Clinocottus analis (woolly sculpin): 137794173
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Entry
137794173 CDS
T10471
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137794173
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137794173
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137794173
Protein phosphatases and associated proteins [BR:
cana01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137794173
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Protocadherins
137794173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
137794173
NCBI-ProteinID:
XP_068446954
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MLVGTSFLLDDQAQDRDAGQNGKLHYHLEDSDGVFSLKVEEDGRLIMLVLQTALDRETRD
MYRMALVATDCGPEPWSATATLIVTVTDVNDNCPSFDADSPRNVTVPGDSLKNMLVAQVR
ATDQDSGLNAAIVYSLSPKVSERVKQLFILDSLTGYIRLTQDLQSDKSEVLLLNVLAGGH
HCPPVDTQVIVSVLPKANQELTIKIGFIAEHQNQTMVLPENQPPTVLAVLELEGDSSFKG
SSLAIESEVPFTLSPQNGKYLLSTSKPLDYEMKSEHYIYVVVQGRSAEGSVIISSRRLIR
VLVIDVNDNAPHFFQSHYQLEVEENNQPGKLLLRVSASDADSGYNGRVTYRLDKRTSTIF
NIGPETGQLSVSAVLDREQQGVHKLTVFAQDSGSPPLESVATVSIRVLDQNDNAPAFLTP
HFIFFIHENVPPFSPVGGVGVTDLDEGENGNTELRVVNSTGPFVVDNTKGTLRTTNNLDR
ETDDRYELYLLASDHGHPFALTSAARVTIFVEDINDNQPKVILPSSNSSCQTVSPATIAG
TFVTKIYAIDEDSGLNSEVTYTVVAPESVQNSSPFRLDSRSGNITVGQQLLQKDLGMHHL
FIVVRDGGKPAPLYTTIWVNLLVNESMGPCNLDRAPTWTGTSDLDQTPSKAPIWNN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtggggaccagtttcttactggatgaccaggctcaggacagggatgctgggcaa
aacggcaagctgcattatcacctcgaagattctgatggagttttcagtttaaaagtggaa
gaagacgggcgtctcatcatgttggttttacaaacagctctggatcgggagactcgggac
atgtatcggatggcactggtggccaccgactgtggcccagagccttggagtgcgacagca
actttaatagtcacagtgacagatgttaatgacaactgtccaagctttgacgctgacagc
ccccgcaatgtcaccgtcccaggagactccctgaagaacatgctggttgctcaggtcaga
gccacagaccaagattcaggcctgaatgctgccatcgtctactccctcagtcccaaagtc
tcagagcgagtgaagcagctctttatcctcgacagcctcactgggtacatcagactaaca
caggacctccagagtgacaaatctgaggtgctgctgttgaacgtgttagctggcggccat
cactgccccccagtagacactcaggtaatcgtatccgtcctccccaaggcaaaccaagag
ctcacgatcaagatcgggttcatagcagagcatcaaaaccagactatggtgttaccagag
aaccagccccccaccgtcttagctgttttagagcttgagggtgacagcagctttaaaggc
tcatctcttgccattgagagcgaagtgcctttcactttgagcccacaaaatggcaaatat
ctgctttccacttcaaagcccctagactatgagatgaaaagtgaacattatatttatgtg
gtcgtacaggggagatcagctgaaggatctgtgatcatttcttccaggcggctgatcagg
gtgttggtgatagatgtcaatgataatgctccacatttcttccagtctcactatcaactg
gaggtggaggaaaacaaccagccggggaagttactgttgagggtctcggcgtcggacgca
gacagtggatacaacggaagggtgacctacaggctggacaaacgcacatctaccatcttt
aacattggccccgagacaggtcaactgtccgtgtcagccgttctggatagggagcagcag
ggtgtgcacaagctcactgtgtttgcacaagatagcggctcgcctcccttggagtcagtg
gccacggtatccattcgtgttctggaccagaatgacaatgcacctgcttttctaacccct
cactttatctttttcatccatgagaatgtaccaccgttctccccggtgggtggggttggg
gtcacagacctagacgagggagagaatgggaacacagagttgcgcgttgtaaacagcact
ggaccttttgttgtggataacaccaaggggacactgcgcaccaccaacaacttggaccgc
gagacagacgatcgctatgaactctacctgctggccagcgatcacggacacccgttcgct
ttgacttctgctgccagagtaactatctttgtggaggacatcaatgacaaccagccaaaa
gtgatcctccccagcagcaactcctcatgtcaaactgtttcccctgcaaccattgcaggc
acctttgtaacaaagatctatgccatcgatgaggactctgggctgaattcggaggttacc
tatactgttgtggcaccggagtcggtgcaaaacagcagcccattccggttggattcaagg
tcagggaacatcaccgtcggtcagcaactcctccagaaagacctgggaatgcatcacctg
ttcattgtggtcagagatggggggaaaccagctccactttataccactatctgggttaat
cttttggtcaatgagagcatggggccctgcaacttagacagggcgcccacctggacaggg
acttcggacttggatcaaaccccctcaaaggcccctatctggaacaattga
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