Clinocottus analis (woolly sculpin): 137794390
Help
Entry
137794390 CDS
T10471
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
137794390 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137794390 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
cana04131
]
137794390 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
cana03029
]
137794390 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137794390 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
137794390 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
137794390 (si:dkey-110c1.10)
Membrane trafficking [BR:
cana04131
]
Others
Actin-binding proteins
Myosins
137794390 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
cana03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
137794390 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
137794390 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
NPHP3_N
DUF6417
Myosin_N
AAA_16
OVT1
Motif
Other DBs
NCBI-GeneID:
137794390
NCBI-ProteinID:
XP_068447209
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MTSLELYSKGASVWIPDPDAVWVSGLLLQDYSPGEKHLLLQLSDGTEAQYPVVSPSDLPP
LGNPDILEGENDLTALSFLHEAAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGASQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRSLKLNAPEHFRYTSQGGEMQIPGTDD
LSDLERTRNAFTILGVQPDQQMELFRILSAVLYLGNVHIQASGRNSDRSYIDADDRPLAV
FSKLLGVEGPQMAHWLCHRRLAVGGELLVKPVSGQQAVEARDALAKHIYGQLFTWTVQRL
NSALRSQRGPAKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWSRIEFSDNQQCINLLEGQLGLFDLLDEECRMPKGSDESWVQKLYDQHLTSKKQP
HFQKPRMSNSAFIILHFADAVQYECDGFLGKNRDTVFEELINILKASQSELVAELFQQQG
TVPSVANGSVRSGKRAAREHKLTVGFQFRQSLQMLMDTLNNTTPHYVRCIKPNDLKEAFM
FDPRRTVQQLRACGVLETIRISAAGFPSRWTYEEFFCRYRLLLRGPQLPQQAQASCRHTL
PQLIPDADQYCFGKTKVFFRAGQVALLERLRAERLRVAAVIIQSRVRGWLGRIRHTRMCW
ATLTIQRYSRGALARRRVLMLRYTKAALVIQKTFRMVAVRQLFLMIRQASITIQAFTRGT
LARSRYRRLVAERAAVLLQARVRGWLARRSYRRVRAAVVFMQCCARRRAARRELMKLKTE
ARSVERFRELNKGMEVKLMQLQLRADQEAREGAALKETLHAERGATSAELEALRATIQKL
ESQKQEKPQPGPAISEKEVEERKKAEEKAAQEILQLTQELQALQREKDSFCKEREDLSTR
LFEQEKAQGECVDRAVSQASAGLRAELDEERRKYQGLLREFTRLEQRYDNLREMSLLTES
TKGHRRTDSNQSLSFEPLSPTPLSPIPYDFPVPEEGRRVSVTSPSSERRFSVWSNETPMD
QLMELLDVAKDPAVKMKGEDLAHAYDAVRVANKFLESQLRNQRSQKEEELEALRCQLSQA
VFGSSSAAQQQELHGLLEAREQECVRLRRELKELKNTVSLRRLLTQVFNPETSSCPAHTK
PAPVTGLLECRKRDEAKLIKNLVTDIRGDSALSLPPGLPASVLFLCVRHADCSGDQAQAR
SLCSAAVSAMKAALKKHGKDVNMTALWLKNTCLLHDLLTQHSPKQTLDSGEVAPLTADLS
DLIRTLSDLCIQAYQQLLSITVERLQNIIVPALLESETIPGLSGSAGKMGTSRKRAASDP
RTVGVDAPTLAAVLRELGDLHTALSRQDLPPALMAQAFNQLTYLISASAFNSLLLRKDMC
SWSRGMQIRYNVSLLEEWLRSRGLHTGGAVATLEHLIQAVQLLQAGKKSESDAQALVQTC
TALSSQQIVKILTLYTPHSDLEERVTLNFIRTVQGLLKGRADGQPPQLLMDVRRVFPVTF
SYSPPPVLRAEQLVIPDSLKISFLRRA
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgctggagctctacagtaagggagcaagtgtgtggattcctgacccagatgca
gtttgggtatcaggcctgctccttcaggactacagtcctggagagaaacatctactgctg
cagctctctgatggaacggaggcccaatacccagtggtgtccccctctgatctcccacca
ctggggaaccccgacatcctggagggggaaaatgatctgacggcgctgagcttcctccac
gaagctgcggtcttgcacaacctgcgcgttcggttcctggactacagcagcatctacacg
tactgcggtatcgtgttagtggccatcaatccgtatgaccagctccccatatacggagag
gaggtgatcgacgcttacagcggtcaggacatggccgacatggaacctcacatcttttct
gtggcggaggaagcttaccgcactatgaccagggaggagaagaaccagtctatcatcatc
agtggagagtctggctcggggaaaaccgtctcagccaaattcaccatgcgatactttgct
gtggttggaggagcgtcacagcagaccagcgtggaggagagggttctggcttccaaccca
ataatggagtctattgggaatgctaaaaccactcgaaatgacaacagcagtcgtttcggg
aagtacatcgagatcggcttcggcagaaaaggagacatcattggagcaaacatgaggacg
tatctactggagaagtctagggttgtcttccaagcgtcagcagagaggaactaccacatc
ttctaccagctgtgtgcttccagagagttgcctgaaatgagatccctaaaactgaacgca
cctgaacatttccgctacaccagccagggaggagagatgcagatccctggtactgatgac
ttgtcggacctggagcgcacgcgcaatgctttcaccatcctgggtgtgcagccggaccag
cagatggagctcttcaggatcctgtcagctgttctgtacctgggcaacgtccacatccaa
gccagtgggagaaattctgatcggagttatattgatgcagacgaccgacctctggctgtc
ttctccaagctgttgggagtagaaggacctcagatggcccactggctgtgtcatcgcaga
ctggctgtagggggagagctgctggtcaaacccgtgtccggccagcaggccgtagaagcc
agagatgcgctggccaaacatatctacggccagctgtttacctggactgtccagaggctg
aactcggctctgcgctcacagagagggccggccaaatccttcataggggtgctcgacatc
tacgggtttgagaccttcgaccggaacagtttcgagcagttctgcatcaattatgccaat
gaaaaactccaacagcagttcaacaggcatgtgttccacttggagcaggaggagtacgtc
cgggaggagctggcctggagcaggattgagttcagtgataatcaacagtgcatcaatctc
ttagagggacaactgggcctcttcgatctgttggacgaggagtgcaggatgcccaagggt
tcagatgagagctgggtgcagaagctgtatgatcaacacctgacgagcaagaaacagcct
cacttccagaaacctcgcatgtccaacagcgcctttatcattctgcactttgctgacgcg
gtgcaatatgaatgtgatggctttttaggcaagaatcgagatacggtcttcgaggagctc
attaacatcctcaaagcaagtcagtctgagttggtggctgaattgttccagcagcaggga
accgttccctctgtggctaatggaagtgtccgctcggggaaaagagccgccagagagcac
aagctgacggtgggcttccagttccgtcagtccttgcagatgctaatggacactctgaac
aacaccactcctcactatgtccgctgcattaaacccaacgacctcaaagaagcgttcatg
tttgacccccgcaggacggtgcagcagttgagagcttgtggggtgctggagacgattcgc
atcagtgctgcaggttttccatccaggtggacgtacgaggagttcttctgcaggtaccgc
cttctgcttcgaggtccccagcttccgcagcaggcccaggcctcgtgcagacacacactc
cctcagctcatcccagacgcagaccagtactgcttcggaaagaccaaggtgttcttccgg
gccggtcaggtggctctcctggagaggctgcgagctgagaggctgcgcgtggccgccgtg
atcatccagagccgcgtcagagggtggctgggccggattagacacaccaggatgtgctgg
gcgacgctcaccatacagagatacagcagaggagctctggccaggcgacgggtcctgatg
ctgcgctacaccaaggctgcgctagtaatccagaagactttccgcatggtggcggtcaga
cagctgttcctcatgatccgacaggccagcatcaccatccaggccttcaccaggggcaca
ttggcgcgcagcagatacagacggctggtggcggagcgggctgctgtgttgcttcaggcg
agagtgcgcggctggctggcgaggcggtcgtacaggcgcgtgcgcgcggcggtggtgttc
atgcagtgctgcgcgcgccgcagggccgccaggagagagctgatgaagctgaagaccgag
gcccgctcggtggagaggttcagagagctcaacaagggcatggaggtcaaactgatgcag
ctgcagttgagagcagaccaagaggccagggagggtgcggctttgaaagagaccctgcat
gcggagcgaggggccaccagcgctgagctggaggctttgagggcgacgatacagaaacta
gagagccagaaacaggagaagcctcagcccggccccgccatcagcgagaaggaggtggag
gaaagaaagaaagctgaggagaaagcggcccaggagatccttcagctcacacaagagttg
caagccctccagagagaaaaggacagtttttgcaaagagagagaggatctctctactcgc
ttgtttgaacaagaaaaagcacaaggagagtgtgtggaccgggctgtgtctcaggcgagt
gcaggtctgagggcggagctggatgaggagaggagaaagtatcagggtctcctgagagag
ttcaccagactggagcaaagatacgacaacctcagggagatgagtctgctcaccgagagc
accaagggccacagaaggacggactccaaccagagtctgagcttcgagcctctctcgccc
actccgctgtcacccatcccatatgacttccccgtcccggaggaggggcgcagggtcagc
gtgacgtctccctcctctgagaggagattctcagtgtggagcaacgaaacgccaatggac
cagttgatggagctgctggacgtggccaaagacccggcagtgaagatgaaaggggaggac
ctggcacacgcctacgacgccgtacgagttgccaacaagtttctggagagccagttgcgt
aaccagcgcagtcagaaggaggaggagctggaggctctgaggtgccaacttagtcaagcg
gtctttggttcttcgtctgctgcgcagcaacaggaactgcacggactactcgaggccaga
gagcaagagtgtgtcagattgaggcgagagctgaaggagcttaaaaacaccgtctcactc
agacgactactgacgcaggttttcaacccggagacgtcctcctgtccggcgcacacgaag
ccagcgcccgtcactggtttgctggagtgtaggaagagagacgaagccaagctcatcaag
aacctcgtcacagacatccgtggtgacagcgccctgtcgctgcctcctggcctgcctgcc
agcgtgctcttcctgtgcgttcgtcatgccgactgcagcggggaccaagcgcaggctcgc
tcgctctgtagcgcggctgtcagtgctatgaaggcagctctaaagaaacatggtaaagat
gtaaatatgacagctctgtggctgaaaaacacctgtctgctgcacgacctgttgacccag
cactccccaaaacagacccttgactcaggcgaagtggctccactcactgctgatctgagc
gacctgatccgcaccctgagtgacctctgtatccaggcctatcagcagctactgtccatc
actgtagaacgtctgcagaacatcatagtccctgctctgctggagagcgagaccatccca
gggttgtctggctcggcggggaaaatgggaacgtccagaaagcgagcggcgtcggacccc
aggaccgtgggagtcgatgccccgactctggcggcggtgctgagggagctgggagacctt
cacaccgctctgtcccgtcaggatctgcccccagcgctgatggcgcaggccttcaaccag
ctcacctacctcatctccgcctccgccttcaacagcctcctgctgaggaaagacatgtgc
agctggagccgtggcatgcaaatacgctacaacgtgagtcttttggaggagtggctgcgg
agccgaggtctgcacacagggggcgctgtggccacgctggagcacctcatccaggcagtt
cagctgctgcaagccgggaaaaagagcgagtcggacgcacaggccctcgttcagacctgc
actgccctgtccagccagcagattgtgaagattctgaccctctacacgccccacagtgac
cttgaggaaagagtcacgctaaatttcatccgtactgtccaggggcttctcaaaggccgc
gccgacggtcagcctccgcagctcctcatggatgtgaggcgagtgtttccagtcacattt
tcctactcgcctccccccgtcctccgtgccgagcagttagtcatcccggactccctgaag
atctcttttctccgcagagcctag
DBGET
integrated database retrieval system
