Clinocottus analis (woolly sculpin): 137794061
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Entry
137794061 CDS
T10471
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137794061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137794061
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137794061
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
137794061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
137794061
NCBI-ProteinID:
XP_068446747
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNEPVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPHSGPNSPGEEGNDRLAL
VPVSAAMSSPVTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHDEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLTNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQII
GNKIKEGKAQRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTVALDFTREKKLLENLDYLTAPNAPCIREELCTASYDTIS
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVAFGQPVCPV
FNVWNKCLTILTGLPIPDHLEELEPDN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgctcacagcctgtgcttcggctgcgcccaccgcatcctcatctcc
cactgcgccaccaacgaacccgttcagagcatcggcgccttccagtgccccacctgcaga
tatgtcatttccctgagtccggagcgtggactcgaaggacttaagagaaacgtgaccctg
cagaacattatcgaccgagtccagcgggcctcatcttcggccgggctgcctctgccgctg
ccagcgccccacagcgggcccaactctcccggcgaggaaggcaacgaccggctggcgctg
gtgccagtcagcgccgccatgtccagccccgtcacgcccccggagccggtccagtgccag
ttctgcgagcaggacccgccgcaggacgccgtcaagacgtgcgtgacgtgcgaggtgtcg
tactgcgaggagtgcctccgggcgacgcaccccaacaagaagcccttcaccggccaccgg
ctcatcgagcccatgccggactcgcacctgcgggggctccagtgcctggagcacgacgag
gagaaggtcaacatgtactgcgtcaccgacgaccagctgatctgctcgctgtgcaagctg
gtggggaggcacagggaccaccaggtggcagcgctgagcgaccgctacgagaaactcaag
caagccctggactccaacctgaccaacttgatcaagaggaacaacgagctggagtccctg
atggggaaactgatccagacttgtcaacatgtggaggtgaacgcgtcccgccaagagggc
aagctcctggaggagtgcgacgtcctgattgacatcatccagcagcggaggcagatcatc
ggcaacaagatcaaggaggggaaggcacaaaggattcgcaagctcgcccaacagatctcc
aactgcaagcagtgcatcgagcggtcgtcggcgctcatcacgcaggccgatcagacgctg
aaggaaaccgatcacgctcgcttcctgcagaccgccaagagcatcaacgagagggtttcg
atggcgactgcatcaacccaagtgctgatcccagagatacacctgacggacacctttgac
acggtggccctggacttcaccagagagaagaagttgctggagaatctggattacctgaca
gcgccgaacgccccgtgcatcagggaggagctgtgcacggcttcgtatgacaccatctcc
gtccactggacgtctgacgacgagttcaccgtggtgtcctatgagctccagtacgccatc
ttcaccgggcagtccaacatcgccagtctgtgtaactcattggagagctggatgattgtt
cccaacatcaagcagaaccactacacagtgcacggtctgcagagcggcaccaagtacatc
tttgtcgtcaaggccattaaccaagcggggagccggagcagcgaaccggggactctgaag
accaacagccagccgttcaagctggaccccaaatctgcccacaagaagctgaaggtgtcc
cacgacaacctgacggtggagcgggacgaaaccacgtccaagaaaggccacagccaggag
cgcttcaccagccagagcagctacggcgtggtgggcaacgtctacatcgacagcggccgc
cactactgggaggctttaattggagggagcacgtggtacgccgtgggtatagcctacaaa
tcggccccgaagcacgagtggatcggcaagaactcggcctcctgggtgctgtgccgctgc
aacaactcctgggtggtccgccacaacagcaaggagctggccatcgagccctcgccccac
ctgcggcgcgtcggcgtcctgctggactacgacgccggctacgtgaccttctacgacgcc
gtgggctcccagcacctgcacacgttccacgtggccttcgggcagcccgtgtgtcccgtg
ttcaacgtgtggaacaagtgtctgacgattctcaccggtctccccatccctgaccatctg
gaggaactggagcccgacaactga
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