
2567 aa
AA seq
DB search
MHSVRAEMWDLHPPCEHASPLPPQPPCNLRPAHLTTGSPAKRLTFYKSGDSQFGGVRMAV
HKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGTHAIKQLEQLQDGGCYLCSDRRQAKPV
DMELAGKRPSIWYHHSRRPQRPESSTATPPGHPSHRQRRILLVKNSEPGLRRSVVLSRRS
TRSLRAFLEEVSEVMQFHVRKLYTAEGRRIDNVQSLMTCPGVLVCVGREAFSPVLVNFIR
KSSEEKLPGLGSRSPGLGPRTPGNGARSPAAQGARSPPHGAQSRASEYSEGPESKKNVNF
GLETKKSIIHPRSDSSNRSTRFSMSSEKSFGNGVGSYAHARPAIMNDDIEKRVLVNKDGS
LSVEMRVRFRLRNDETLQWSTQVKKAPSLTNECQAQPHYLQQGQSESCSDPDSASFDPEG
VDYSRQPPQRVLEGNNCPCCYQRPEQQYDLWENPAHSHRKHPIPPPHASSRTHTVTRHAH
SSSSSSSCNSRRVVRCRARVSSGGGGAERSHLVQEEMFLTEQVERRVEVEQEEETHVEVC
RVSRCCSRSEVDLRPLQSVEDELTMEEEQERVPSAISSSSHVLQSLKEDQDDDLPASASQ
CCHCNGSSPSPISQTRQHDEPTSNVSACSVHSEEHKEGDGEAGSRAVSAASSSHCGAADP
HSTAEAEEMDRAPSSKSRTSRASSRSSKALVANTEEAGAADDENEDVNRVVSVLSGHTGV
SLQSKASSLCPDCGGCKRGDNSGSSSRASQKSHHSKQTSPKPLSPLSSQEIANIGSENDD
DDDDDGSEGSASSTHSNKSNLTNNDRCSASSNALTGSAPSAMSRTSNPDLAGKEEVRAPS
VISATSHGSNRSHKSGCKGSGAAEKEEGRSPSAVSAQSNMSAKSSRSHTSNCSATADIKT
SQEAEGENTGERAQSSLSAKSGASAKTNASVKIRTKEDDAIKRTPSALSVKPDEAQRPDS
VLSAKSAKSNVSAKSGTSHRSTCSHCTRAVSPADEPKATGQEVGIEAEERAASAISAKSN
LSVKSHKSNKAPERSLSPKSGTASQKSGRSGKSSTSCKSNDEIVGSPNAKKNEMLEDEQK
RSESVTSAKSASSAKSGRAKSPAEDGLKTGDRSPSAMSGKSHTSAKSSKSQKSNQTTASP
NKADIPSAETNGQAEPDENVRVASVLSVKSKSSVGSRTSHKSSSSLRPVSPNPNVTVKSP
DSEEGNESAARAKSAASVKSKVSTSSRKSNRNGTTDENVEEVKARQSKPQGQMLSPRSAC
PSRTQSPKAASPVQQLLHEPNVGDTRGPSVLSVHSTISAKSGKSKCSCGAASAKDDKEAE
KKQDDEELESEQASDRAASILSSSTKRSRRESGGTEQPLSRNSSGSVSLGLPEDQDTADS
DSGKSSVNFHTNAERKSRVKTPTPRVPDSTEPSSMKEKREETESIVSQRSSVLNRPAVDI
PTIQTPGGSRHKGEEAGEQTDRGASAISAKSSKSHKSSCSCGVIAAAAQTPASQIEAGKY
LETGSVRSASSTSNVGTPNSGTPSAGSLASAKVRSKSSASASTKKANVAGNSGEAISRPG
SKADGKKDMSDDKSPCGLRPGSAASAQSGSTIKASEKSKGEDSVKDHKAKSSGSVKTSRS
QKKDVKSSSPCPVHNPRTGSKVETHSESTLAHSLSAADMLKETMAAARPQSRQSKASKTS
AKSSRDRTDLEELELSPACLPNASPNEVVSDWLRSIPANSSLLALGDEPHEDVVEEKPGE
EEAKEEGEGPEKVEEQETAEGEEKEEGVGCDTAKEEQSSGPAPGDAVKPKTLLLSTDPLP
RNMCSSAAVMKVLLGSSMGRCRSLPEVSPVYGRRLSTSARGLLDCLAQLQLIEPAMSPGF
DPKKDEHHEGIMTILQSLWLTEPRNTEKVEAMGAKDIGTEQVSPPRSSSGVGMSSGSGGS
GKENGNQPGGEPTQSKAIEDEGAEKLVGEEPVQSDIQSTVIPSPDKPSSSDKSSPTDTER
ETPDDSSSATPPTVLRSPLSKRRSQDPDPGWVLQLLKKLEKQFMSHYVSAVAEFKVRWDL
DDSLMLDTMIGELRDEVSRRIQSSVECEVRKIQGRAGKGGRMPRPPQKGNLSRESTMTEN
RRRILKVMKKQSLITAESLCDEETPGEFSDQRSDDEYCPCDACVLKKMAARPVKANPLAA
DVPVMMEFDLLKILQLKKSPAPAAAPAQPAEGDSNITEEEGRSLEVLREEEEEEEEEETK
EDIKAPIVLEETIREEDEELGKEEDGDEAGKEEVEDEKEESSAGDEEQGETGGEEAGEEE
MSENGEEEEVECLCQCAVNEEGEEETAEEDEAEETSDNTGEGEGETGTGEEESDKEAAEG
EGETTEKEEGEAEVEECEVSEFKEEEEEETTGRESGGEERSGETEDDNAAIKDDSAVVEE
FGEGDDSASAEEEKGGESEEQGEEEESASSKGHVVTATEGEEADGEDSDTDGKRPSDTSV
EDSSCEAAGAAGEEDAVEEFPPEEEVASKRKDGALLHQFTRTSVESQPGSLEDVDPGARH
HPVNVIEVPKMAAGGSGGGTGSGRRSRSPGRVQRRKPKEADDDLDDF
NT seq
7704 nt
NT seq
+upstream
nt +downstream
nt
atgcattcggtccgcgccgagatgtgggacctccaccccccgtgtgaacatgcctcgccc
ctccccccgcagccaccctgcaacttgcgcccggcccatctgaccacaggcagcccggcc
aagcggctcaccttctacaaaagcggcgacagccagttcgggggcgtcaggatggccgtc
cacaagcgcagcttcaaatgcttcgacgccctgctggacgacctttcccaaaaggtgccc
ctgccatttggcgtgcggactgtgacgactccccgcggcacccacgccatcaagcagctg
gagcagctccaggacggcggctgctacctctgctctgaccggcgccaggcgaagccggtc
gacatggagctggccggcaagcgtccgagcatctggtaccatcacagccggaggccccag
cggcccgagtcctcgaccgcaacaccgcccggccatccctctcacaggcagcgacggatc
ctgctggtgaagaacagcgagccgggactgaggaggagcgtggtgctcagcaggaggtcc
accaggagcctaagggcctttctcgaggaggtgtccgaagtgatgcaatttcatgttcgc
aagctctacaccgctgaggggcgcaggattgacaacgtgcaaagcctcatgacttgtcct
ggtgtgttggtgtgtgtcggtcgggaagcttttagcccagtgctggtgaactttatcagg
aagagctcagaggagaaacttcccggtctgggcagcaggtctcccggtctgggccccagg
actcctggtaatggggcccgatctcctgctgctcaaggagcgagatcgccacctcatgga
gctcagtccagagccagcgagtacagcgaagggcctgaaagcaagaagaatgtaaacttt
ggtctggaaaccaaaaaaagcatcatccaccctcgatccgattcctcaaaccgttcgacc
cgtttctccatgtcttcagagaagtcgttcggcaatggtgtcggcagctacgcccacgcc
agaccggccattatgaacgacgacattgagaagcgggtcctggtcaacaaagacggcagc
ctctcggtggagatgagggtgcgttttcgcctccgcaacgacgagaccctgcagtggtct
acacaagttaaaaaagccccatctctgacgaacgaatgccaggcccagccccactacctg
cagcagggccaatcagagagctgctctgaccccgattctgcatccttcgaccctgaaggt
gtggactattcccgccaacctccgcaacgtgtgttggaggggaacaactgcccctgctgc
taccagagaccagaacagcagtacgacttgtgggaaaacccggcacacagccacagaaag
caccccatccctcccccacatgcatccagccgcacccacaccgtgacgagacacgcgcac
tcttccagctcttcctcgtcgtgtaattccaggagggtggtgcgctgtcgagcgcgggtc
tccagcggcggaggaggtgcggagcggagccatctggtgcaggaggagatgtttttgacg
gagcaggttgagcgcagagtggaggtggagcaggaggaagaaacccacgtcgaggtgtgc
cgagtgagccgatgctgcagccgaagtgaagtagacctacggccacttcagtcagtcgag
gatgagctgacgatggaggaagagcaggagcgtgtgccgtctgccatcagtagctcctcg
catgtccttcaatcgctgaaagaggaccaggatgatgacctgccggccagcgcctcacag
tgctgtcattgcaacggatcatctccatccccgatctcccagacccgccaacacgacgaa
ccaacgagcaacgtctcggcctgttctgtccactctgaagagcacaaggagggtgacggc
gaggcaggaagcagagccgtatctgcggcctcttccagtcactgcggagcggccgacccg
cattcaacagccgaagcggaggagatggatcgagctcccagctccaagtccagaaccagc
agagcctcgtccaggtccagcaaagccctggtggcaaatacagaggaagcgggggctgca
gatgatgagaatgaagacgtaaacagggttgtcagtgtgttgtctggtcacacaggagtt
tctctgcagtcaaaggcatccagtctatgtcctgattgtggcggctgcaaacgcggggac
aactctggttcaagcagtagagcatcgcagaagtcccatcactccaaacaaacctctcca
aagcccttatcgcctctctccagccaagagattgcaaatattggcagcgagaatgatgat
gatgatgatgatgatggctccgaaggttcggcctcgtcaacgcactctaacaagtccaac
ctcaccaacaatgaccgctgctctgcatcatcaaacgccctgacgggtagcgcacccagc
gccatgtccagaacgtccaatcccgatttggcaggaaaagaggaagttcgggctcctagt
gtcatctcagccacaagtcacgggtccaatagatcgcacaagtctggctgtaaaggcagc
ggcgcagctgaaaaagaggaggggagaagccccagtgctgtttcggctcagtccaacatg
tccgccaagtccagcaggtctcacacatccaactgcagcgcaacagctgacataaagaca
agccaggaggcagagggagagaacactggggagagagcacaaagctccttgtcagctaaa
tctggtgcttcggcaaagacgaacgcttcagtcaagatcagaactaaggaggatgacgct
attaaaagaactcccagcgcactttctgttaagcctgacgaggcacaaagacctgatagc
gtcctgtctgctaaatcagcaaaatcaaatgtgtcagcaaagtccggcacgtcccacagg
tccacttgcagtcactgtacgagagcagtatctccagctgatgaacccaaagcaactgga
caggaagtaggaattgaggcagaggagcgagcagcgagtgccatatcagccaaatccaat
ctttctgttaaatcccataagtccaacaaagctccggaaaggtcactttctcccaagtct
ggaacagcgagtcaaaagtccggcagatcgggcaagtcttcaacgtcgtgcaagtctaac
gatgaaatcgtgggatctccaaacgctaagaaaaatgagatgctagaagatgaacagaag
aggtctgaaagtgtaacgtctgctaagtcagcctcttctgcaaagtctggccgcgcaaaa
tctccagccgaagacgggttgaagacaggcgacagaagccccagcgccatgtcggggaaa
tcacacacttctgccaagtcctccaagtcacagaagtcgaaccagaccacagcatctcca
aataaagcggatattccttctgctgagacgaatggacaagcggagcctgatgaaaatgtc
cgggtggccagtgtcctctctgtaaagtcaaaatcatcagtcgggtcccgcacttctcac
aagtcgagcagcagcctcagaccggtgtcaccaaacccaaacgtcacggttaaatcaccg
gacagtgaggaaggaaatgagagcgcggcgagagcaaagagcgccgcgtccgttaaatct
aaagtatcgacttcatcacgcaagtccaatcgcaacggaacaacagatgaaaacgttgag
gaagtcaaagcacgacaaagtaaacctcagggccaaatgctctcacccaggagtgcatgt
ccctcgcggacacagtcccccaaagctgcatccccggtgcagcagctgttgcatgaaccc
aatgttggagacacaagagggcccagtgtcttgtccgttcactccacaatctctgcaaag
tctggcaagtccaaatgcagctgtggagcagcttcagcaaaggacgacaaggaggcggag
aaaaagcaagatgatgaggagctggaaagtgagcaggcttctgatcgagctgccagcatc
ttgtcgtcctcaaccaaaaggtcgaggagagaatcgggaggcacggagcaaccgctgagt
cgaaactcttcagggtcggtctctctcgggttgccagaagaccaagacacggcagactcg
gacagtggcaagtccagtgtcaactttcacacaaacgctgagagaaagagcagagtgaag
acaccaactcctcgtgtcccggacagcacagagccgtcttctatgaaggaaaaaagggag
gaaacggagtccatcgtgtctcaaaggtccagcgttctcaatcggccagcagtcgacatc
cctaccatccaaacgccaggagggagtcggcacaaaggggaagaagctggagagcaaaca
gacagaggagccagtgcaatttcagccaaaagcagcaagtcccacaagtcgtcttgtagc
tgtggcgtcatagcagcagcagctcaaacgcctgccagccagatcgaagcagggaaatac
cttgaaacgggaagtgtgaggtctgcttcatcgacgagcaatgtgggcacgcccaacagc
gggacgccatctgcaggttcactagcaagcgctaaagttcggagcaaatcctctgcaagt
gccagcaccaaaaaagctaatgtagctgggaattcaggagaggccatcagccgaccagga
agcaaggccgacgggaaaaaggacatgtcagacgacaagagtccctgtggtctcaggcct
ggttcggccgcttcggctcaatcagggtcaaccattaaagcgtcagagaagagcaaagga
gaggattcagtcaaagatcacaaggccaaatccagtggcagtgtcaaaacgtccagatcc
caaaagaaagacgtcaaatcctcaagcccctgtcccgtccacaaccccagaacaggcagc
aaagtggagacacatagcgagagcaccctggctcactctctgtccgccgccgacatgctg
aaggaaaccatggctgctgcgcggccacaaagtcggcaatccaaggccagtaaaaccagt
gcaaagtccagcagggaccggacggatctggaggagctggagctgtcgcctgcatgtctg
cccaacgcttcccccaatgaggtcgtcagcgactggctgcggagcattcccgcaaacagt
agtctgctggcgcttggcgatgagccgcacgaggacgtggtggaagagaaacccggagag
gaggaagcaaaggaggagggggagggtccggagaaagttgaggagcaggagacagcggag
ggagaagagaaagaggagggagttggttgtgacacagcgaaggaggagcagagttcaggt
ccggctccaggcgatgcagttaaacccaaaaccctgttgttgagcactgaccccctgccc
aggaacatgtgttcttcagccgcggtgatgaaagtcctcctgggctcctctatgggtcga
tgccgcagcctgccagaggtgtctccagtttatgggcgtagactgagcacgtcggccagg
ggtctcttggactgtttggcccagctccagctcattgagccggcaatgagccctggattt
gacccaaagaaggacgagcaccatgagggcattatgaccatccttcagtccctctggctc
actgaacccaggaacactgagaaagtggaggccatgggcgctaaggacattggcacagag
caggtgtctccgccgaggtcctcgtccggggtgggaatgagcagcggctccggcggatca
gggaaggagaatggaaaccagcctggaggtgaaccgacgcaaagcaaagcaatagaggat
gaaggagcggagaagcttgtcggagaggaaccggtgcagagcgacatccaaagtacagtc
atcccgagtccggacaagccctcgtcgtcggacaagagttcccccaccgataccgaacga
gagacgccggatgactccagctctgccacgcccccgaccgtcctgcgatcacccttgtcc
aaaagacgatcgcaagaccccgatccgggctgggtcctgcagctcctcaagaagctggag
aagcagttcatgagccactacgtcagcgccgtggcggagttcaaggtccgctgggacctg
gatgacagcctgatgctggacaccatgatcggcgagctgagggacgaggtgagccgacgc
atccagagcagcgtcgagtgcgaggtgaggaagattcagggtcgcgccggcaaaggaggg
aggatgcctcggccgccgcagaaagggaacctctccagggagtccaccatgacggagaac
aggcgtcggatactaaaggtcatgaaaaaacagtccttgataaccgccgagtccctgtgc
gacgaagagacgccgggcgagttcagcgaccagcggagcgacgacgagtactgcccctgt
gacgcttgtgtccttaagaaaatggccgcccggcctgttaaagcgaacccgcttgcggcc
gacgtaccagtgatgatggagtttgacctccttaagatattgcagctgaagaaaagccct
gcgcctgcagctgcgcccgcacaacctgcagaaggggatagcaatattacagaggaggag
gggaggagtttagaggtactgcgggaggaagaggaggaggaggaggaggaggaaacgaaa
gaggatatcaaagctcccattgttttagaggagacgattcgagaggaagatgaggaattg
gggaaagaagaggatggagatgaggcaggaaaagaggaggtagaagatgaaaaggaggaa
agtagtgcaggtgatgaggagcagggagaaacaggtggggaggaagcaggagaggaggag
atgtcagaaaatggtgaggaagaggaggtagaatgcctttgccagtgtgctgtaaatgaa
gagggagaggaggaaacagcagaagaagacgaggctgaggaaactagcgacaacacagga
gagggagagggggagacagggacaggggaggaagagagtgacaaagaggcagcagaaggt
gaaggagagaccactgaaaaagaggagggtgaggcagaggtggaagagtgtgaggtgtct
gaatttaaggaagaagaagaagaagaaacgacaggcagggaaagcggaggagaagagcgg
tccggggaaacagaggacgataacgctgcaataaaagacgactccgcggtggtggaggag
ttcggggagggagacgacagcgcctcggctgaggaggaaaagggaggagagagtgaagaa
cagggagaagaggaggaaagcgcctcttcgaagggccacgttgtgaccgcgaccgaggga
gaggaggccgacggcgaagactcggacaccgacggcaaacgcccgagcgacaccagcgtc
gaagactcgagctgcgaggcggccggcgccgcgggggaggaggacgccgtcgaagagttc
ccgcccgaggaagaagtggcgagcaagaggaaggacggcgctctcctccatcagttcacc
aggacatccgtggagtcccagcccggctccctggaggacgtcgacccgggcgcgcgccat
catccggtgaacgtcatagaagtgcccaaaatggccgccggcggatcgggcggcggcaca
gggtcggggaggaggagccgctcgccgggaagggtccaacgccgcaaacccaaagaggcc
gacgacgacctggatgacttttaa
DBGET
integrated database retrieval system
